RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 CFDP1Q9UEE9 299 aaPredicted RBP31.26■■■□□ 2.59
PPP1R3F-203ENST00000466508 CAMSAP2Q08AD1 1489 aa31.26■■■□□ 2.59
PPP1R3F-203ENST00000466508 NAIPQ13075 1403 aa31.25■■■□□ 2.59
PPP1R3F-203ENST00000466508 AKNAQ7Z591 1439 aa31.25■■■□□ 2.59
PPP1R3F-203ENST00000466508 GCC2Q8IWJ2 1684 aa31.24■■■□□ 2.59
PPP1R3F-203ENST00000466508 DAPK1P53355 1430 aa31.23■■■□□ 2.59
PPP1R3F-203ENST00000466508 ZNF644Q9H582 1327 aaPredicted RBP31.23■■■□□ 2.59
PPP1R3F-203ENST00000466508 ABCC5O15440 1437 aa31.19■■■□□ 2.58
PPP1R3F-203ENST00000466508 PREX2Q70Z35 1606 aa31.17■■■□□ 2.58
PPP1R3F-203ENST00000466508 MAPKBP1O60336 1514 aa31.14■■■□□ 2.58
PPP1R3F-203ENST00000466508 CDC42BPBQ9Y5S2 1711 aa31.14■■■□□ 2.58
PPP1R3F-203ENST00000466508 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
PPP1R3F-203ENST00000466508 CROCC2H7BZ55 1655 aa31.14■■■□□ 2.58
PPP1R3F-203ENST00000466508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.14■■■□□ 2.58
PPP1R3F-203ENST00000466508 CHIC2Q9UKJ5 165 aa31.13■■■□□ 2.57
PPP1R3F-203ENST00000466508 ROCK1Q13464 1354 aa31.13■■■□□ 2.57
PPP1R3F-203ENST00000466508 NPM1P06748 294 aaKnown RBP eCLIP31.1■■■□□ 2.57
PPP1R3F-203ENST00000466508 ZNF777Q9ULD5 760 aaPredicted RBP31.1■■■□□ 2.57
PPP1R3F-203ENST00000466508 MYO5CQ9NQX4 1742 aa31.09■■■□□ 2.57
PPP1R3F-203ENST00000466508 RRP7BPQ9NSQ0 103 aa31.08■■■□□ 2.57
PPP1R3F-203ENST00000466508 ADGBQ8N7X0 1667 aa31.08■■■□□ 2.57
PPP1R3F-203ENST00000466508 SAMD9LQ8IVG5 1584 aa31.02■■■□□ 2.56
PPP1R3F-203ENST00000466508 KDM6BO15054 1643 aa31.01■■■□□ 2.55
PPP1R3F-203ENST00000466508 ARHGEF5Q12774 1597 aa31.01■■■□□ 2.55
PPP1R3F-203ENST00000466508 ADGRL2O95490 1459 aa31■■■□□ 2.55
PPP1R3F-203ENST00000466508 SHANK2Q9UPX8 1470 aa30.99■■■□□ 2.55
PPP1R3F-203ENST00000466508 ARHGAP5Q13017 1502 aa30.99■■■□□ 2.55
PPP1R3F-203ENST00000466508 WDR7Q9Y4E6 1490 aa30.98■■■□□ 2.55
PPP1R3F-203ENST00000466508 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
PPP1R3F-203ENST00000466508 NCOA1Q15788 1441 aa30.95■■■□□ 2.55
PPP1R3F-203ENST00000466508 MBD5Q9P267 1494 aa30.94■■■□□ 2.54
PPP1R3F-203ENST00000466508 PLCH2O75038 1416 aa30.91■■■□□ 2.54
PPP1R3F-203ENST00000466508 ACIN1Q9UKV3 1341 aaKnown RBP30.9■■■□□ 2.54
PPP1R3F-203ENST00000466508 C9orf84Q5VXU9 1444 aa30.9■■■□□ 2.54
PPP1R3F-203ENST00000466508 CCDC141Q6ZP82 1450 aa30.89■■■□□ 2.54
PPP1R3F-203ENST00000466508 ANKRD30AQ9BXX3 1397 aa30.89■■■□□ 2.54
PPP1R3F-203ENST00000466508 PLEKHH2Q8IVE3 1493 aa30.88■■■□□ 2.53
PPP1R3F-203ENST00000466508 SYCP2Q9BX26 1530 aa30.88■■■□□ 2.53
PPP1R3F-203ENST00000466508 ARAP3Q8WWN8 1544 aa30.87■■■□□ 2.53
PPP1R3F-203ENST00000466508 ASXL2Q76L83 1435 aa30.86■■■□□ 2.53
PPP1R3F-203ENST00000466508 HNRNPMP52272 730 aaKnown RBP eCLIP30.86■■■□□ 2.53
PPP1R3F-203ENST00000466508 ABCA9Q8IUA7 1624 aa30.85■■■□□ 2.53
PPP1R3F-203ENST00000466508 KIAA1107Q9UPP5 1409 aa30.85■■■□□ 2.53
PPP1R3F-203ENST00000466508 RSPH4AQ5TD94 716 aa30.84■■■□□ 2.53
PPP1R3F-203ENST00000466508 TSPY4P0CV99 314 aa30.83■■■□□ 2.53
PPP1R3F-203ENST00000466508 TSPY10P0CW01 314 aa30.83■■■□□ 2.53
PPP1R3F-203ENST00000466508 KIF13AQ9H1H9 1805 aa30.8■■■□□ 2.52
PPP1R3F-203ENST00000466508 MAST1Q9Y2H9 1570 aa30.79■■■□□ 2.52
PPP1R3F-203ENST00000466508 FAM69CQ0P6D2 419 aa30.79■■■□□ 2.52
PPP1R3F-203ENST00000466508 TRIM52Q96A61 297 aa30.79■■■□□ 2.52
PPP1R3F-203ENST00000466508 EFCAB2Q5VUJ9 269 aa30.78■■■□□ 2.52
PPP1R3F-203ENST00000466508 ABCC1P33527 1531 aa30.77■■■□□ 2.52
PPP1R3F-203ENST00000466508 DENND4BO75064 1496 aaPredicted RBP30.77■■■□□ 2.52
PPP1R3F-203ENST00000466508 SIN3AQ96ST3 1273 aa30.76■■■□□ 2.51
PPP1R3F-203ENST00000466508 ANKRD50Q9ULJ7 1429 aa30.75■■■□□ 2.51
PPP1R3F-203ENST00000466508 ARHGEF12Q9NZN5 1544 aa30.73■■■□□ 2.51
PPP1R3F-203ENST00000466508 DIP2BQ9P265 1576 aa30.73■■■□□ 2.51
PPP1R3F-203ENST00000466508 TIMELESSQ9UNS1 1208 aa30.72■■■□□ 2.51
PPP1R3F-203ENST00000466508 KIF15Q9NS87 1388 aa30.71■■■□□ 2.51
PPP1R3F-203ENST00000466508 MPHOSPH9Q99550 1183 aa30.7■■■□□ 2.51
PPP1R3F-203ENST00000466508 NEUROD1Q13562 356 aa30.7■■■□□ 2.5
PPP1R3F-203ENST00000466508 PLXNC1O60486 1568 aa30.68■■■□□ 2.5
PPP1R3F-203ENST00000466508 FANCAO15360 1455 aa30.66■■■□□ 2.5
PPP1R3F-203ENST00000466508 ZNF316A6NFI3 1004 aaPredicted RBP30.64■■■□□ 2.5
PPP1R3F-203ENST00000466508 PZPP20742 1482 aa30.64■■■□□ 2.49
PPP1R3F-203ENST00000466508 TRAPPC8Q9Y2L5 1435 aa30.6■■■□□ 2.49
PPP1R3F-203ENST00000466508 KDM5DQ9BY66 1539 aa30.58■■■□□ 2.49
PPP1R3F-203ENST00000466508 SLC4A1APQ9BWU0 796 aaKnown RBP30.58■■■□□ 2.49
PPP1R3F-203ENST00000466508 TONSLQ96HA7 1378 aa30.56■■■□□ 2.48
PPP1R3F-203ENST00000466508 GLI2P10070 1586 aa30.54■■■□□ 2.48
PPP1R3F-203ENST00000466508 ADGRL1O94910 1474 aa30.53■■■□□ 2.48
PPP1R3F-203ENST00000466508 DUOX2Q9NRD8 1548 aa30.53■■■□□ 2.48
PPP1R3F-203ENST00000466508 CFAP74Q9C0B2 1584 aa30.53■■■□□ 2.48
PPP1R3F-203ENST00000466508 ANKRD30BQ9BXX2 1392 aa30.52■■■□□ 2.48
PPP1R3F-203ENST00000466508 TSPOAP1O95153 1857 aa30.51■■■□□ 2.48
PPP1R3F-203ENST00000466508 ZFYVE16Q7Z3T8 1539 aa30.51■■■□□ 2.47
PPP1R3F-203ENST00000466508 RTEL1-TNFRSF6BF6WH68 1400 aa30.51■■■□□ 2.47
PPP1R3F-203ENST00000466508 CD109Q6YHK3 1445 aa30.51■■■□□ 2.47
PPP1R3F-203ENST00000466508 FOXD1Q16676 465 aa30.5■■■□□ 2.47
PPP1R3F-203ENST00000466508 NUP155O75694 1391 aa30.49■■■□□ 2.47
PPP1R3F-203ENST00000466508 UNC13BO14795 1591 aa30.49■■■□□ 2.47
PPP1R3F-203ENST00000466508 PPP1R15AO75807 674 aaPredicted RBP30.46■■■□□ 2.47
PPP1R3F-203ENST00000466508 ERBINQ96RT1 1412 aa30.46■■■□□ 2.47
PPP1R3F-203ENST00000466508 INO80Q9ULG1 1556 aaPredicted RBP30.46■■■□□ 2.47
PPP1R3F-203ENST00000466508 SPAG9O60271 1321 aaKnown RBP30.46■■■□□ 2.47
PPP1R3F-203ENST00000466508 SCAPERQ9BY12 1400 aa30.46■■■□□ 2.47
PPP1R3F-203ENST00000466508 AFAP1Q8N556 730 aa30.44■■■□□ 2.46
PPP1R3F-203ENST00000466508 RPRD2Q5VT52 1461 aaKnown RBP30.44■■■□□ 2.46
PPP1R3F-203ENST00000466508 ATP7AQ04656 1500 aa30.42■■■□□ 2.46
PPP1R3F-203ENST00000466508 FAM135AQ9P2D6 1515 aa30.4■■■□□ 2.46
PPP1R3F-203ENST00000466508 PKD2Q13563 968 aa30.4■■■□□ 2.46
PPP1R3F-203ENST00000466508 MAP3K4Q9Y6R4 1608 aa30.4■■■□□ 2.46
PPP1R3F-203ENST00000466508 DIEXFQ68CQ4 756 aaKnown RBP30.39■■■□□ 2.46
PPP1R3F-203ENST00000466508 MAGI2Q86UL8 1455 aa30.37■■■□□ 2.45
PPP1R3F-203ENST00000466508 ZNF518AQ6AHZ1 1483 aa30.37■■■□□ 2.45
PPP1R3F-203ENST00000466508 IQGAP3Q86VI3 1631 aa30.36■■■□□ 2.45
PPP1R3F-203ENST00000466508 PPRC1Q5VV67 1664 aaKnown RBP30.35■■■□□ 2.45
PPP1R3F-203ENST00000466508 NEO1Q92859 1461 aa30.34■■■□□ 2.45
PPP1R3F-203ENST00000466508 KDM5CP41229 1560 aa30.31■■■□□ 2.44
PPP1R3F-203ENST00000466508 KIDINS220Q9ULH0 1771 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms