RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
GYPC-205ENST00000464053 MYO5CQ9NQX4 1742 aa23.23■■□□□ 1.31
GYPC-205ENST00000464053 ABCA9Q8IUA7 1624 aa23.18■■□□□ 1.3
GYPC-205ENST00000464053 ARHGAP5Q13017 1502 aa23.17■■□□□ 1.3
GYPC-205ENST00000464053 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
GYPC-205ENST00000464053 PLCH2O75038 1416 aa23.17■■□□□ 1.3
GYPC-205ENST00000464053 MAPKBP1O60336 1514 aa23.17■■□□□ 1.3
GYPC-205ENST00000464053 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
GYPC-205ENST00000464053 ABCC5O15440 1437 aa23.15■■□□□ 1.3
GYPC-205ENST00000464053 DAPK1P53355 1430 aa23.15■■□□□ 1.3
GYPC-205ENST00000464053 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
GYPC-205ENST00000464053 SETD5Q9C0A6 1442 aa23.1■■□□□ 1.29
GYPC-205ENST00000464053 HNRNPMP52272 730 aaKnown RBP eCLIP23.09■■□□□ 1.291e-8■■■■■ 30.5
GYPC-205ENST00000464053 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.29
GYPC-205ENST00000464053 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
GYPC-205ENST00000464053 CROCC2H7BZ55 1655 aa23.08■■□□□ 1.29
GYPC-205ENST00000464053 MBD5Q9P267 1494 aa23.08■■□□□ 1.28
GYPC-205ENST00000464053 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
GYPC-205ENST00000464053 SYCP2Q9BX26 1530 aa23.06■■□□□ 1.28
GYPC-205ENST00000464053 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
GYPC-205ENST00000464053 ARHGEF5Q12774 1597 aa23.05■■□□□ 1.28
GYPC-205ENST00000464053 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
GYPC-205ENST00000464053 NAIPQ13075 1403 aa23.04■■□□□ 1.28
GYPC-205ENST00000464053 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
GYPC-205ENST00000464053 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
GYPC-205ENST00000464053 ARHGEF12Q9NZN5 1544 aa23.04■■□□□ 1.28
GYPC-205ENST00000464053 CD109Q6YHK3 1445 aa23.02■■□□□ 1.28
GYPC-205ENST00000464053 KIAA1107Q9UPP5 1409 aa23.02■■□□□ 1.28
GYPC-205ENST00000464053 FANCAO15360 1455 aa23.01■■□□□ 1.27
GYPC-205ENST00000464053 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
GYPC-205ENST00000464053 ABCC1P33527 1531 aa23.01■■□□□ 1.27
GYPC-205ENST00000464053 HRCP23327 699 aa23.01■■□□□ 1.27
GYPC-205ENST00000464053 ROCK1Q13464 1354 aa23■■□□□ 1.27
GYPC-205ENST00000464053 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
GYPC-205ENST00000464053 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
GYPC-205ENST00000464053 CCDC141Q6ZP82 1450 aa23■■□□□ 1.27
GYPC-205ENST00000464053 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
GYPC-205ENST00000464053 GLI2P10070 1586 aa22.98■■□□□ 1.27
GYPC-205ENST00000464053 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
GYPC-205ENST00000464053 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
GYPC-205ENST00000464053 MAP3K4Q9Y6R4 1608 aa22.97■■□□□ 1.27
GYPC-205ENST00000464053 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
GYPC-205ENST00000464053 NCOA1Q15788 1441 aa22.96■■□□□ 1.27
GYPC-205ENST00000464053 RSPH4AQ5TD94 716 aa22.96■■□□□ 1.27
GYPC-205ENST00000464053 KDM6BO15054 1643 aa22.96■■□□□ 1.27
GYPC-205ENST00000464053 TSPY4P0CV99 314 aa22.95■■□□□ 1.26
GYPC-205ENST00000464053 TSPY10P0CW01 314 aa22.95■■□□□ 1.26
GYPC-205ENST00000464053 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
GYPC-205ENST00000464053 FAM69CQ0P6D2 419 aa22.94■■□□□ 1.26
GYPC-205ENST00000464053 DNAJC5Q9H3Z4 198 aa22.94■■□□□ 1.26
GYPC-205ENST00000464053 TRAPPC8Q9Y2L5 1435 aa22.93■■□□□ 1.26
GYPC-205ENST00000464053 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
GYPC-205ENST00000464053 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
GYPC-205ENST00000464053 MAST1Q9Y2H9 1570 aa22.9■■□□□ 1.26
GYPC-205ENST00000464053 SCAPERQ9BY12 1400 aa22.89■■□□□ 1.25
GYPC-205ENST00000464053 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.25
GYPC-205ENST00000464053 AFAP1Q8N556 730 aa22.88■■□□□ 1.25
GYPC-205ENST00000464053 KIF13AQ9H1H9 1805 aa22.87■■□□□ 1.25
GYPC-205ENST00000464053 TSPOAP1O95153 1857 aa22.84■■□□□ 1.25
GYPC-205ENST00000464053 NEO1Q92859 1461 aa22.84■■□□□ 1.25
GYPC-205ENST00000464053 PPRC1Q5VV67 1664 aaKnown RBP22.83■■□□□ 1.25
GYPC-205ENST00000464053 KIF15Q9NS87 1388 aa22.83■■□□□ 1.25
GYPC-205ENST00000464053 PLXNC1O60486 1568 aa22.81■■□□□ 1.24
GYPC-205ENST00000464053 SPAG9O60271 1321 aaKnown RBP22.8■■□□□ 1.24
GYPC-205ENST00000464053 ANKRD50Q9ULJ7 1429 aa22.8■■□□□ 1.24
GYPC-205ENST00000464053 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
GYPC-205ENST00000464053 ZFYVE16Q7Z3T8 1539 aa22.79■■□□□ 1.24
GYPC-205ENST00000464053 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
GYPC-205ENST00000464053 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
GYPC-205ENST00000464053 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.23
GYPC-205ENST00000464053 POGZQ7Z3K3 1410 aa22.77■■□□□ 1.23
GYPC-205ENST00000464053 ZNF518AQ6AHZ1 1483 aa22.76■■□□□ 1.23
GYPC-205ENST00000464053 ATP7AQ04656 1500 aa22.75■■□□□ 1.23
GYPC-205ENST00000464053 KDM5CP41229 1560 aa22.73■■□□□ 1.23
GYPC-205ENST00000464053 CLSPNQ9HAW4 1339 aa22.73■■□□□ 1.23
GYPC-205ENST00000464053 DENND4BO75064 1496 aaPredicted RBP22.72■■□□□ 1.23
GYPC-205ENST00000464053 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
GYPC-205ENST00000464053 KIDINS220Q9ULH0 1771 aa22.72■■□□□ 1.23
GYPC-205ENST00000464053 DUOX2Q9NRD8 1548 aa22.72■■□□□ 1.23
GYPC-205ENST00000464053 TEX14Q8IWB6 1497 aa22.71■■□□□ 1.23
GYPC-205ENST00000464053 RICTORQ6R327 1708 aa22.7■■□□□ 1.22
GYPC-205ENST00000464053 MYT1LQ9UL68 1186 aa22.69■■□□□ 1.22
GYPC-205ENST00000464053 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
GYPC-205ENST00000464053 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
GYPC-205ENST00000464053 HECW2Q9P2P5 1572 aa22.66■■□□□ 1.22
GYPC-205ENST00000464053 MLH3Q9UHC1 1453 aa22.66■■□□□ 1.22
GYPC-205ENST00000464053 FRMPD1Q5SYB0 1578 aa22.66■■□□□ 1.22
GYPC-205ENST00000464053 ERBINQ96RT1 1412 aa22.65■■□□□ 1.22
GYPC-205ENST00000464053 PZPP20742 1482 aa22.65■■□□□ 1.22
GYPC-205ENST00000464053 NUP155O75694 1391 aa22.62■■□□□ 1.21
GYPC-205ENST00000464053 SLC4A1APQ9BWU0 796 aaKnown RBP22.61■■□□□ 1.21
GYPC-205ENST00000464053 UNC13BO14795 1591 aa22.61■■□□□ 1.21
GYPC-205ENST00000464053 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
GYPC-205ENST00000464053 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
GYPC-205ENST00000464053 ABCA6Q8N139 1617 aa22.6■■□□□ 1.21
GYPC-205ENST00000464053 FOXD1Q16676 465 aa22.59■■□□□ 1.21
GYPC-205ENST00000464053 DHX29Q7Z478 1369 aaKnown RBP22.59■■□□□ 1.21
GYPC-205ENST00000464053 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
GYPC-205ENST00000464053 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
GYPC-205ENST00000464053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 870 ms