RNA–Protein interactions for RNA: ENST00000470443.5

PABPC4-210, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-210ENST00000470443 SEC24BO95487 1268 aa11.5□□□□□ -0.57
PABPC4-210ENST00000470443 GSE1Q14687 1217 aa11.5□□□□□ -0.57
PABPC4-210ENST00000470443 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
PABPC4-210ENST00000470443 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-210ENST00000470443 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-210ENST00000470443 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
PABPC4-210ENST00000470443 CUX1P39880 1505 aa11.46□□□□□ -0.57
PABPC4-210ENST00000470443 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
PABPC4-210ENST00000470443 ERCC6L2Q5T890 1561 aa11.44□□□□□ -0.58
PABPC4-210ENST00000470443 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
PABPC4-210ENST00000470443 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
PABPC4-210ENST00000470443 GAPVD1Q14C86 1478 aa11.43□□□□□ -0.58
PABPC4-210ENST00000470443 MAGI1Q96QZ7 1491 aaPredicted RBP11.43□□□□□ -0.58
PABPC4-210ENST00000470443 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
PABPC4-210ENST00000470443 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
PABPC4-210ENST00000470443 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
PABPC4-210ENST00000470443 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
PABPC4-210ENST00000470443 WDR97A6NE52 1622 aa11.4□□□□□ -0.58
PABPC4-210ENST00000470443 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
PABPC4-210ENST00000470443 PLCG2P16885 1265 aa11.38□□□□□ -0.59
PABPC4-210ENST00000470443 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
PABPC4-210ENST00000470443 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
PABPC4-210ENST00000470443 POTEMA6NI47 508 aa11.36□□□□□ -0.59
PABPC4-210ENST00000470443 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
PABPC4-210ENST00000470443 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
PABPC4-210ENST00000470443 ABCA5Q8WWZ7 1642 aa11.33□□□□□ -0.6
PABPC4-210ENST00000470443 ABCA10Q8WWZ4 1543 aa11.32□□□□□ -0.6
PABPC4-210ENST00000470443 CEP170Q5SW79 1584 aa11.32□□□□□ -0.6
PABPC4-210ENST00000470443 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
PABPC4-210ENST00000470443 GRIN2AQ12879 1464 aa11.3□□□□□ -0.6
PABPC4-210ENST00000470443 NUP160Q12769 1436 aa11.28□□□□□ -0.6
PABPC4-210ENST00000470443 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
PABPC4-210ENST00000470443 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
PABPC4-210ENST00000470443 PSEN1P49768 467 aa11.27□□□□□ -0.61
PABPC4-210ENST00000470443 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
PABPC4-210ENST00000470443 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
PABPC4-210ENST00000470443 SHROOM2Q13796 1616 aa11.26□□□□□ -0.61
PABPC4-210ENST00000470443 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
PABPC4-210ENST00000470443 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
PABPC4-210ENST00000470443 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
PABPC4-210ENST00000470443 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
PABPC4-210ENST00000470443 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
PABPC4-210ENST00000470443 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
PABPC4-210ENST00000470443 PRG4Q92954 1404 aaPredicted RBP11.21□□□□□ -0.61
PABPC4-210ENST00000470443 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
PABPC4-210ENST00000470443 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
PABPC4-210ENST00000470443 WRNQ14191 1432 aaPredicted RBP eCLIP11.19□□□□□ -0.62
PABPC4-210ENST00000470443 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
PABPC4-210ENST00000470443 JPH4Q96JJ6 628 aa11.19□□□□□ -0.62
PABPC4-210ENST00000470443 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
PABPC4-210ENST00000470443 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
PABPC4-210ENST00000470443 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
PABPC4-210ENST00000470443 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
PABPC4-210ENST00000470443 SUPT5HO00267 1087 aaKnown RBP11.16□□□□□ -0.62
PABPC4-210ENST00000470443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■□□□□ 10.5
PABPC4-210ENST00000470443 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
PABPC4-210ENST00000470443 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
PABPC4-210ENST00000470443 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
PABPC4-210ENST00000470443 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
PABPC4-210ENST00000470443 DIP2BQ9P265 1576 aa11.13□□□□□ -0.63
PABPC4-210ENST00000470443 ADCY10Q96PN6 1610 aa11.13□□□□□ -0.63
PABPC4-210ENST00000470443 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
PABPC4-210ENST00000470443 RUSC2Q8N2Y8 1516 aa11.11□□□□□ -0.63
PABPC4-210ENST00000470443 MAPKBP1O60336 1514 aa11.1□□□□□ -0.63
PABPC4-210ENST00000470443 ST18O60284 1047 aa11.1□□□□□ -0.63
PABPC4-210ENST00000470443 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
PABPC4-210ENST00000470443 SNPHO15079 494 aa11.09□□□□□ -0.63
PABPC4-210ENST00000470443 TSPOAP1O95153 1857 aa11.08□□□□□ -0.64
PABPC4-210ENST00000470443 KDM6BO15054 1643 aa11.07□□□□□ -0.64
PABPC4-210ENST00000470443 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
PABPC4-210ENST00000470443 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
PABPC4-210ENST00000470443 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
PABPC4-210ENST00000470443 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
PABPC4-210ENST00000470443 IGF1RP08069 1367 aa11.03□□□□□ -0.64
PABPC4-210ENST00000470443 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
PABPC4-210ENST00000470443 KIAA0586Q9BVV6 1533 aa11.01□□□□□ -0.65
PABPC4-210ENST00000470443 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
PABPC4-210ENST00000470443 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
PABPC4-210ENST00000470443 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
PABPC4-210ENST00000470443 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
PABPC4-210ENST00000470443 G3V3G9 751 aa10.99□□□□□ -0.65
PABPC4-210ENST00000470443 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
PABPC4-210ENST00000470443 EFCAB3Q8N7B9 438 aa10.99□□□□□ -0.65
PABPC4-210ENST00000470443 PTPRGP23470 1445 aa10.98□□□□□ -0.65
PABPC4-210ENST00000470443 ADGRL1O94910 1474 aa10.96□□□□□ -0.65
PABPC4-210ENST00000470443 ASXL2Q76L83 1435 aa10.95□□□□□ -0.66
PABPC4-210ENST00000470443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
PABPC4-210ENST00000470443 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
PABPC4-210ENST00000470443 SOX12O15370 315 aa10.94□□□□□ -0.66
PABPC4-210ENST00000470443 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
PABPC4-210ENST00000470443 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
PABPC4-210ENST00000470443 CUL7Q14999 1698 aa10.92□□□□□ -0.66
PABPC4-210ENST00000470443 GLI2P10070 1586 aa10.92□□□□□ -0.66
PABPC4-210ENST00000470443 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
PABPC4-210ENST00000470443 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.66
PABPC4-210ENST00000470443 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
PABPC4-210ENST00000470443 PLB1Q6P1J6 1458 aa10.9□□□□□ -0.66
PABPC4-210ENST00000470443 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
PABPC4-210ENST00000470443 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
PABPC4-210ENST00000470443 EPRSP07814 1512 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms