RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 SCAPERQ9BY12 1400 aa35.94■■■■□ 3.34
PDLIM7-206ENST00000463411 ARID4BQ4LE39 1312 aaPredicted RBP35.94■■■■□ 3.34
PDLIM7-206ENST00000463411 EFCAB2Q5VUJ9 269 aa35.94■■■■□ 3.34
PDLIM7-206ENST00000463411 POGZQ7Z3K3 1410 aa35.93■■■■□ 3.34
PDLIM7-206ENST00000463411 ARHGAP5Q13017 1502 aa35.93■■■■□ 3.34
PDLIM7-206ENST00000463411 MAGI2Q86UL8 1455 aa35.92■■■■□ 3.34
PDLIM7-206ENST00000463411 HECW2Q9P2P5 1572 aa35.89■■■■□ 3.34
PDLIM7-206ENST00000463411 PREX2Q70Z35 1606 aa35.84■■■■□ 3.33
PDLIM7-206ENST00000463411 MADDQ8WXG6 1647 aa35.83■■■■□ 3.33
PDLIM7-206ENST00000463411 CDC42BPBQ9Y5S2 1711 aa35.83■■■■□ 3.33
PDLIM7-206ENST00000463411 YEATS2Q9ULM3 1422 aa35.83■■■■□ 3.33
PDLIM7-206ENST00000463411 PTPRMP28827 1452 aa35.81■■■■□ 3.32
PDLIM7-206ENST00000463411 ZNF518AQ6AHZ1 1483 aa35.8■■■■□ 3.32
PDLIM7-206ENST00000463411 RIMS1Q86UR5 1692 aaKnown RBP35.74■■■■□ 3.31
PDLIM7-206ENST00000463411 CDC42BPAQ5VT25 1732 aa35.73■■■■□ 3.31
PDLIM7-206ENST00000463411 KDM5CP41229 1560 aa35.72■■■■□ 3.31
PDLIM7-206ENST00000463411 SIGLEC1Q9BZZ2 1709 aa35.72■■■■□ 3.31
PDLIM7-206ENST00000463411 ATP10AO60312 1499 aa35.69■■■■□ 3.3
PDLIM7-206ENST00000463411 ABCC1P33527 1531 aa35.68■■■■□ 3.3
PDLIM7-206ENST00000463411 CEP162Q5TB80 1403 aa35.68■■■■□ 3.3
PDLIM7-206ENST00000463411 C9orf84Q5VXU9 1444 aa35.68■■■■□ 3.3
PDLIM7-206ENST00000463411 ITSN2Q9NZM3 1697 aa35.67■■■■□ 3.3
PDLIM7-206ENST00000463411 FER1L4A9Z1Z3 1794 aa35.62■■■■□ 3.29
PDLIM7-206ENST00000463411 MYT1LQ9UL68 1186 aa35.62■■■■□ 3.29
PDLIM7-206ENST00000463411 AFAP1Q8N556 730 aa35.61■■■■□ 3.29
PDLIM7-206ENST00000463411 MTUS2Q5JR59 1369 aa35.59■■■■□ 3.29
PDLIM7-206ENST00000463411 DIP2CQ9Y2E4 1556 aa35.57■■■■□ 3.28
PDLIM7-206ENST00000463411 MLECQ14165 292 aa35.57■■■■□ 3.28
PDLIM7-206ENST00000463411 MLH3Q9UHC1 1453 aa35.56■■■■□ 3.28
PDLIM7-206ENST00000463411 ARHGEF12Q9NZN5 1544 aa35.56■■■■□ 3.28
PDLIM7-206ENST00000463411 GPATCH8Q9UKJ3 1502 aaKnown RBP35.54■■■■□ 3.28
PDLIM7-206ENST00000463411 TRAPPC8Q9Y2L5 1435 aa35.54■■■■□ 3.28
PDLIM7-206ENST00000463411 ABCA6Q8N139 1617 aa35.54■■■■□ 3.28
PDLIM7-206ENST00000463411 SAMD9LQ8IVG5 1584 aa35.53■■■■□ 3.28
PDLIM7-206ENST00000463411 EHBP1L1Q8N3D4 1523 aa35.52■■■■□ 3.28
PDLIM7-206ENST00000463411 REREQ9P2R6 1566 aa35.52■■■■□ 3.28
PDLIM7-206ENST00000463411 CCNB3Q8WWL7 1395 aa35.51■■■■□ 3.27
PDLIM7-206ENST00000463411 ZNF777Q9ULD5 760 aaPredicted RBP35.5■■■■□ 3.27
PDLIM7-206ENST00000463411 SYCP2Q9BX26 1530 aa35.48■■■■□ 3.27
PDLIM7-206ENST00000463411 PLPPR3Q6T4P5 718 aa35.45■■■■□ 3.27
PDLIM7-206ENST00000463411 PLEKHH2Q8IVE3 1493 aa35.45■■■■□ 3.27
PDLIM7-206ENST00000463411 KIDINS220Q9ULH0 1771 aa35.45■■■■□ 3.27
PDLIM7-206ENST00000463411 LMTK3Q96Q04 1460 aa35.43■■■■□ 3.26
PDLIM7-206ENST00000463411 CFDP1Q9UEE9 299 aaPredicted RBP35.43■■■■□ 3.26
PDLIM7-206ENST00000463411 TIAM1Q13009 1591 aa35.41■■■■□ 3.26
PDLIM7-206ENST00000463411 AGLP35573 1532 aa35.38■■■■□ 3.25
PDLIM7-206ENST00000463411 KIAA1107Q9UPP5 1409 aa35.38■■■■□ 3.25
PDLIM7-206ENST00000463411 SUPT6HQ7KZ85 1726 aaKnown RBP35.34■■■■□ 3.25
PDLIM7-206ENST00000463411 LOC105371045A0A1W2PR82 267 aa35.33■■■■□ 3.25
PDLIM7-206ENST00000463411 HNRNPMP52272 730 aaKnown RBP eCLIP35.33■■■■□ 3.254e-8■■■■■ 27.6
PDLIM7-206ENST00000463411 SPAG9O60271 1321 aaKnown RBP35.32■■■■□ 3.25
PDLIM7-206ENST00000463411 ATP7AQ04656 1500 aa35.32■■■■□ 3.24
PDLIM7-206ENST00000463411 VPS8Q8N3P4 1428 aa35.31■■■■□ 3.24
PDLIM7-206ENST00000463411 INO80Q9ULG1 1556 aaPredicted RBP35.3■■■■□ 3.24
PDLIM7-206ENST00000463411 PREX1Q8TCU6 1659 aa35.27■■■■□ 3.24
PDLIM7-206ENST00000463411 ESF1Q9H501 851 aaKnown RBP35.25■■■■□ 3.23
PDLIM7-206ENST00000463411 NCOA2Q15596 1464 aa35.24■■■■□ 3.23
PDLIM7-206ENST00000463411 C3P01024 1663 aa35.2■■■■□ 3.23
PDLIM7-206ENST00000463411 CEBPAP49715 358 aaPredicted RBP35.19■■■■□ 3.22
PDLIM7-206ENST00000463411 HSPA2P54652 639 aa35.18■■■■□ 3.22
PDLIM7-206ENST00000463411 ADGBQ8N7X0 1667 aa35.17■■■■□ 3.22
PDLIM7-206ENST00000463411 CNTLNQ9NXG0 1405 aa35.17■■■■□ 3.22
PDLIM7-206ENST00000463411 ZNF644Q9H582 1327 aaPredicted RBP35.17■■■■□ 3.22
PDLIM7-206ENST00000463411 PLXNC1O60486 1568 aa35.17■■■■□ 3.22
PDLIM7-206ENST00000463411 A2MP01023 1474 aa35.16■■■■□ 3.22
PDLIM7-206ENST00000463411 ILDR1Q86SU0 546 aaPredicted RBP35.15■■■■□ 3.22
PDLIM7-206ENST00000463411 MBD5Q9P267 1494 aa35.15■■■■□ 3.22
PDLIM7-206ENST00000463411 LRRC9Q6ZRR7 1453 aa35.14■■■■□ 3.22
PDLIM7-206ENST00000463411 CAMSAP2Q08AD1 1489 aa35.13■■■■□ 3.21
PDLIM7-206ENST00000463411 MROH2AA6NES4 1674 aa35.11■■■■□ 3.21
PDLIM7-206ENST00000463411 UHRF1BP1Q6BDS2 1440 aa35.11■■■■□ 3.21
PDLIM7-206ENST00000463411 MAP3K1Q13233 1512 aa35.11■■■■□ 3.21
PDLIM7-206ENST00000463411 SETD1BQ9UPS6 1966 aaKnown RBP35.1■■■■□ 3.21
PDLIM7-206ENST00000463411 CCDC141Q6ZP82 1450 aa35.08■■■■□ 3.21
PDLIM7-206ENST00000463411 RTEL1-TNFRSF6BF6WH68 1400 aa35.07■■■■□ 3.21
PDLIM7-206ENST00000463411 CLTCQ00610 1675 aaKnown RBP35.01■■■■□ 3.2
PDLIM7-206ENST00000463411 ARHGEF5Q12774 1597 aa35■■■■□ 3.19
PDLIM7-206ENST00000463411 RSPH4AQ5TD94 716 aa35■■■■□ 3.19
PDLIM7-206ENST00000463411 GGT6Q6P531 493 aa34.94■■■■□ 3.18
PDLIM7-206ENST00000463411 NPATQ14207 1427 aa34.94■■■■□ 3.18
PDLIM7-206ENST00000463411 ZMYM3Q14202 1370 aa34.93■■■■□ 3.18
PDLIM7-206ENST00000463411 DHX29Q7Z478 1369 aaKnown RBP34.92■■■■□ 3.18
PDLIM7-206ENST00000463411 KANK4Q5T7N3 995 aaPredicted RBP34.92■■■■□ 3.18
PDLIM7-206ENST00000463411 APLP2Q06481 763 aa34.91■■■■□ 3.18
PDLIM7-206ENST00000463411 MYOM3Q5VTT5 1437 aa34.89■■■■□ 3.18
PDLIM7-206ENST00000463411 PPP6R1Q9UPN7 881 aa34.89■■■■□ 3.18
PDLIM7-206ENST00000463411 STRCQ7RTU9 1775 aa34.88■■■■□ 3.17
PDLIM7-206ENST00000463411 MIA2Q96PC5 1412 aa34.88■■■■□ 3.17
PDLIM7-206ENST00000463411 TSPY4P0CV99 314 aa34.87■■■■□ 3.17
PDLIM7-206ENST00000463411 TSPY10P0CW01 314 aa34.87■■■■□ 3.17
PDLIM7-206ENST00000463411 FBXO41Q8TF61 875 aa34.85■■■■□ 3.17
PDLIM7-206ENST00000463411 DMRT2Q9Y5R5 561 aa34.84■■■■□ 3.17
PDLIM7-206ENST00000463411 MAST1Q9Y2H9 1570 aa34.83■■■■□ 3.17
PDLIM7-206ENST00000463411 FAM135AQ9P2D6 1515 aa34.81■■■■□ 3.16
PDLIM7-206ENST00000463411 MYO3AQ8NEV4 1616 aa34.81■■■■□ 3.16
PDLIM7-206ENST00000463411 KIF3BO15066 747 aa34.79■■■■□ 3.16
PDLIM7-206ENST00000463411 KDM5DQ9BY66 1539 aa34.78■■■■□ 3.16
PDLIM7-206ENST00000463411 ZNF142P52746 1687 aaPredicted RBP34.78■■■■□ 3.16
PDLIM7-206ENST00000463411 PTPRKQ15262 1439 aa34.78■■■■□ 3.16
PDLIM7-206ENST00000463411 NCOA1Q15788 1441 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms