RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 NUP160Q12769 1436 aa26.65■■□□□ 1.86
TSPAN4-210ENST00000464987 ABCC5O15440 1437 aa26.64■■□□□ 1.85
TSPAN4-210ENST00000464987 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
TSPAN4-210ENST00000464987 CDK11AQ9UQ88 783 aaPredicted RBP26.62■■□□□ 1.85
TSPAN4-210ENST00000464987 KIF14Q15058 1648 aa26.6■■□□□ 1.85
TSPAN4-210ENST00000464987 FOXD1Q16676 465 aa26.6■■□□□ 1.85
TSPAN4-210ENST00000464987 MPHOSPH9Q99550 1183 aa26.6■■□□□ 1.85
TSPAN4-210ENST00000464987 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
TSPAN4-210ENST00000464987 CARMIL2Q6F5E8 1435 aa26.56■■□□□ 1.84
TSPAN4-210ENST00000464987 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
TSPAN4-210ENST00000464987 CAMSAP2Q08AD1 1489 aa26.53■■□□□ 1.84
TSPAN4-210ENST00000464987 ADCY10Q96PN6 1610 aa26.53■■□□□ 1.84
TSPAN4-210ENST00000464987 ITSN2Q9NZM3 1697 aa26.52■■□□□ 1.84
TSPAN4-210ENST00000464987 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
TSPAN4-210ENST00000464987 CFDP1Q9UEE9 299 aaPredicted RBP26.5■■□□□ 1.83
TSPAN4-210ENST00000464987 ZNF777Q9ULD5 760 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-210ENST00000464987 ABCA8O94911 1581 aa26.47■■□□□ 1.83
TSPAN4-210ENST00000464987 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
TSPAN4-210ENST00000464987 CDC42BPAQ5VT25 1732 aa26.43■■□□□ 1.82
TSPAN4-210ENST00000464987 ADGBQ8N7X0 1667 aa26.43■■□□□ 1.82
TSPAN4-210ENST00000464987 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
TSPAN4-210ENST00000464987 CROCC2H7BZ55 1655 aa26.42■■□□□ 1.82
TSPAN4-210ENST00000464987 ATP10BO94823 1461 aa26.42■■□□□ 1.82
TSPAN4-210ENST00000464987 NCOA1Q15788 1441 aa26.39■■□□□ 1.82
TSPAN4-210ENST00000464987 SLC4A1APQ9BWU0 796 aaKnown RBP26.39■■□□□ 1.81
TSPAN4-210ENST00000464987 ANP32CO43423 234 aa26.38■■□□□ 1.81
TSPAN4-210ENST00000464987 HSPA5P11021 654 aaKnown RBP26.38■■□□□ 1.81
TSPAN4-210ENST00000464987 RPRD2Q5VT52 1461 aaKnown RBP26.37■■□□□ 1.81
TSPAN4-210ENST00000464987 PLEKHD1A6NEE1 506 aa26.37■■□□□ 1.81
TSPAN4-210ENST00000464987 PZPP20742 1482 aa26.35■■□□□ 1.81
TSPAN4-210ENST00000464987 CHD1O14646 1710 aa26.35■■□□□ 1.81
TSPAN4-210ENST00000464987 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
TSPAN4-210ENST00000464987 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
TSPAN4-210ENST00000464987 TEX14Q8IWB6 1497 aa26.32■■□□□ 1.8
TSPAN4-210ENST00000464987 WASHC2AQ641Q2 1341 aa26.32■■□□□ 1.8
TSPAN4-210ENST00000464987 CCER2I3L3R5 266 aa26.31■■□□□ 1.8
TSPAN4-210ENST00000464987 SUPT16HQ9Y5B9 1047 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-210ENST00000464987 NBPF8Q3BBV2 869 aa26.31■■□□□ 1.8
TSPAN4-210ENST00000464987 EIF4G2P78344 907 aaKnown RBP eCLIP26.28■■□□□ 1.8
TSPAN4-210ENST00000464987 PTPRGP23470 1445 aa26.27■■□□□ 1.8
TSPAN4-210ENST00000464987 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
TSPAN4-210ENST00000464987 C11orf95C9JLR9 678 aaPredicted RBP26.22■■□□□ 1.79
TSPAN4-210ENST00000464987 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
TSPAN4-210ENST00000464987 C9orf84Q5VXU9 1444 aa26.2■■□□□ 1.79
TSPAN4-210ENST00000464987 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
TSPAN4-210ENST00000464987 KIAA1107Q9UPP5 1409 aa26.18■■□□□ 1.78
TSPAN4-210ENST00000464987 HNRNPMP52272 730 aaKnown RBP eCLIP26.18■■□□□ 1.78
TSPAN4-210ENST00000464987 PKD2Q13563 968 aa26.18■■□□□ 1.78
TSPAN4-210ENST00000464987 SHANK2Q9UPX8 1470 aa26.16■■□□□ 1.78
TSPAN4-210ENST00000464987 ERCC6L2Q5T890 1561 aa26.15■■□□□ 1.78
TSPAN4-210ENST00000464987 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
TSPAN4-210ENST00000464987 SAMD9LQ8IVG5 1584 aa26.14■■□□□ 1.77
TSPAN4-210ENST00000464987 MBD5Q9P267 1494 aa26.12■■□□□ 1.77
TSPAN4-210ENST00000464987 PREX2Q70Z35 1606 aa26.11■■□□□ 1.77
TSPAN4-210ENST00000464987 TSPY4P0CV99 314 aa26.11■■□□□ 1.77
TSPAN4-210ENST00000464987 TSPY10P0CW01 314 aa26.11■■□□□ 1.77
TSPAN4-210ENST00000464987 SPATA31E1Q6ZUB1 1445 aa26.11■■□□□ 1.77
TSPAN4-210ENST00000464987 NUP155O75694 1391 aa26.11■■□□□ 1.77
TSPAN4-210ENST00000464987 CCDC7Q96M83 1385 aa26.11■■□□□ 1.77
TSPAN4-210ENST00000464987 CNTLNQ9NXG0 1405 aa26.1■■□□□ 1.77
TSPAN4-210ENST00000464987 ARHGEF5Q12774 1597 aa26.09■■□□□ 1.77
TSPAN4-210ENST00000464987 POLR1AO95602 1720 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-210ENST00000464987 KIF15Q9NS87 1388 aa26.07■■□□□ 1.76
TSPAN4-210ENST00000464987 TTC37Q6PGP7 1564 aa26.07■■□□□ 1.76
TSPAN4-210ENST00000464987 ZNF326Q5BKZ1 582 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-210ENST00000464987 CCDC141Q6ZP82 1450 aa26.02■■□□□ 1.76
TSPAN4-210ENST00000464987 KIF7Q2M1P5 1343 aa26.02■■□□□ 1.76
TSPAN4-210ENST00000464987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
TSPAN4-210ENST00000464987 KDM5DQ9BY66 1539 aa26.02■■□□□ 1.76
TSPAN4-210ENST00000464987 CCDC184Q52MB2 194 aa26.02■■□□□ 1.76
TSPAN4-210ENST00000464987 SYCP2Q9BX26 1530 aa26.01■■□□□ 1.75
TSPAN4-210ENST00000464987 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
TSPAN4-210ENST00000464987 FKBP8Q14318 412 aa25.98■■□□□ 1.75
TSPAN4-210ENST00000464987 BCANQ96GW7 911 aa25.98■■□□□ 1.75
TSPAN4-210ENST00000464987 ABCC2Q92887 1545 aa25.98■■□□□ 1.75
TSPAN4-210ENST00000464987 BCORL1Q5H9F3 1711 aa25.98■■□□□ 1.75
TSPAN4-210ENST00000464987 ARHGAP5Q13017 1502 aa25.98■■□□□ 1.75
TSPAN4-210ENST00000464987 PRKRIP1Q9H875 184 aaPredicted RBP25.95■■□□□ 1.74
TSPAN4-210ENST00000464987 MYO5CQ9NQX4 1742 aa25.94■■□□□ 1.74
TSPAN4-210ENST00000464987 HNRNPUQ00839 825 aaKnown RBP eCLIP25.94■■□□□ 1.74
TSPAN4-210ENST00000464987 USP47Q96K76 1375 aa25.94■■□□□ 1.74
TSPAN4-210ENST00000464987 KDM5CP41229 1560 aa25.93■■□□□ 1.74
TSPAN4-210ENST00000464987 FAM135AQ9P2D6 1515 aa25.91■■□□□ 1.74
TSPAN4-210ENST00000464987 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
TSPAN4-210ENST00000464987 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
TSPAN4-210ENST00000464987 ZCCHC11Q5TAX3 1644 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-210ENST00000464987 KDM2AQ9Y2K7 1162 aa25.88■■□□□ 1.73
TSPAN4-210ENST00000464987 CLASP1Q7Z460 1538 aa25.87■■□□□ 1.73
TSPAN4-210ENST00000464987 MAST1Q9Y2H9 1570 aa25.87■■□□□ 1.73
TSPAN4-210ENST00000464987 ARHGEF12Q9NZN5 1544 aa25.85■■□□□ 1.73
TSPAN4-210ENST00000464987 RALGAPBQ86X10 1494 aa25.85■■□□□ 1.73
TSPAN4-210ENST00000464987 POLR3GLQ9BT43 218 aa25.84■■□□□ 1.73
TSPAN4-210ENST00000464987 DCAF11Q8TEB1 546 aa25.83■■□□□ 1.72
TSPAN4-210ENST00000464987 UNC13BO14795 1591 aa25.82■■□□□ 1.72
TSPAN4-210ENST00000464987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.81■■□□□ 1.72
TSPAN4-210ENST00000464987 FAM9BQ8IZU0 186 aa25.8■■□□□ 1.72
TSPAN4-210ENST00000464987 MRS2Q9HD23 443 aa25.8■■□□□ 1.72
TSPAN4-210ENST00000464987 CARD11Q9BXL7 1154 aa25.8■■□□□ 1.72
TSPAN4-210ENST00000464987 CNGB1Q14028 1251 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-210ENST00000464987 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms