RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 ZCCHC11Q5TAX3 1644 aaKnown RBP28.52■■■□□ 2.16
POLR2J3-203ENST00000464525 ABCC10Q5T3U5 1492 aa28.52■■■□□ 2.16
POLR2J3-203ENST00000464525 KCNH8Q96L42 1107 aa28.51■■■□□ 2.15
POLR2J3-203ENST00000464525 KDM5BQ9UGL1 1544 aa28.49■■■□□ 2.15
POLR2J3-203ENST00000464525 ITSN2Q9NZM3 1697 aa28.49■■■□□ 2.15
POLR2J3-203ENST00000464525 CDC42BPAQ5VT25 1732 aa28.47■■■□□ 2.15
POLR2J3-203ENST00000464525 CAMSAP2Q08AD1 1489 aa28.44■■■□□ 2.14
POLR2J3-203ENST00000464525 SCAF1Q9H7N4 1312 aaKnown RBP28.42■■■□□ 2.14
POLR2J3-203ENST00000464525 YTHDC1Q96MU7 727 aaKnown RBP28.41■■■□□ 2.14
POLR2J3-203ENST00000464525 KDM6BO15054 1643 aa28.41■■■□□ 2.14
POLR2J3-203ENST00000464525 DAPK1P53355 1430 aa28.39■■■□□ 2.14
POLR2J3-203ENST00000464525 TTC37Q6PGP7 1564 aa28.39■■■□□ 2.13
POLR2J3-203ENST00000464525 ACIN1Q9UKV3 1341 aaKnown RBP28.38■■■□□ 2.13
POLR2J3-203ENST00000464525 ABCC5O15440 1437 aa28.38■■■□□ 2.13
POLR2J3-203ENST00000464525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.38■■■□□ 2.13
POLR2J3-203ENST00000464525 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
POLR2J3-203ENST00000464525 DNMT1P26358 1616 aaKnown RBP28.36■■■□□ 2.13
POLR2J3-203ENST00000464525 PPP1R15AO75807 674 aaPredicted RBP28.35■■■□□ 2.13
POLR2J3-203ENST00000464525 GCC2Q8IWJ2 1684 aa28.35■■■□□ 2.13
POLR2J3-203ENST00000464525 TIMELESSQ9UNS1 1208 aa28.34■■■□□ 2.13
POLR2J3-203ENST00000464525 CDC42BPBQ9Y5S2 1711 aa28.32■■■□□ 2.12
POLR2J3-203ENST00000464525 CENPBP07199 599 aaPredicted RBP28.3■■■□□ 2.12
POLR2J3-203ENST00000464525 PREX2Q70Z35 1606 aa28.3■■■□□ 2.12
POLR2J3-203ENST00000464525 AKNAQ7Z591 1439 aa28.3■■■□□ 2.12
POLR2J3-203ENST00000464525 TONSLQ96HA7 1378 aa28.29■■■□□ 2.12
POLR2J3-203ENST00000464525 HNRNPMP52272 730 aaKnown RBP eCLIP28.28■■■□□ 2.12
POLR2J3-203ENST00000464525 DENND4BO75064 1496 aaPredicted RBP28.28■■■□□ 2.12
POLR2J3-203ENST00000464525 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
POLR2J3-203ENST00000464525 WDR7Q9Y4E6 1490 aa28.26■■■□□ 2.12
POLR2J3-203ENST00000464525 ARHGAP5Q13017 1502 aa28.26■■■□□ 2.11
POLR2J3-203ENST00000464525 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.11
POLR2J3-203ENST00000464525 SAMD9LQ8IVG5 1584 aa28.24■■■□□ 2.11
POLR2J3-203ENST00000464525 ASXL2Q76L83 1435 aa28.24■■■□□ 2.11
POLR2J3-203ENST00000464525 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
POLR2J3-203ENST00000464525 MYO5CQ9NQX4 1742 aa28.24■■■□□ 2.11
POLR2J3-203ENST00000464525 FOXD1Q16676 465 aa28.24■■■□□ 2.11
POLR2J3-203ENST00000464525 MPHOSPH9Q99550 1183 aa28.23■■■□□ 2.11
POLR2J3-203ENST00000464525 ROCK1Q13464 1354 aa28.21■■■□□ 2.11
POLR2J3-203ENST00000464525 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
POLR2J3-203ENST00000464525 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
POLR2J3-203ENST00000464525 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
POLR2J3-203ENST00000464525 CROCC2H7BZ55 1655 aa28.18■■■□□ 2.1
POLR2J3-203ENST00000464525 PLCH2O75038 1416 aa28.17■■■□□ 2.1
POLR2J3-203ENST00000464525 MBD5Q9P267 1494 aa28.17■■■□□ 2.1
POLR2J3-203ENST00000464525 SYCP2Q9BX26 1530 aa28.15■■■□□ 2.1
POLR2J3-203ENST00000464525 NCOA1Q15788 1441 aa28.14■■■□□ 2.1
POLR2J3-203ENST00000464525 TSPY4P0CV99 314 aa28.13■■■□□ 2.09
POLR2J3-203ENST00000464525 TSPY10P0CW01 314 aa28.13■■■□□ 2.09
POLR2J3-203ENST00000464525 C9orf84Q5VXU9 1444 aa28.13■■■□□ 2.09
POLR2J3-203ENST00000464525 ADGBQ8N7X0 1667 aa28.12■■■□□ 2.09
POLR2J3-203ENST00000464525 EFCAB2Q5VUJ9 269 aa28.11■■■□□ 2.09
POLR2J3-203ENST00000464525 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
POLR2J3-203ENST00000464525 ARHGEF5Q12774 1597 aa28.1■■■□□ 2.09
POLR2J3-203ENST00000464525 ANKRD30AQ9BXX3 1397 aa28.09■■■□□ 2.09
POLR2J3-203ENST00000464525 ADGRL2O95490 1459 aa28.09■■■□□ 2.09
POLR2J3-203ENST00000464525 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
POLR2J3-203ENST00000464525 ARHGEF12Q9NZN5 1544 aa28.06■■■□□ 2.08
POLR2J3-203ENST00000464525 SHANK2Q9UPX8 1470 aa28.06■■■□□ 2.08
POLR2J3-203ENST00000464525 GTF3C3Q9Y5Q9 886 aa28.06■■■□□ 2.08
POLR2J3-203ENST00000464525 ABCA9Q8IUA7 1624 aa28.06■■■□□ 2.08
POLR2J3-203ENST00000464525 SLC4A1APQ9BWU0 796 aaKnown RBP28.06■■■□□ 2.08
POLR2J3-203ENST00000464525 RSPH4AQ5TD94 716 aa28.02■■■□□ 2.08
POLR2J3-203ENST00000464525 KIAA1107Q9UPP5 1409 aa28.02■■■□□ 2.08
POLR2J3-203ENST00000464525 PLEKHH2Q8IVE3 1493 aa28.01■■■□□ 2.08
POLR2J3-203ENST00000464525 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
POLR2J3-203ENST00000464525 FANCAO15360 1455 aa27.99■■■□□ 2.07
POLR2J3-203ENST00000464525 L3MBTL2Q969R5 705 aa27.98■■■□□ 2.07
POLR2J3-203ENST00000464525 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
POLR2J3-203ENST00000464525 ABCC1P33527 1531 aa27.98■■■□□ 2.07
POLR2J3-203ENST00000464525 ANKRD50Q9ULJ7 1429 aa27.98■■■□□ 2.07
POLR2J3-203ENST00000464525 TRAPPC8Q9Y2L5 1435 aa27.97■■■□□ 2.07
POLR2J3-203ENST00000464525 ARAP3Q8WWN8 1544 aa27.96■■■□□ 2.07
POLR2J3-203ENST00000464525 PZPP20742 1482 aa27.95■■■□□ 2.06
POLR2J3-203ENST00000464525 AFAP1Q8N556 730 aa27.94■■■□□ 2.06
POLR2J3-203ENST00000464525 CD109Q6YHK3 1445 aa27.91■■■□□ 2.06
POLR2J3-203ENST00000464525 MAST1Q9Y2H9 1570 aa27.88■■■□□ 2.05
POLR2J3-203ENST00000464525 RPRD2Q5VT52 1461 aaKnown RBP27.88■■■□□ 2.05
POLR2J3-203ENST00000464525 ADGRL1O94910 1474 aa27.87■■■□□ 2.05
POLR2J3-203ENST00000464525 SCAPERQ9BY12 1400 aa27.86■■■□□ 2.05
POLR2J3-203ENST00000464525 PKD2Q13563 968 aa27.85■■■□□ 2.05
POLR2J3-203ENST00000464525 SPAG9O60271 1321 aaKnown RBP27.84■■■□□ 2.05
POLR2J3-203ENST00000464525 HSPA5P11021 654 aaKnown RBP27.83■■■□□ 2.05
POLR2J3-203ENST00000464525 NBPF8Q3BBV2 869 aa27.82■■■□□ 2.04
POLR2J3-203ENST00000464525 NUP155O75694 1391 aa27.81■■■□□ 2.04
POLR2J3-203ENST00000464525 MYT1LQ9UL68 1186 aa27.8■■■□□ 2.04
POLR2J3-203ENST00000464525 TEX14Q8IWB6 1497 aa27.79■■■□□ 2.04
POLR2J3-203ENST00000464525 PLXNC1O60486 1568 aa27.79■■■□□ 2.04
POLR2J3-203ENST00000464525 FAM69CQ0P6D2 419 aa27.75■■■□□ 2.03
POLR2J3-203ENST00000464525 ZFYVE16Q7Z3T8 1539 aa27.74■■■□□ 2.03
POLR2J3-203ENST00000464525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.74■■■□□ 2.03
POLR2J3-203ENST00000464525 EIF4G2P78344 907 aaKnown RBP eCLIP27.74■■■□□ 2.03
POLR2J3-203ENST00000464525 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
POLR2J3-203ENST00000464525 DUOX2Q9NRD8 1548 aa27.72■■■□□ 2.03
POLR2J3-203ENST00000464525 WASHC2AQ641Q2 1341 aa27.71■■■□□ 2.03
POLR2J3-203ENST00000464525 RTEL1-TNFRSF6BF6WH68 1400 aa27.7■■■□□ 2.03
POLR2J3-203ENST00000464525 ATP7AQ04656 1500 aa27.69■■■□□ 2.02
POLR2J3-203ENST00000464525 ANP32CO43423 234 aa27.68■■■□□ 2.02
POLR2J3-203ENST00000464525 MAP3K4Q9Y6R4 1608 aa27.68■■■□□ 2.02
POLR2J3-203ENST00000464525 CFAP74Q9C0B2 1584 aa27.68■■■□□ 2.02
POLR2J3-203ENST00000464525 INO80Q9ULG1 1556 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms