RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 DENND4BO75064 1496 aaPredicted RBP13.17□□□□□ -0.3
PGBD2-203ENST00000462488 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
PGBD2-203ENST00000462488 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
PGBD2-203ENST00000462488 SCAPERQ9BY12 1400 aa13.15□□□□□ -0.3
PGBD2-203ENST00000462488 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
PGBD2-203ENST00000462488 CCNB3Q8WWL7 1395 aa13.13□□□□□ -0.31
PGBD2-203ENST00000462488 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
PGBD2-203ENST00000462488 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
PGBD2-203ENST00000462488 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
PGBD2-203ENST00000462488 RICTORQ6R327 1708 aa13.09□□□□□ -0.31
PGBD2-203ENST00000462488 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
PGBD2-203ENST00000462488 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
PGBD2-203ENST00000462488 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.31
PGBD2-203ENST00000462488 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
PGBD2-203ENST00000462488 FRMPD1Q5SYB0 1578 aa13.07□□□□□ -0.32
PGBD2-203ENST00000462488 POGZQ7Z3K3 1410 aa13.07□□□□□ -0.32
PGBD2-203ENST00000462488 HNRNPMP52272 730 aaKnown RBP eCLIP13.06□□□□□ -0.32
PGBD2-203ENST00000462488 MLECQ14165 292 aa13.06□□□□□ -0.32
PGBD2-203ENST00000462488 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
PGBD2-203ENST00000462488 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
PGBD2-203ENST00000462488 ZNF518AQ6AHZ1 1483 aa13.05□□□□□ -0.32
PGBD2-203ENST00000462488 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
PGBD2-203ENST00000462488 PLPPR3Q6T4P5 718 aa13.05□□□□□ -0.32
PGBD2-203ENST00000462488 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
PGBD2-203ENST00000462488 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
PGBD2-203ENST00000462488 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
PGBD2-203ENST00000462488 ARHGEF40Q8TER5 1519 aa13.03□□□□□ -0.32
PGBD2-203ENST00000462488 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.32
PGBD2-203ENST00000462488 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
PGBD2-203ENST00000462488 NCOA2Q15596 1464 aa13.02□□□□□ -0.33
PGBD2-203ENST00000462488 ZMYM4Q5VZL5 1548 aa13.02□□□□□ -0.33
PGBD2-203ENST00000462488 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
PGBD2-203ENST00000462488 TRAPPC8Q9Y2L5 1435 aa13.01□□□□□ -0.33
PGBD2-203ENST00000462488 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
PGBD2-203ENST00000462488 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
PGBD2-203ENST00000462488 ABCC1P33527 1531 aa13.01□□□□□ -0.33
PGBD2-203ENST00000462488 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
PGBD2-203ENST00000462488 ATP10AO60312 1499 aa13□□□□□ -0.33
PGBD2-203ENST00000462488 ZNF644Q9H582 1327 aaPredicted RBP13□□□□□ -0.33
PGBD2-203ENST00000462488 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
PGBD2-203ENST00000462488 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
PGBD2-203ENST00000462488 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
PGBD2-203ENST00000462488 ESF1Q9H501 851 aaKnown RBP12.98□□□□□ -0.33
PGBD2-203ENST00000462488 C9orf84Q5VXU9 1444 aa12.97□□□□□ -0.33
PGBD2-203ENST00000462488 MAP3K1Q13233 1512 aa12.97□□□□□ -0.33
PGBD2-203ENST00000462488 KDM5CP41229 1560 aa12.96□□□□□ -0.33
PGBD2-203ENST00000462488 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.34
PGBD2-203ENST00000462488 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.34
PGBD2-203ENST00000462488 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
PGBD2-203ENST00000462488 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
PGBD2-203ENST00000462488 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
PGBD2-203ENST00000462488 CAMSAP2Q08AD1 1489 aa12.93□□□□□ -0.34
PGBD2-203ENST00000462488 MADDQ8WXG6 1647 aa12.93□□□□□ -0.34
PGBD2-203ENST00000462488 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
PGBD2-203ENST00000462488 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
PGBD2-203ENST00000462488 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
PGBD2-203ENST00000462488 ADAMTSL3P82987 1691 aa12.92□□□□□ -0.34
PGBD2-203ENST00000462488 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
PGBD2-203ENST00000462488 PTPRMP28827 1452 aa12.91□□□□□ -0.34
PGBD2-203ENST00000462488 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
PGBD2-203ENST00000462488 KIDINS220Q9ULH0 1771 aa12.91□□□□□ -0.34
PGBD2-203ENST00000462488 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
PGBD2-203ENST00000462488 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
PGBD2-203ENST00000462488 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
PGBD2-203ENST00000462488 SIGLEC1Q9BZZ2 1709 aa12.89□□□□□ -0.35
PGBD2-203ENST00000462488 GGT6Q6P531 493 aa12.89□□□□□ -0.35
PGBD2-203ENST00000462488 CCDC141Q6ZP82 1450 aa12.89□□□□□ -0.35
PGBD2-203ENST00000462488 FAM50AQ14320 339 aaKnown RBP12.88□□□□□ -0.35
PGBD2-203ENST00000462488 A2MP01023 1474 aa12.87□□□□□ -0.35
PGBD2-203ENST00000462488 MBD5Q9P267 1494 aa12.87□□□□□ -0.35
PGBD2-203ENST00000462488 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
PGBD2-203ENST00000462488 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
PGBD2-203ENST00000462488 INO80Q9ULG1 1556 aaPredicted RBP12.86□□□□□ -0.35
PGBD2-203ENST00000462488 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
PGBD2-203ENST00000462488 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
PGBD2-203ENST00000462488 KIF3BO15066 747 aa12.84□□□□□ -0.35
PGBD2-203ENST00000462488 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
PGBD2-203ENST00000462488 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
PGBD2-203ENST00000462488 AGLP35573 1532 aa12.83□□□□□ -0.36
PGBD2-203ENST00000462488 ARHGEF5Q12774 1597 aa12.82□□□□□ -0.36
PGBD2-203ENST00000462488 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
PGBD2-203ENST00000462488 CHIC2Q9UKJ5 165 aa12.82□□□□□ -0.36
PGBD2-203ENST00000462488 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
PGBD2-203ENST00000462488 RRP7BPQ9NSQ0 103 aa12.8□□□□□ -0.36
PGBD2-203ENST00000462488 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
PGBD2-203ENST00000462488 ITGAEP38570 1179 aa12.78□□□□□ -0.36
PGBD2-203ENST00000462488 WASHC2CQ9Y4E1 1318 aa12.78□□□□□ -0.36
PGBD2-203ENST00000462488 HSPA2P54652 639 aa12.77□□□□□ -0.37
PGBD2-203ENST00000462488 PLXNC1O60486 1568 aa12.77□□□□□ -0.37
PGBD2-203ENST00000462488 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
PGBD2-203ENST00000462488 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
PGBD2-203ENST00000462488 ABCC5O15440 1437 aa12.76□□□□□ -0.37
PGBD2-203ENST00000462488 DAPK1P53355 1430 aa12.76□□□□□ -0.37
PGBD2-203ENST00000462488 CLTCQ00610 1675 aaKnown RBP12.76□□□□□ -0.37
PGBD2-203ENST00000462488 C3P01024 1663 aa12.75□□□□□ -0.37
PGBD2-203ENST00000462488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
PGBD2-203ENST00000462488 KIF15Q9NS87 1388 aa12.75□□□□□ -0.37
PGBD2-203ENST00000462488 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
PGBD2-203ENST00000462488 MAST1Q9Y2H9 1570 aa12.74□□□□□ -0.37
PGBD2-203ENST00000462488 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms