RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ARHGAP5Q13017 1502 aa41.09■■■■■ 4.17
SMC4-206ENST00000465903 DENND4BO75064 1496 aaPredicted RBP41.09■■■■■ 4.17
SMC4-206ENST00000465903 EHBP1L1Q8N3D4 1523 aa41.08■■■■■ 4.17
SMC4-206ENST00000465903 ADGRL1O94910 1474 aa41.05■■■■■ 4.16
SMC4-206ENST00000465903 SCAPERQ9BY12 1400 aa41.02■■■■■ 4.16
SMC4-206ENST00000465903 GPATCH8Q9UKJ3 1502 aaKnown RBP41.02■■■■■ 4.16
SMC4-206ENST00000465903 MAP3K1Q13233 1512 aa40.99■■■■■ 4.15
SMC4-206ENST00000465903 LRRC9Q6ZRR7 1453 aa40.92■■■■■ 4.14
SMC4-206ENST00000465903 CCNB3Q8WWL7 1395 aa40.92■■■■■ 4.14
SMC4-206ENST00000465903 POGZQ7Z3K3 1410 aa40.92■■■■■ 4.14
SMC4-206ENST00000465903 SUPT6HQ7KZ85 1726 aaKnown RBP40.91■■■■■ 4.14
SMC4-206ENST00000465903 ZMYM4Q5VZL5 1548 aa40.89■■■■■ 4.14
SMC4-206ENST00000465903 KANK4Q5T7N3 995 aaPredicted RBP40.89■■■■■ 4.14
SMC4-206ENST00000465903 ARHGEF12Q9NZN5 1544 aa40.87■■■■■ 4.13
SMC4-206ENST00000465903 NCOA2Q15596 1464 aa40.86■■■■■ 4.13
SMC4-206ENST00000465903 ABCC1P33527 1531 aa40.86■■■■■ 4.13
SMC4-206ENST00000465903 SAMD9LQ8IVG5 1584 aa40.85■■■■■ 4.13
SMC4-206ENST00000465903 KDM4FA0A1W2PPD8 638 aa40.84■■■■■ 4.13
SMC4-206ENST00000465903 ITSN2Q9NZM3 1697 aa40.84■■■■■ 4.13
SMC4-206ENST00000465903 CFDP1Q9UEE9 299 aaPredicted RBP40.82■■■■■ 4.13
SMC4-206ENST00000465903 ZNF777Q9ULD5 760 aaPredicted RBP40.82■■■■■ 4.13
SMC4-206ENST00000465903 AFAP1Q8N556 730 aa40.79■■■■■ 4.12
SMC4-206ENST00000465903 ARHGEF40Q8TER5 1519 aa40.77■■■■■ 4.12
SMC4-206ENST00000465903 ZNF518AQ6AHZ1 1483 aa40.77■■■■■ 4.12
SMC4-206ENST00000465903 MAGI2Q86UL8 1455 aa40.77■■■■■ 4.12
SMC4-206ENST00000465903 KDM5CP41229 1560 aa40.77■■■■■ 4.12
SMC4-206ENST00000465903 TRAPPC8Q9Y2L5 1435 aa40.76■■■■■ 4.12
SMC4-206ENST00000465903 YEATS2Q9ULM3 1422 aa40.76■■■■■ 4.11
SMC4-206ENST00000465903 APLP2Q06481 763 aa40.75■■■■■ 4.11
SMC4-206ENST00000465903 ZFYVE16Q7Z3T8 1539 aa40.74■■■■■ 4.11
SMC4-206ENST00000465903 SYCP2Q9BX26 1530 aa40.7■■■■■ 4.11
SMC4-206ENST00000465903 KIAA1107Q9UPP5 1409 aa40.68■■■■■ 4.1
SMC4-206ENST00000465903 HNRNPMP52272 730 aaKnown RBP eCLIP40.68■■■■■ 4.12e-9■□□□□ 8.7
SMC4-206ENST00000465903 ZNF644Q9H582 1327 aaPredicted RBP40.67■■■■■ 4.1
SMC4-206ENST00000465903 PLEKHH2Q8IVE3 1493 aa40.66■■■■■ 4.1
SMC4-206ENST00000465903 AEBP2Q6ZN18 517 aaPredicted RBP40.66■■■■■ 4.1
SMC4-206ENST00000465903 HECW2Q9P2P5 1572 aa40.64■■■■■ 4.1
SMC4-206ENST00000465903 MLH3Q9UHC1 1453 aa40.63■■■■■ 4.09
SMC4-206ENST00000465903 SIGLEC1Q9BZZ2 1709 aa40.62■■■■■ 4.09
SMC4-206ENST00000465903 KIDINS220Q9ULH0 1771 aa40.58■■■■■ 4.09
SMC4-206ENST00000465903 ATP10AO60312 1499 aa40.57■■■■■ 4.08
SMC4-206ENST00000465903 MBD5Q9P267 1494 aa40.56■■■■■ 4.08
SMC4-206ENST00000465903 DIP2CQ9Y2E4 1556 aa40.53■■■■■ 4.08
SMC4-206ENST00000465903 MYT1LQ9UL68 1186 aa40.53■■■■■ 4.08
SMC4-206ENST00000465903 BCORL1Q5H9F3 1711 aa40.53■■■■■ 4.08
SMC4-206ENST00000465903 ABCA6Q8N139 1617 aa40.53■■■■■ 4.08
SMC4-206ENST00000465903 CAMSAP2Q08AD1 1489 aa40.52■■■■■ 4.08
SMC4-206ENST00000465903 MYOM3Q5VTT5 1437 aa40.51■■■■■ 4.08
SMC4-206ENST00000465903 ARID4BQ4LE39 1312 aaPredicted RBP40.51■■■■■ 4.08
SMC4-206ENST00000465903 C9orf84Q5VXU9 1444 aa40.5■■■■■ 4.07
SMC4-206ENST00000465903 ADAMTSL3P82987 1691 aa40.5■■■■■ 4.07
SMC4-206ENST00000465903 SPAG9O60271 1321 aaKnown RBP40.46■■■■■ 4.07
SMC4-206ENST00000465903 MIA2Q96PC5 1412 aa40.45■■■■■ 4.07
SMC4-206ENST00000465903 INO80Q9ULG1 1556 aaPredicted RBP40.43■■■■■ 4.06
SMC4-206ENST00000465903 REREQ9P2R6 1566 aa40.42■■■■■ 4.06
SMC4-206ENST00000465903 ATP7AQ04656 1500 aa40.41■■■■■ 4.06
SMC4-206ENST00000465903 ARHGEF5Q12774 1597 aa40.37■■■■■ 4.05
SMC4-206ENST00000465903 RSPH4AQ5TD94 716 aa40.36■■■■■ 4.05
SMC4-206ENST00000465903 CCDC141Q6ZP82 1450 aa40.36■■■■■ 4.05
SMC4-206ENST00000465903 MADDQ8WXG6 1647 aa40.34■■■■■ 4.05
SMC4-206ENST00000465903 MLECQ14165 292 aa40.3■■■■■ 4.04
SMC4-206ENST00000465903 RTEL1-TNFRSF6BF6WH68 1400 aa40.3■■■■■ 4.04
SMC4-206ENST00000465903 PTPN23Q9H3S7 1636 aa40.3■■■■■ 4.04
SMC4-206ENST00000465903 AGLP35573 1532 aa40.29■■■■■ 4.04
SMC4-206ENST00000465903 FGD6Q6ZV73 1430 aa40.27■■■■■ 4.04
SMC4-206ENST00000465903 RIMS1Q86UR5 1692 aaKnown RBP40.24■■■■■ 4.03
SMC4-206ENST00000465903 ADGBQ8N7X0 1667 aa40.24■■■■■ 4.03
SMC4-206ENST00000465903 PTPRMP28827 1452 aa40.23■■■■■ 4.03
SMC4-206ENST00000465903 TCOF1Q13428 1488 aaKnown RBP40.21■■■■■ 4.03
SMC4-206ENST00000465903 FER1L4A9Z1Z3 1794 aa40.21■■■■■ 4.03
SMC4-206ENST00000465903 A2MP01023 1474 aa40.2■■■■■ 4.03
SMC4-206ENST00000465903 PLXNC1O60486 1568 aa40.19■■■■■ 4.02
SMC4-206ENST00000465903 TSPY4P0CV99 314 aa40.19■■■■■ 4.02
SMC4-206ENST00000465903 TSPY10P0CW01 314 aa40.19■■■■■ 4.02
SMC4-206ENST00000465903 PPARGC1BQ86YN6 1023 aaKnown RBP40.18■■■■■ 4.02
SMC4-206ENST00000465903 MAST1Q9Y2H9 1570 aa40.17■■■■■ 4.02
SMC4-206ENST00000465903 ABCC5O15440 1437 aa40.1■■■■■ 4.01
SMC4-206ENST00000465903 DHX29Q7Z478 1369 aaKnown RBP40.09■■■■■ 4.01
SMC4-206ENST00000465903 CROCC2H7BZ55 1655 aa40.08■■■■■ 4.01
SMC4-206ENST00000465903 DNMT1P26358 1616 aaKnown RBP40.08■■■■■ 4.01
SMC4-206ENST00000465903 DAPK1P53355 1430 aa40.04■■■■■ 4
SMC4-206ENST00000465903 SHANK2Q9UPX8 1470 aa40■■■■□ 3.99
SMC4-206ENST00000465903 FAM50AQ14320 339 aaKnown RBP39.97■■■■□ 3.99
SMC4-206ENST00000465903 GGT6Q6P531 493 aa39.93■■■■□ 3.98
SMC4-206ENST00000465903 PLPPR3Q6T4P5 718 aa39.93■■■■□ 3.98
SMC4-206ENST00000465903 KIF3BO15066 747 aa39.9■■■■□ 3.98
SMC4-206ENST00000465903 CEBPAP49715 358 aaPredicted RBP39.9■■■■□ 3.98
SMC4-206ENST00000465903 C3P01024 1663 aa39.89■■■■□ 3.98
SMC4-206ENST00000465903 ESF1Q9H501 851 aaKnown RBP39.88■■■■□ 3.97
SMC4-206ENST00000465903 CHIC2Q9UKJ5 165 aa39.87■■■■□ 3.97
SMC4-206ENST00000465903 CNTLNQ9NXG0 1405 aa39.86■■■■□ 3.97
SMC4-206ENST00000465903 CLTCQ00610 1675 aaKnown RBP39.85■■■■□ 3.97
SMC4-206ENST00000465903 MROH2AA6NES4 1674 aa39.84■■■■□ 3.97
SMC4-206ENST00000465903 PPP6R1Q9UPN7 881 aa39.84■■■■□ 3.97
SMC4-206ENST00000465903 DUOX2Q9NRD8 1548 aa39.84■■■■□ 3.97
SMC4-206ENST00000465903 RRP7BPQ9NSQ0 103 aa39.83■■■■□ 3.97
SMC4-206ENST00000465903 KIF15Q9NS87 1388 aa39.82■■■■□ 3.96
SMC4-206ENST00000465903 EIF2AK4Q9P2K8 1649 aaKnown RBP39.81■■■■□ 3.96
SMC4-206ENST00000465903 SETD1BQ9UPS6 1966 aaKnown RBP39.79■■■■□ 3.96
SMC4-206ENST00000465903 PTPRKQ15262 1439 aa39.79■■■■□ 3.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms