RNA–Protein interactions for RNA: ENST00000469108.1

CDK5-202, Transcript of cyclin dependent kinase 5, humanhuman

TSL 3

Gene CDK5, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-202ENST00000469108 ARHGAP5Q13017 1502 aa35.79■■■■□ 3.32
CDK5-202ENST00000469108 ZMYM4Q5VZL5 1548 aa35.75■■■■□ 3.31
CDK5-202ENST00000469108 EFCAB2Q5VUJ9 269 aa35.74■■■■□ 3.31
CDK5-202ENST00000469108 ARHGEF40Q8TER5 1519 aa35.72■■■■□ 3.31
CDK5-202ENST00000469108 SCAPERQ9BY12 1400 aa35.71■■■■□ 3.31
CDK5-202ENST00000469108 POGZQ7Z3K3 1410 aa35.7■■■■□ 3.31
CDK5-202ENST00000469108 VPS8Q8N3P4 1428 aa35.68■■■■□ 3.3
CDK5-202ENST00000469108 EHBP1L1Q8N3D4 1523 aa35.67■■■■□ 3.3
CDK5-202ENST00000469108 MTUS2Q5JR59 1369 aa35.65■■■■□ 3.3
CDK5-202ENST00000469108 ZFYVE16Q7Z3T8 1539 aa35.62■■■■□ 3.29
CDK5-202ENST00000469108 TIAM1Q13009 1591 aa35.61■■■■□ 3.29
CDK5-202ENST00000469108 ABCC1P33527 1531 aa35.61■■■■□ 3.29
CDK5-202ENST00000469108 MAGI2Q86UL8 1455 aa35.6■■■■□ 3.29
CDK5-202ENST00000469108 ITSN2Q9NZM3 1697 aa35.6■■■■□ 3.29
CDK5-202ENST00000469108 GPATCH8Q9UKJ3 1502 aaKnown RBP35.59■■■■□ 3.29
CDK5-202ENST00000469108 ZNF518AQ6AHZ1 1483 aa35.58■■■■□ 3.29
CDK5-202ENST00000469108 KDM5CP41229 1560 aa35.57■■■■□ 3.28
CDK5-202ENST00000469108 YEATS2Q9ULM3 1422 aa35.54■■■■□ 3.28
CDK5-202ENST00000469108 SAMD9LQ8IVG5 1584 aa35.54■■■■□ 3.28
CDK5-202ENST00000469108 SUPT6HQ7KZ85 1726 aaKnown RBP35.52■■■■□ 3.28
CDK5-202ENST00000469108 BCORL1Q5H9F3 1711 aa35.51■■■■□ 3.27
CDK5-202ENST00000469108 ARHGEF12Q9NZN5 1544 aa35.51■■■■□ 3.27
CDK5-202ENST00000469108 CCNB3Q8WWL7 1395 aa35.51■■■■□ 3.27
CDK5-202ENST00000469108 SIGLEC1Q9BZZ2 1709 aa35.5■■■■□ 3.27
CDK5-202ENST00000469108 ADAMTSL3P82987 1691 aa35.49■■■■□ 3.27
CDK5-202ENST00000469108 HECW2Q9P2P5 1572 aa35.49■■■■□ 3.27
CDK5-202ENST00000469108 MAP3K1Q13233 1512 aa35.45■■■■□ 3.27
CDK5-202ENST00000469108 AFAP1Q8N556 730 aa35.44■■■■□ 3.26
CDK5-202ENST00000469108 TRAPPC8Q9Y2L5 1435 aa35.43■■■■□ 3.26
CDK5-202ENST00000469108 SYCP2Q9BX26 1530 aa35.42■■■■□ 3.26
CDK5-202ENST00000469108 NCOA2Q15596 1464 aa35.41■■■■□ 3.26
CDK5-202ENST00000469108 LRRC9Q6ZRR7 1453 aa35.41■■■■□ 3.26
CDK5-202ENST00000469108 CFDP1Q9UEE9 299 aaPredicted RBP35.4■■■■□ 3.26
CDK5-202ENST00000469108 ZNF777Q9ULD5 760 aaPredicted RBP35.4■■■■□ 3.26
CDK5-202ENST00000469108 ATP10AO60312 1499 aa35.4■■■■□ 3.26
CDK5-202ENST00000469108 ARID4BQ4LE39 1312 aaPredicted RBP35.39■■■■□ 3.26
CDK5-202ENST00000469108 MLH3Q9UHC1 1453 aa35.39■■■■□ 3.26
CDK5-202ENST00000469108 PLEKHH2Q8IVE3 1493 aa35.38■■■■□ 3.25
CDK5-202ENST00000469108 DIP2CQ9Y2E4 1556 aa35.38■■■■□ 3.25
CDK5-202ENST00000469108 ABCA6Q8N139 1617 aa35.37■■■■□ 3.25
CDK5-202ENST00000469108 MADDQ8WXG6 1647 aa35.36■■■■□ 3.25
CDK5-202ENST00000469108 C9orf84Q5VXU9 1444 aa35.36■■■■□ 3.25
CDK5-202ENST00000469108 KIDINS220Q9ULH0 1771 aa35.36■■■■□ 3.25
CDK5-202ENST00000469108 KIAA1107Q9UPP5 1409 aa35.35■■■■□ 3.25
CDK5-202ENST00000469108 REREQ9P2R6 1566 aa35.31■■■■□ 3.24
CDK5-202ENST00000469108 RIMS1Q86UR5 1692 aaKnown RBP35.27■■■■□ 3.24
CDK5-202ENST00000469108 HNRNPMP52272 730 aaKnown RBP eCLIP35.26■■■■□ 3.24
CDK5-202ENST00000469108 MYT1LQ9UL68 1186 aa35.26■■■■□ 3.24
CDK5-202ENST00000469108 INO80Q9ULG1 1556 aaPredicted RBP35.25■■■■□ 3.23
CDK5-202ENST00000469108 PTPRMP28827 1452 aa35.25■■■■□ 3.23
CDK5-202ENST00000469108 KANK4Q5T7N3 995 aaPredicted RBP35.25■■■■□ 3.23
CDK5-202ENST00000469108 FER1L4A9Z1Z3 1794 aa35.24■■■■□ 3.23
CDK5-202ENST00000469108 ZNF644Q9H582 1327 aaPredicted RBP35.22■■■■□ 3.23
CDK5-202ENST00000469108 ATP7AQ04656 1500 aa35.21■■■■□ 3.23
CDK5-202ENST00000469108 CAMSAP2Q08AD1 1489 aa35.2■■■■□ 3.23
CDK5-202ENST00000469108 MBD5Q9P267 1494 aa35.2■■■■□ 3.23
CDK5-202ENST00000469108 SPAG9O60271 1321 aaKnown RBP35.17■■■■□ 3.22
CDK5-202ENST00000469108 APLP2Q06481 763 aa35.15■■■■□ 3.22
CDK5-202ENST00000469108 AGLP35573 1532 aa35.15■■■■□ 3.22
CDK5-202ENST00000469108 MLECQ14165 292 aa35.13■■■■□ 3.21
CDK5-202ENST00000469108 MYOM3Q5VTT5 1437 aa35.09■■■■□ 3.21
CDK5-202ENST00000469108 ADGBQ8N7X0 1667 aa35.09■■■■□ 3.21
CDK5-202ENST00000469108 CCDC141Q6ZP82 1450 aa35.09■■■■□ 3.21
CDK5-202ENST00000469108 ARHGEF5Q12774 1597 aa35.08■■■■□ 3.21
CDK5-202ENST00000469108 PLXNC1O60486 1568 aa35.07■■■■□ 3.2
CDK5-202ENST00000469108 MIA2Q96PC5 1412 aa35.04■■■■□ 3.2
CDK5-202ENST00000469108 RTEL1-TNFRSF6BF6WH68 1400 aa35.03■■■■□ 3.2
CDK5-202ENST00000469108 A2MP01023 1474 aa35■■■■□ 3.19
CDK5-202ENST00000469108 RSPH4AQ5TD94 716 aa34.98■■■■□ 3.19
CDK5-202ENST00000469108 PTPN23Q9H3S7 1636 aa34.92■■■■□ 3.18
CDK5-202ENST00000469108 MAST1Q9Y2H9 1570 aa34.91■■■■□ 3.18
CDK5-202ENST00000469108 C3P01024 1663 aa34.89■■■■□ 3.18
CDK5-202ENST00000469108 CROCC2H7BZ55 1655 aa34.87■■■■□ 3.17
CDK5-202ENST00000469108 PLPPR3Q6T4P5 718 aa34.86■■■■□ 3.17
CDK5-202ENST00000469108 MROH2AA6NES4 1674 aa34.86■■■■□ 3.17
CDK5-202ENST00000469108 LMTK3Q96Q04 1460 aa34.85■■■■□ 3.17
CDK5-202ENST00000469108 FGD6Q6ZV73 1430 aa34.85■■■■□ 3.17
CDK5-202ENST00000469108 TSPY4P0CV99 314 aa34.83■■■■□ 3.17
CDK5-202ENST00000469108 TSPY10P0CW01 314 aa34.83■■■■□ 3.17
CDK5-202ENST00000469108 DHX29Q7Z478 1369 aaKnown RBP34.83■■■■□ 3.17
CDK5-202ENST00000469108 CNTLNQ9NXG0 1405 aa34.82■■■■□ 3.17
CDK5-202ENST00000469108 TCOF1Q13428 1488 aaKnown RBP34.82■■■■□ 3.16
CDK5-202ENST00000469108 PREX1Q8TCU6 1659 aa34.82■■■■□ 3.16
CDK5-202ENST00000469108 CLTCQ00610 1675 aaKnown RBP34.81■■■■□ 3.16
CDK5-202ENST00000469108 ESF1Q9H501 851 aaKnown RBP34.79■■■■□ 3.16
CDK5-202ENST00000469108 DNMT1P26358 1616 aaKnown RBP34.78■■■■□ 3.16
CDK5-202ENST00000469108 CEBPAP49715 358 aaPredicted RBP34.77■■■■□ 3.16
CDK5-202ENST00000469108 SHANK2Q9UPX8 1470 aa34.75■■■■□ 3.15
CDK5-202ENST00000469108 SETD1BQ9UPS6 1966 aaKnown RBP34.74■■■■□ 3.15
CDK5-202ENST00000469108 ABCC5O15440 1437 aa34.72■■■■□ 3.15
CDK5-202ENST00000469108 GGT6Q6P531 493 aa34.7■■■■□ 3.15
CDK5-202ENST00000469108 DAPK1P53355 1430 aa34.7■■■■□ 3.15
CDK5-202ENST00000469108 EIF2AK4Q9P2K8 1649 aaKnown RBP34.69■■■■□ 3.14
CDK5-202ENST00000469108 PPP6R1Q9UPN7 881 aa34.66■■■■□ 3.14
CDK5-202ENST00000469108 RNF17Q9BXT8 1623 aaKnown RBP34.66■■■■□ 3.14
CDK5-202ENST00000469108 FAM135AQ9P2D6 1515 aa34.65■■■■□ 3.14
CDK5-202ENST00000469108 ZMYM3Q14202 1370 aa34.64■■■■□ 3.14
CDK5-202ENST00000469108 KIF3BO15066 747 aa34.64■■■■□ 3.14
CDK5-202ENST00000469108 DUOX2Q9NRD8 1548 aa34.63■■■■□ 3.13
CDK5-202ENST00000469108 KDM5DQ9BY66 1539 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms