RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 ARHGEF40Q8TER5 1519 aa32.84■■■□□ 2.85
PRDM16-204ENST00000463591 POGZQ7Z3K3 1410 aa32.84■■■□□ 2.85
PRDM16-204ENST00000463591 ARHGAP5Q13017 1502 aa32.82■■■□□ 2.84
PRDM16-204ENST00000463591 ZFYVE16Q7Z3T8 1539 aa32.78■■■□□ 2.84
PRDM16-204ENST00000463591 ADAMTSL3P82987 1691 aa32.77■■■□□ 2.84
PRDM16-204ENST00000463591 CEP162Q5TB80 1403 aa32.75■■■□□ 2.83
PRDM16-204ENST00000463591 YEATS2Q9ULM3 1422 aa32.75■■■□□ 2.83
PRDM16-204ENST00000463591 BCORL1Q5H9F3 1711 aa32.74■■■□□ 2.83
PRDM16-204ENST00000463591 ZNF518AQ6AHZ1 1483 aa32.73■■■□□ 2.83
PRDM16-204ENST00000463591 CDC42BPBQ9Y5S2 1711 aa32.71■■■□□ 2.83
PRDM16-204ENST00000463591 PREX2Q70Z35 1606 aa32.69■■■□□ 2.82
PRDM16-204ENST00000463591 PTPRMP28827 1452 aa32.68■■■□□ 2.82
PRDM16-204ENST00000463591 AFAP1Q8N556 730 aa32.68■■■□□ 2.82
PRDM16-204ENST00000463591 ATP10AO60312 1499 aa32.67■■■□□ 2.82
PRDM16-204ENST00000463591 MTUS2Q5JR59 1369 aa32.63■■■□□ 2.81
PRDM16-204ENST00000463591 KDM5CP41229 1560 aa32.62■■■□□ 2.81
PRDM16-204ENST00000463591 HECW2Q9P2P5 1572 aa32.62■■■□□ 2.81
PRDM16-204ENST00000463591 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
PRDM16-204ENST00000463591 MYT1LQ9UL68 1186 aa32.61■■■□□ 2.81
PRDM16-204ENST00000463591 C9orf84Q5VXU9 1444 aa32.6■■■□□ 2.81
PRDM16-204ENST00000463591 CDC42BPAQ5VT25 1732 aa32.6■■■□□ 2.81
PRDM16-204ENST00000463591 MADDQ8WXG6 1647 aa32.6■■■□□ 2.81
PRDM16-204ENST00000463591 ABCC1P33527 1531 aa32.59■■■□□ 2.81
PRDM16-204ENST00000463591 GPATCH8Q9UKJ3 1502 aaKnown RBP32.59■■■□□ 2.81
PRDM16-204ENST00000463591 MLH3Q9UHC1 1453 aa32.57■■■□□ 2.8
PRDM16-204ENST00000463591 TRAPPC8Q9Y2L5 1435 aa32.56■■■□□ 2.8
PRDM16-204ENST00000463591 CCNB3Q8WWL7 1395 aa32.56■■■□□ 2.8
PRDM16-204ENST00000463591 ARHGEF12Q9NZN5 1544 aa32.56■■■□□ 2.8
PRDM16-204ENST00000463591 ZNF777Q9ULD5 760 aaPredicted RBP32.55■■■□□ 2.8
PRDM16-204ENST00000463591 CFDP1Q9UEE9 299 aaPredicted RBP32.53■■■□□ 2.8
PRDM16-204ENST00000463591 SIGLEC1Q9BZZ2 1709 aa32.53■■■□□ 2.8
PRDM16-204ENST00000463591 MLECQ14165 292 aa32.52■■■□□ 2.8
PRDM16-204ENST00000463591 ITSN2Q9NZM3 1697 aa32.51■■■□□ 2.79
PRDM16-204ENST00000463591 EHBP1L1Q8N3D4 1523 aa32.49■■■□□ 2.79
PRDM16-204ENST00000463591 RIMS1Q86UR5 1692 aaKnown RBP32.49■■■□□ 2.79
PRDM16-204ENST00000463591 PLEKHH2Q8IVE3 1493 aa32.47■■■□□ 2.79
PRDM16-204ENST00000463591 SAMD9LQ8IVG5 1584 aa32.46■■■□□ 2.79
PRDM16-204ENST00000463591 KIAA1107Q9UPP5 1409 aa32.46■■■□□ 2.79
PRDM16-204ENST00000463591 REREQ9P2R6 1566 aa32.45■■■□□ 2.79
PRDM16-204ENST00000463591 DIP2CQ9Y2E4 1556 aa32.45■■■□□ 2.79
PRDM16-204ENST00000463591 HNRNPMP52272 730 aaKnown RBP eCLIP32.45■■■□□ 2.79
PRDM16-204ENST00000463591 VPS8Q8N3P4 1428 aa32.42■■■□□ 2.78
PRDM16-204ENST00000463591 SYCP2Q9BX26 1530 aa32.41■■■□□ 2.78
PRDM16-204ENST00000463591 SPAG9O60271 1321 aaKnown RBP32.4■■■□□ 2.78
PRDM16-204ENST00000463591 ABCA6Q8N139 1617 aa32.4■■■□□ 2.78
PRDM16-204ENST00000463591 FER1L4A9Z1Z3 1794 aa32.38■■■□□ 2.77
PRDM16-204ENST00000463591 KIDINS220Q9ULH0 1771 aa32.37■■■□□ 2.77
PRDM16-204ENST00000463591 AGLP35573 1532 aa32.37■■■□□ 2.77
PRDM16-204ENST00000463591 TIAM1Q13009 1591 aa32.36■■■□□ 2.77
PRDM16-204ENST00000463591 PLPPR3Q6T4P5 718 aa32.33■■■□□ 2.77
PRDM16-204ENST00000463591 LMTK3Q96Q04 1460 aa32.3■■■□□ 2.76
PRDM16-204ENST00000463591 SUPT6HQ7KZ85 1726 aaKnown RBP32.3■■■□□ 2.76
PRDM16-204ENST00000463591 NCOA2Q15596 1464 aa32.29■■■□□ 2.76
PRDM16-204ENST00000463591 ZNF644Q9H582 1327 aaPredicted RBP32.29■■■□□ 2.76
PRDM16-204ENST00000463591 ESF1Q9H501 851 aaKnown RBP32.27■■■□□ 2.76
PRDM16-204ENST00000463591 ATP7AQ04656 1500 aa32.26■■■□□ 2.75
PRDM16-204ENST00000463591 MAP3K1Q13233 1512 aa32.26■■■□□ 2.75
PRDM16-204ENST00000463591 LRRC9Q6ZRR7 1453 aa32.24■■■□□ 2.75
PRDM16-204ENST00000463591 MBD5Q9P267 1494 aa32.24■■■□□ 2.75
PRDM16-204ENST00000463591 RSPH4AQ5TD94 716 aa32.24■■■□□ 2.75
PRDM16-204ENST00000463591 CEBPAP49715 358 aaPredicted RBP32.22■■■□□ 2.75
PRDM16-204ENST00000463591 INO80Q9ULG1 1556 aaPredicted RBP32.21■■■□□ 2.75
PRDM16-204ENST00000463591 RTEL1-TNFRSF6BF6WH68 1400 aa32.18■■■□□ 2.74
PRDM16-204ENST00000463591 A2MP01023 1474 aa32.18■■■□□ 2.74
PRDM16-204ENST00000463591 CNTLNQ9NXG0 1405 aa32.17■■■□□ 2.74
PRDM16-204ENST00000463591 KANK4Q5T7N3 995 aaPredicted RBP32.15■■■□□ 2.74
PRDM16-204ENST00000463591 HSPA2P54652 639 aa32.14■■■□□ 2.74
PRDM16-204ENST00000463591 CAMSAP2Q08AD1 1489 aa32.13■■■□□ 2.73
PRDM16-204ENST00000463591 APLP2Q06481 763 aa32.11■■■□□ 2.73
PRDM16-204ENST00000463591 PLXNC1O60486 1568 aa32.11■■■□□ 2.73
PRDM16-204ENST00000463591 CCDC141Q6ZP82 1450 aa32.1■■■□□ 2.73
PRDM16-204ENST00000463591 SETD1BQ9UPS6 1966 aaKnown RBP32.1■■■□□ 2.73
PRDM16-204ENST00000463591 ADGBQ8N7X0 1667 aa32.08■■■□□ 2.73
PRDM16-204ENST00000463591 PREX1Q8TCU6 1659 aa32.08■■■□□ 2.73
PRDM16-204ENST00000463591 PPP6R1Q9UPN7 881 aa32.08■■■□□ 2.73
PRDM16-204ENST00000463591 TSPY4P0CV99 314 aa32.07■■■□□ 2.72
PRDM16-204ENST00000463591 TSPY10P0CW01 314 aa32.07■■■□□ 2.72
PRDM16-204ENST00000463591 C3P01024 1663 aa32.06■■■□□ 2.72
PRDM16-204ENST00000463591 DHX29Q7Z478 1369 aaKnown RBP32.06■■■□□ 2.72
PRDM16-204ENST00000463591 UHRF1BP1Q6BDS2 1440 aa32.04■■■□□ 2.72
PRDM16-204ENST00000463591 GGT6Q6P531 493 aa32.04■■■□□ 2.72
PRDM16-204ENST00000463591 ARHGEF5Q12774 1597 aa32.03■■■□□ 2.72
PRDM16-204ENST00000463591 MIA2Q96PC5 1412 aa32.03■■■□□ 2.72
PRDM16-204ENST00000463591 ZMYM3Q14202 1370 aa32.02■■■□□ 2.72
PRDM16-204ENST00000463591 ILDR1Q86SU0 546 aaPredicted RBP32.01■■■□□ 2.71
PRDM16-204ENST00000463591 MYOM3Q5VTT5 1437 aa32■■■□□ 2.71
PRDM16-204ENST00000463591 MROH2AA6NES4 1674 aa32■■■□□ 2.71
PRDM16-204ENST00000463591 NPATQ14207 1427 aa31.96■■■□□ 2.71
PRDM16-204ENST00000463591 KIF3BO15066 747 aa31.92■■■□□ 2.7
PRDM16-204ENST00000463591 DMRT2Q9Y5R5 561 aa31.91■■■□□ 2.7
PRDM16-204ENST00000463591 CLTCQ00610 1675 aaKnown RBP31.9■■■□□ 2.7
PRDM16-204ENST00000463591 MAST1Q9Y2H9 1570 aa31.87■■■□□ 2.69
PRDM16-204ENST00000463591 PTPRKQ15262 1439 aa31.83■■■□□ 2.69
PRDM16-204ENST00000463591 FAM135AQ9P2D6 1515 aa31.82■■■□□ 2.68
PRDM16-204ENST00000463591 FBXO41Q8TF61 875 aa31.8■■■□□ 2.68
PRDM16-204ENST00000463591 WASHC2CQ9Y4E1 1318 aa31.78■■■□□ 2.68
PRDM16-204ENST00000463591 STRCQ7RTU9 1775 aa31.78■■■□□ 2.68
PRDM16-204ENST00000463591 KDM5DQ9BY66 1539 aa31.75■■■□□ 2.67
PRDM16-204ENST00000463591 PTPN23Q9H3S7 1636 aa31.75■■■□□ 2.67
PRDM16-204ENST00000463591 FGD6Q6ZV73 1430 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms