RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 FRMPD1Q5SYB0 1578 aa15.07■□□□□ 0
SDCCAG3-208ENST00000466579 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
SDCCAG3-208ENST00000466579 MTUS2Q5JR59 1369 aa15.05■□□□□ -0
SDCCAG3-208ENST00000466579 RICTORQ6R327 1708 aa15.05■□□□□ -0
SDCCAG3-208ENST00000466579 EFCAB2Q5VUJ9 269 aa15.04■□□□□ -0
SDCCAG3-208ENST00000466579 GPATCH8Q9UKJ3 1502 aaKnown RBP15.03■□□□□ -0
SDCCAG3-208ENST00000466579 DENND4BO75064 1496 aaPredicted RBP15.03■□□□□ -0
SDCCAG3-208ENST00000466579 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
SDCCAG3-208ENST00000466579 ZMYM4Q5VZL5 1548 aa15.02□□□□□ -0.01
SDCCAG3-208ENST00000466579 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
SDCCAG3-208ENST00000466579 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
SDCCAG3-208ENST00000466579 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
SDCCAG3-208ENST00000466579 RAPGEF3O95398 923 aa15□□□□□ -0.01
SDCCAG3-208ENST00000466579 POGZQ7Z3K3 1410 aa15□□□□□ -0.01
SDCCAG3-208ENST00000466579 SCAPERQ9BY12 1400 aa14.99□□□□□ -0.01
SDCCAG3-208ENST00000466579 ABCC1P33527 1531 aa14.98□□□□□ -0.01
SDCCAG3-208ENST00000466579 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
SDCCAG3-208ENST00000466579 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
SDCCAG3-208ENST00000466579 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
SDCCAG3-208ENST00000466579 ITSN2Q9NZM3 1697 aa14.97□□□□□ -0.01
SDCCAG3-208ENST00000466579 KDM5CP41229 1560 aa14.96□□□□□ -0.01
SDCCAG3-208ENST00000466579 SAMD9LQ8IVG5 1584 aa14.96□□□□□ -0.01
SDCCAG3-208ENST00000466579 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.02
SDCCAG3-208ENST00000466579 ARHGEF40Q8TER5 1519 aa14.95□□□□□ -0.02
SDCCAG3-208ENST00000466579 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
SDCCAG3-208ENST00000466579 KIAA1107Q9UPP5 1409 aa14.94□□□□□ -0.02
SDCCAG3-208ENST00000466579 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
SDCCAG3-208ENST00000466579 PLEKHH2Q8IVE3 1493 aa14.93□□□□□ -0.02
SDCCAG3-208ENST00000466579 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
SDCCAG3-208ENST00000466579 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
SDCCAG3-208ENST00000466579 ZFYVE16Q7Z3T8 1539 aa14.91□□□□□ -0.02
SDCCAG3-208ENST00000466579 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
SDCCAG3-208ENST00000466579 MLH3Q9UHC1 1453 aa14.9□□□□□ -0.02
SDCCAG3-208ENST00000466579 SYCP2Q9BX26 1530 aa14.89□□□□□ -0.03
SDCCAG3-208ENST00000466579 AFAP1Q8N556 730 aa14.89□□□□□ -0.03
SDCCAG3-208ENST00000466579 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
SDCCAG3-208ENST00000466579 HECW2Q9P2P5 1572 aa14.89□□□□□ -0.03
SDCCAG3-208ENST00000466579 APLP2Q06481 763 aa14.88□□□□□ -0.03
SDCCAG3-208ENST00000466579 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
SDCCAG3-208ENST00000466579 KDM4FA0A1W2PPD8 638 aa14.87□□□□□ -0.03
SDCCAG3-208ENST00000466579 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
SDCCAG3-208ENST00000466579 MIA2Q96PC5 1412 aa14.86□□□□□ -0.03
SDCCAG3-208ENST00000466579 REREQ9P2R6 1566 aa14.85□□□□□ -0.03
SDCCAG3-208ENST00000466579 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
SDCCAG3-208ENST00000466579 ATP10AO60312 1499 aa14.85□□□□□ -0.03
SDCCAG3-208ENST00000466579 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
SDCCAG3-208ENST00000466579 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
SDCCAG3-208ENST00000466579 CAMSAP2Q08AD1 1489 aa14.84□□□□□ -0.03
SDCCAG3-208ENST00000466579 SIGLEC1Q9BZZ2 1709 aa14.84□□□□□ -0.03
SDCCAG3-208ENST00000466579 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
SDCCAG3-208ENST00000466579 DIP2CQ9Y2E4 1556 aa14.84□□□□□ -0.03
SDCCAG3-208ENST00000466579 ARHGEF5Q12774 1597 aa14.83□□□□□ -0.04
SDCCAG3-208ENST00000466579 INO80Q9ULG1 1556 aaPredicted RBP14.83□□□□□ -0.04
SDCCAG3-208ENST00000466579 ABCA6Q8N139 1617 aa14.83□□□□□ -0.04
SDCCAG3-208ENST00000466579 C9orf84Q5VXU9 1444 aa14.83□□□□□ -0.04
SDCCAG3-208ENST00000466579 ADAMTSL3P82987 1691 aa14.82□□□□□ -0.04
SDCCAG3-208ENST00000466579 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
SDCCAG3-208ENST00000466579 RSPH4AQ5TD94 716 aa14.81□□□□□ -0.04
SDCCAG3-208ENST00000466579 RTEL1-TNFRSF6BF6WH68 1400 aa14.8□□□□□ -0.04
SDCCAG3-208ENST00000466579 CCDC141Q6ZP82 1450 aa14.8□□□□□ -0.04
SDCCAG3-208ENST00000466579 ATP7AQ04656 1500 aa14.8□□□□□ -0.04
SDCCAG3-208ENST00000466579 SPAG9O60271 1321 aaKnown RBP14.79□□□□□ -0.04
SDCCAG3-208ENST00000466579 AGLP35573 1532 aa14.79□□□□□ -0.04
SDCCAG3-208ENST00000466579 TCOF1Q13428 1488 aaKnown RBP14.78□□□□□ -0.04
SDCCAG3-208ENST00000466579 FGD6Q6ZV73 1430 aa14.78□□□□□ -0.04
SDCCAG3-208ENST00000466579 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.04
SDCCAG3-208ENST00000466579 PLXNC1O60486 1568 aa14.76□□□□□ -0.05
SDCCAG3-208ENST00000466579 MAST1Q9Y2H9 1570 aa14.76□□□□□ -0.05
SDCCAG3-208ENST00000466579 ADGBQ8N7X0 1667 aa14.74□□□□□ -0.05
SDCCAG3-208ENST00000466579 MADDQ8WXG6 1647 aa14.73□□□□□ -0.05
SDCCAG3-208ENST00000466579 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
SDCCAG3-208ENST00000466579 A2MP01023 1474 aa14.72□□□□□ -0.05
SDCCAG3-208ENST00000466579 CROCC2H7BZ55 1655 aa14.71□□□□□ -0.05
SDCCAG3-208ENST00000466579 SHANK2Q9UPX8 1470 aa14.71□□□□□ -0.05
SDCCAG3-208ENST00000466579 DNMT1P26358 1616 aaKnown RBP14.71□□□□□ -0.05
SDCCAG3-208ENST00000466579 MYT1LQ9UL68 1186 aa14.71□□□□□ -0.05
SDCCAG3-208ENST00000466579 ABCC5O15440 1437 aa14.7□□□□□ -0.06
SDCCAG3-208ENST00000466579 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
SDCCAG3-208ENST00000466579 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
SDCCAG3-208ENST00000466579 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
SDCCAG3-208ENST00000466579 DHX29Q7Z478 1369 aaKnown RBP14.69□□□□□ -0.06
SDCCAG3-208ENST00000466579 PTPRMP28827 1452 aa14.69□□□□□ -0.06
SDCCAG3-208ENST00000466579 MSH5O43196 834 aa14.68□□□□□ -0.06
SDCCAG3-208ENST00000466579 DAPK1P53355 1430 aa14.67□□□□□ -0.06
SDCCAG3-208ENST00000466579 RIMS1Q86UR5 1692 aaKnown RBP14.67□□□□□ -0.06
SDCCAG3-208ENST00000466579 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.66□□□□□ -0.06
SDCCAG3-208ENST00000466579 MLECQ14165 292 aa14.63□□□□□ -0.07
SDCCAG3-208ENST00000466579 ADGRL2O95490 1459 aa14.63□□□□□ -0.07
SDCCAG3-208ENST00000466579 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
SDCCAG3-208ENST00000466579 CNTLNQ9NXG0 1405 aa14.62□□□□□ -0.07
SDCCAG3-208ENST00000466579 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
SDCCAG3-208ENST00000466579 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
SDCCAG3-208ENST00000466579 FAM135AQ9P2D6 1515 aa14.61□□□□□ -0.07
SDCCAG3-208ENST00000466579 RRBP1Q9P2E9 1410 aaKnown RBP14.61□□□□□ -0.07
SDCCAG3-208ENST00000466579 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
SDCCAG3-208ENST00000466579 RNF17Q9BXT8 1623 aaKnown RBP14.6□□□□□ -0.07
SDCCAG3-208ENST00000466579 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
SDCCAG3-208ENST00000466579 NCOA1Q15788 1441 aa14.59□□□□□ -0.07
SDCCAG3-208ENST00000466579 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
SDCCAG3-208ENST00000466579 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms