RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 ABCC1P33527 1531 aa13.25□□□□□ -0.29
TRAPPC3-206ENST00000469757 LRRC9Q6ZRR7 1453 aa13.24□□□□□ -0.29
TRAPPC3-206ENST00000469757 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
TRAPPC3-206ENST00000469757 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC3-206ENST00000469757 ARHGAP5Q13017 1502 aa13.23□□□□□ -0.29
TRAPPC3-206ENST00000469757 ARHGEF40Q8TER5 1519 aa13.23□□□□□ -0.29
TRAPPC3-206ENST00000469757 KDM5CP41229 1560 aa13.23□□□□□ -0.29
TRAPPC3-206ENST00000469757 POGZQ7Z3K3 1410 aa13.22□□□□□ -0.29
TRAPPC3-206ENST00000469757 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
TRAPPC3-206ENST00000469757 GPATCH8Q9UKJ3 1502 aaKnown RBP13.22□□□□□ -0.29
TRAPPC3-206ENST00000469757 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
TRAPPC3-206ENST00000469757 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
TRAPPC3-206ENST00000469757 DENND4BO75064 1496 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC3-206ENST00000469757 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
TRAPPC3-206ENST00000469757 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
TRAPPC3-206ENST00000469757 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
TRAPPC3-206ENST00000469757 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
TRAPPC3-206ENST00000469757 PLEKHH2Q8IVE3 1493 aa13.16□□□□□ -0.3
TRAPPC3-206ENST00000469757 SYCP2Q9BX26 1530 aa13.15□□□□□ -0.3
TRAPPC3-206ENST00000469757 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
TRAPPC3-206ENST00000469757 CCNB3Q8WWL7 1395 aa13.15□□□□□ -0.3
TRAPPC3-206ENST00000469757 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
TRAPPC3-206ENST00000469757 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
TRAPPC3-206ENST00000469757 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
TRAPPC3-206ENST00000469757 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
TRAPPC3-206ENST00000469757 REREQ9P2R6 1566 aa13.13□□□□□ -0.31
TRAPPC3-206ENST00000469757 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-206ENST00000469757 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
TRAPPC3-206ENST00000469757 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
TRAPPC3-206ENST00000469757 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
TRAPPC3-206ENST00000469757 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
TRAPPC3-206ENST00000469757 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
TRAPPC3-206ENST00000469757 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
TRAPPC3-206ENST00000469757 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
TRAPPC3-206ENST00000469757 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
TRAPPC3-206ENST00000469757 RAPGEF3O95398 923 aa13.09□□□□□ -0.31
TRAPPC3-206ENST00000469757 TRAPPC8Q9Y2L5 1435 aa13.09□□□□□ -0.31
TRAPPC3-206ENST00000469757 KIDINS220Q9ULH0 1771 aa13.09□□□□□ -0.31
TRAPPC3-206ENST00000469757 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
TRAPPC3-206ENST00000469757 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC3-206ENST00000469757 YEATS2Q9ULM3 1422 aa13.07□□□□□ -0.32
TRAPPC3-206ENST00000469757 ATP7AQ04656 1500 aa13.07□□□□□ -0.32
TRAPPC3-206ENST00000469757 PLXNC1O60486 1568 aa13.07□□□□□ -0.32
TRAPPC3-206ENST00000469757 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
TRAPPC3-206ENST00000469757 CFDP1Q9UEE9 299 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-206ENST00000469757 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
TRAPPC3-206ENST00000469757 CCDC141Q6ZP82 1450 aa13.05□□□□□ -0.32
TRAPPC3-206ENST00000469757 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
TRAPPC3-206ENST00000469757 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
TRAPPC3-206ENST00000469757 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
TRAPPC3-206ENST00000469757 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
TRAPPC3-206ENST00000469757 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
TRAPPC3-206ENST00000469757 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
TRAPPC3-206ENST00000469757 AGLP35573 1532 aa13.03□□□□□ -0.32
TRAPPC3-206ENST00000469757 ATP10AO60312 1499 aa13.03□□□□□ -0.32
TRAPPC3-206ENST00000469757 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
TRAPPC3-206ENST00000469757 APLP2Q06481 763 aa13.02□□□□□ -0.33
TRAPPC3-206ENST00000469757 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.33
TRAPPC3-206ENST00000469757 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.33
TRAPPC3-206ENST00000469757 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-206ENST00000469757 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC3-206ENST00000469757 AFAP1Q8N556 730 aa12.99□□□□□ -0.33
TRAPPC3-206ENST00000469757 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC3-206ENST00000469757 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
TRAPPC3-206ENST00000469757 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
TRAPPC3-206ENST00000469757 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAPPC3-206ENST00000469757 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
TRAPPC3-206ENST00000469757 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
TRAPPC3-206ENST00000469757 FER1L4A9Z1Z3 1794 aa12.94□□□□□ -0.34
TRAPPC3-206ENST00000469757 FAM135AQ9P2D6 1515 aa12.94□□□□□ -0.34
TRAPPC3-206ENST00000469757 A2MP01023 1474 aa12.94□□□□□ -0.34
TRAPPC3-206ENST00000469757 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
TRAPPC3-206ENST00000469757 DAPK1P53355 1430 aa12.94□□□□□ -0.34
TRAPPC3-206ENST00000469757 ABCC5O15440 1437 aa12.93□□□□□ -0.34
TRAPPC3-206ENST00000469757 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
TRAPPC3-206ENST00000469757 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
TRAPPC3-206ENST00000469757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC3-206ENST00000469757 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
TRAPPC3-206ENST00000469757 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-206ENST00000469757 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-206ENST00000469757 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
TRAPPC3-206ENST00000469757 PTPRMP28827 1452 aa12.89□□□□□ -0.35
TRAPPC3-206ENST00000469757 DEPDC5O75140 1603 aa12.88□□□□□ -0.35
TRAPPC3-206ENST00000469757 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
TRAPPC3-206ENST00000469757 DHX29Q7Z478 1369 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-206ENST00000469757 PRDM15P57071 1507 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-206ENST00000469757 ERBINQ96RT1 1412 aa12.87□□□□□ -0.35
TRAPPC3-206ENST00000469757 ZC3H13Q5T200 1668 aaKnown RBP12.86□□□□□ -0.35
TRAPPC3-206ENST00000469757 CNTLNQ9NXG0 1405 aa12.86□□□□□ -0.35
TRAPPC3-206ENST00000469757 KDM5DQ9BY66 1539 aa12.84□□□□□ -0.35
TRAPPC3-206ENST00000469757 ARID4BQ4LE39 1312 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-206ENST00000469757 C3P01024 1663 aa12.83□□□□□ -0.35
TRAPPC3-206ENST00000469757 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
TRAPPC3-206ENST00000469757 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
TRAPPC3-206ENST00000469757 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
TRAPPC3-206ENST00000469757 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
TRAPPC3-206ENST00000469757 TSPY4P0CV99 314 aa12.82□□□□□ -0.36
TRAPPC3-206ENST00000469757 TSPY10P0CW01 314 aa12.82□□□□□ -0.36
TRAPPC3-206ENST00000469757 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-206ENST00000469757 MYT1LQ9UL68 1186 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms