RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CCDC7Q96M83 1385 aa12.73□□□□□ -0.37
NHLRC3-203ENST00000470258 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
NHLRC3-203ENST00000470258 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
NHLRC3-203ENST00000470258 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
NHLRC3-203ENST00000470258 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
NHLRC3-203ENST00000470258 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
NHLRC3-203ENST00000470258 FOXD1Q16676 465 aa12.71□□□□□ -0.38
NHLRC3-203ENST00000470258 SKAP1Q86WV1 359 aa12.7□□□□□ -0.38
NHLRC3-203ENST00000470258 NFKBIBQ15653 356 aa12.69□□□□□ -0.38
NHLRC3-203ENST00000470258 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
NHLRC3-203ENST00000470258 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
NHLRC3-203ENST00000470258 CHD1O14646 1710 aa12.68□□□□□ -0.38
NHLRC3-203ENST00000470258 BACH2Q9BYV9 841 aa12.68□□□□□ -0.38
NHLRC3-203ENST00000470258 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
NHLRC3-203ENST00000470258 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
NHLRC3-203ENST00000470258 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
NHLRC3-203ENST00000470258 MAP3K1Q13233 1512 aa12.67□□□□□ -0.38
NHLRC3-203ENST00000470258 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
NHLRC3-203ENST00000470258 GRIN2BQ13224 1484 aa12.66□□□□□ -0.38
NHLRC3-203ENST00000470258 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
NHLRC3-203ENST00000470258 PTPRKQ15262 1439 aa12.65□□□□□ -0.38
NHLRC3-203ENST00000470258 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
NHLRC3-203ENST00000470258 ZNF326Q5BKZ1 582 aaKnown RBP12.65□□□□□ -0.38
NHLRC3-203ENST00000470258 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
NHLRC3-203ENST00000470258 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.39
NHLRC3-203ENST00000470258 RRP1P56182 461 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 PKNOX2Q96KN3 472 aa12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 FGD6Q6ZV73 1430 aa12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
NHLRC3-203ENST00000470258 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
NHLRC3-203ENST00000470258 PCF11O94913 1555 aaKnown RBP12.63□□□□□ -0.39
NHLRC3-203ENST00000470258 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
NHLRC3-203ENST00000470258 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
NHLRC3-203ENST00000470258 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
NHLRC3-203ENST00000470258 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
NHLRC3-203ENST00000470258 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
NHLRC3-203ENST00000470258 NAIPQ13075 1403 aa12.61□□□□□ -0.39
NHLRC3-203ENST00000470258 NBPF8Q3BBV2 869 aa12.61□□□□□ -0.39
NHLRC3-203ENST00000470258 RCAN3Q9UKA8 241 aa12.61□□□□□ -0.39
NHLRC3-203ENST00000470258 IGF1RP08069 1367 aa12.61□□□□□ -0.39
NHLRC3-203ENST00000470258 ARXQ96QS3 562 aa12.6□□□□□ -0.39
NHLRC3-203ENST00000470258 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
NHLRC3-203ENST00000470258 PLIN1O60240 522 aa12.6□□□□□ -0.39
NHLRC3-203ENST00000470258 CUL7Q14999 1698 aa12.6□□□□□ -0.39
NHLRC3-203ENST00000470258 FRAT2O75474 233 aaPredicted RBP12.59□□□□□ -0.39
NHLRC3-203ENST00000470258 MS4A1P11836 297 aa12.59□□□□□ -0.39
NHLRC3-203ENST00000470258 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
NHLRC3-203ENST00000470258 MPHOSPH9Q99550 1183 aa12.57□□□□□ -0.4
NHLRC3-203ENST00000470258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
NHLRC3-203ENST00000470258 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
NHLRC3-203ENST00000470258 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
NHLRC3-203ENST00000470258 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
NHLRC3-203ENST00000470258 FAM43AQ8N2R8 423 aa12.56□□□□□ -0.4
NHLRC3-203ENST00000470258 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
NHLRC3-203ENST00000470258 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
NHLRC3-203ENST00000470258 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
NHLRC3-203ENST00000470258 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
NHLRC3-203ENST00000470258 GRIN2AQ12879 1464 aa12.52□□□□□ -0.41
NHLRC3-203ENST00000470258 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
NHLRC3-203ENST00000470258 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
NHLRC3-203ENST00000470258 DHX29Q7Z478 1369 aaKnown RBP12.51□□□□□ -0.41
NHLRC3-203ENST00000470258 FYCO1Q9BQS8 1478 aa12.51□□□□□ -0.41
NHLRC3-203ENST00000470258 RGS3P49796 1198 aa12.5□□□□□ -0.41
NHLRC3-203ENST00000470258 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
NHLRC3-203ENST00000470258 CASKIN1Q8WXD9 1431 aa12.5□□□□□ -0.41
NHLRC3-203ENST00000470258 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
NHLRC3-203ENST00000470258 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
NHLRC3-203ENST00000470258 POGKQ9P215 609 aa12.48□□□□□ -0.41
NHLRC3-203ENST00000470258 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
NHLRC3-203ENST00000470258 RRAGDQ9NQL2 400 aaPredicted RBP12.47□□□□□ -0.41
NHLRC3-203ENST00000470258 NUP160Q12769 1436 aa12.47□□□□□ -0.41
NHLRC3-203ENST00000470258 ZMYND15Q9H091 742 aa12.47□□□□□ -0.41
NHLRC3-203ENST00000470258 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.41
NHLRC3-203ENST00000470258 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
NHLRC3-203ENST00000470258 USP47Q96K76 1375 aa12.45□□□□□ -0.42
NHLRC3-203ENST00000470258 SLKQ9H2G2 1235 aaPredicted RBP12.45□□□□□ -0.42
NHLRC3-203ENST00000470258 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
NHLRC3-203ENST00000470258 FAM161AQ3B820 660 aa12.44□□□□□ -0.42
NHLRC3-203ENST00000470258 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
NHLRC3-203ENST00000470258 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
NHLRC3-203ENST00000470258 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
NHLRC3-203ENST00000470258 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
NHLRC3-203ENST00000470258 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
NHLRC3-203ENST00000470258 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
NHLRC3-203ENST00000470258 ARID4BQ4LE39 1312 aaPredicted RBP12.42□□□□□ -0.42
NHLRC3-203ENST00000470258 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
NHLRC3-203ENST00000470258 KDM6BO15054 1643 aa12.41□□□□□ -0.42
NHLRC3-203ENST00000470258 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
NHLRC3-203ENST00000470258 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
NHLRC3-203ENST00000470258 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
NHLRC3-203ENST00000470258 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
NHLRC3-203ENST00000470258 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
NHLRC3-203ENST00000470258 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
NHLRC3-203ENST00000470258 C8orf34Q49A92 452 aa12.4□□□□□ -0.42
NHLRC3-203ENST00000470258 ANKRD30BQ9BXX2 1392 aa12.4□□□□□ -0.42
NHLRC3-203ENST00000470258 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
NHLRC3-203ENST00000470258 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms