RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 ANP32CO43423 234 aa9.01□□□□□ -0.97
SIK3-207ENST00000465421 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
SIK3-207ENST00000465421 HFM1A2PYH4 1435 aa9.01□□□□□ -0.97
SIK3-207ENST00000465421 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
SIK3-207ENST00000465421 CROCC2H7BZ55 1655 aa8.99□□□□□ -0.97
SIK3-207ENST00000465421 NUP160Q12769 1436 aa8.99□□□□□ -0.97
SIK3-207ENST00000465421 ATP1B4Q9UN42 357 aaPredicted RBP8.99□□□□□ -0.97
SIK3-207ENST00000465421 MIA2Q96PC5 1412 aa8.99□□□□□ -0.97
SIK3-207ENST00000465421 CHD1O14646 1710 aa8.98□□□□□ -0.97
SIK3-207ENST00000465421 SIN3AQ96ST3 1273 aa8.98□□□□□ -0.97
SIK3-207ENST00000465421 ITSN2Q9NZM3 1697 aa8.98□□□□□ -0.97
SIK3-207ENST00000465421 DNMT1P26358 1616 aaKnown RBP8.98□□□□□ -0.97
SIK3-207ENST00000465421 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
SIK3-207ENST00000465421 PPP4R2Q9NY27 417 aa8.97□□□□□ -0.97
SIK3-207ENST00000465421 CNGB1Q14028 1251 aaPredicted RBP8.96□□□□□ -0.97
SIK3-207ENST00000465421 PTPRKQ15262 1439 aa8.96□□□□□ -0.97
SIK3-207ENST00000465421 KDM5BQ9UGL1 1544 aa8.96□□□□□ -0.98
SIK3-207ENST00000465421 NOP58Q9Y2X3 529 aaKnown RBP8.95□□□□□ -0.98
SIK3-207ENST00000465421 NUP153P49790 1475 aaKnown RBP8.95□□□□□ -0.98
SIK3-207ENST00000465421 ABCA8O94911 1581 aa8.95□□□□□ -0.98
SIK3-207ENST00000465421 SHROOM2Q13796 1616 aa8.94□□□□□ -0.98
SIK3-207ENST00000465421 NAIPQ13075 1403 aa8.94□□□□□ -0.98
SIK3-207ENST00000465421 UACAQ9BZF9 1416 aa8.94□□□□□ -0.98
SIK3-207ENST00000465421 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
SIK3-207ENST00000465421 SALL2Q9Y467 1007 aaPredicted RBP8.93□□□□□ -0.98
SIK3-207ENST00000465421 CDK13Q14004 1512 aaKnown RBP8.93□□□□□ -0.98
SIK3-207ENST00000465421 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
SIK3-207ENST00000465421 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
SIK3-207ENST00000465421 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
SIK3-207ENST00000465421 FAM50AQ14320 339 aaKnown RBP8.92□□□□□ -0.98
SIK3-207ENST00000465421 CHMP7Q8WUX9 453 aaPredicted RBP8.92□□□□□ -0.98
SIK3-207ENST00000465421 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
SIK3-207ENST00000465421 DENND4BO75064 1496 aaPredicted RBP8.91□□□□□ -0.98
SIK3-207ENST00000465421 ROCK1Q13464 1354 aa8.91□□□□□ -0.98
SIK3-207ENST00000465421 SENP3-EIF4A1A0A087X0R7 540 aa8.9□□□□□ -0.98
SIK3-207ENST00000465421 KDM6BO15054 1643 aa8.9□□□□□ -0.98
SIK3-207ENST00000465421 NBR1Q14596 966 aa8.89□□□□□ -0.99
SIK3-207ENST00000465421 ADGRL2O95490 1459 aa8.89□□□□□ -0.99
SIK3-207ENST00000465421 CDC42BPAQ5VT25 1732 aa8.89□□□□□ -0.99
SIK3-207ENST00000465421 POLR1AO95602 1720 aaPredicted RBP8.88□□□□□ -0.99
SIK3-207ENST00000465421 CARMIL2Q6F5E8 1435 aa8.88□□□□□ -0.99
SIK3-207ENST00000465421 KLHL34Q8N239 644 aa8.88□□□□□ -0.99
SIK3-207ENST00000465421 B4GALNT3Q6L9W6 998 aa8.88□□□□□ -0.99
SIK3-207ENST00000465421 P3H3Q8IVL6 736 aa8.87□□□□□ -0.99
SIK3-207ENST00000465421 WASHC2AQ641Q2 1341 aa8.87□□□□□ -0.99
SIK3-207ENST00000465421 KIF14Q15058 1648 aa8.86□□□□□ -0.99
SIK3-207ENST00000465421 TROQ12816 1431 aaPredicted RBP8.86□□□□□ -0.99
SIK3-207ENST00000465421 SHANK2Q9UPX8 1470 aa8.86□□□□□ -0.99
SIK3-207ENST00000465421 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
SIK3-207ENST00000465421 IPO9Q96P70 1041 aaKnown RBP8.86□□□□□ -0.99
SIK3-207ENST00000465421 ABCC10Q5T3U5 1492 aa8.86□□□□□ -0.99
SIK3-207ENST00000465421 DAPK1P53355 1430 aa8.85□□□□□ -0.99
SIK3-207ENST00000465421 ARHGEF5Q12774 1597 aa8.85□□□□□ -0.99
SIK3-207ENST00000465421 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
SIK3-207ENST00000465421 ZBED9Q6R2W3 1325 aa8.84□□□□□ -0.99
SIK3-207ENST00000465421 TONSLQ96HA7 1378 aa8.84□□□□□ -1
SIK3-207ENST00000465421 CCDC184Q52MB2 194 aa8.84□□□□□ -1
SIK3-207ENST00000465421 PREX2Q70Z35 1606 aa8.83□□□□□ -1
SIK3-207ENST00000465421 ABCC5O15440 1437 aa8.83□□□□□ -1
SIK3-207ENST00000465421 MAST1Q9Y2H9 1570 aa8.82□□□□□ -1
SIK3-207ENST00000465421 CNTLNQ9NXG0 1405 aa8.82□□□□□ -1
SIK3-207ENST00000465421 CAMSAP2Q08AD1 1489 aa8.82□□□□□ -1
SIK3-207ENST00000465421 RNF123Q5XPI4 1314 aa8.82□□□□□ -1
SIK3-207ENST00000465421 GPATCH8Q9UKJ3 1502 aaKnown RBP8.82□□□□□ -1
SIK3-207ENST00000465421 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
SIK3-207ENST00000465421 CCDC136Q96JN2 1154 aa8.81□□□□□ -1
SIK3-207ENST00000465421 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
SIK3-207ENST00000465421 WASHC2CQ9Y4E1 1318 aa8.8□□□□□ -1
SIK3-207ENST00000465421 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
SIK3-207ENST00000465421 SMG6Q86US8 1419 aaKnown RBP8.8□□□□□ -1
SIK3-207ENST00000465421 CDC42BPBQ9Y5S2 1711 aa8.8□□□□□ -1
SIK3-207ENST00000465421 ANP32AP39687 249 aaKnown RBP8.79□□□□□ -1
SIK3-207ENST00000465421 JPH4Q96JJ6 628 aa8.79□□□□□ -1
SIK3-207ENST00000465421 PLB1Q6P1J6 1458 aa8.79□□□□□ -1
SIK3-207ENST00000465421 FBLN2P98095 1184 aa8.79□□□□□ -1
SIK3-207ENST00000465421 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
SIK3-207ENST00000465421 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
SIK3-207ENST00000465421 MBD5Q9P267 1494 aa8.79□□□□□ -1
SIK3-207ENST00000465421 FAM9BQ8IZU0 186 aa8.78□□□□□ -1
SIK3-207ENST00000465421 PRG4Q92954 1404 aaPredicted RBP8.78□□□□□ -1
SIK3-207ENST00000465421 KCNA4P22459 653 aa8.78□□□□□ -1
SIK3-207ENST00000465421 PRKRIP1Q9H875 184 aaPredicted RBP8.78□□□□□ -1
SIK3-207ENST00000465421 PZPP20742 1482 aa8.78□□□□□ -1
SIK3-207ENST00000465421 POLR3GLQ9BT43 218 aa8.77□□□□□ -1.01
SIK3-207ENST00000465421 UHRF1BP1LA0JNW5 1464 aa8.77□□□□□ -1.01
SIK3-207ENST00000465421 ATP10BO94823 1461 aa8.77□□□□□ -1.01
SIK3-207ENST00000465421 NCOA1Q15788 1441 aa8.77□□□□□ -1.01
SIK3-207ENST00000465421 RPRD2Q5VT52 1461 aaKnown RBP8.77□□□□□ -1.01
SIK3-207ENST00000465421 HSPA5P11021 654 aaKnown RBP8.77□□□□□ -1.01
SIK3-207ENST00000465421 USP35Q9P2H5 1018 aa8.77□□□□□ -1.01
SIK3-207ENST00000465421 UNC13BO14795 1591 aa8.76□□□□□ -1.01
SIK3-207ENST00000465421 PLXNC1O60486 1568 aa8.76□□□□□ -1.01
SIK3-207ENST00000465421 OSCARQ8IYS5 282 aa8.76□□□□□ -1.01
SIK3-207ENST00000465421 SAMD9LQ8IVG5 1584 aa8.75□□□□□ -1.01
SIK3-207ENST00000465421 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
SIK3-207ENST00000465421 PTPRGP23470 1445 aa8.75□□□□□ -1.01
SIK3-207ENST00000465421 MYO5CQ9NQX4 1742 aa8.74□□□□□ -1.01
SIK3-207ENST00000465421 ANKRD30BQ9BXX2 1392 aa8.74□□□□□ -1.01
SIK3-207ENST00000465421 CCDC7Q96M83 1385 aa8.74□□□□□ -1.01
SIK3-207ENST00000465421 ABCC2Q92887 1545 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms