RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 FANCAO15360 1455 aa16.67■□□□□ 0.26
HDLBP-230ENST00000462130 PTPRMP28827 1452 aa16.67■□□□□ 0.26
HDLBP-230ENST00000462130 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
HDLBP-230ENST00000462130 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
HDLBP-230ENST00000462130 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-230ENST00000462130 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
HDLBP-230ENST00000462130 MADDQ8WXG6 1647 aa16.65■□□□□ 0.26
HDLBP-230ENST00000462130 ARHGEF40Q8TER5 1519 aa16.65■□□□□ 0.26
HDLBP-230ENST00000462130 HECW1Q76N89 1606 aa16.62■□□□□ 0.25
HDLBP-230ENST00000462130 RIMS1Q86UR5 1692 aaKnown RBP16.62■□□□□ 0.25
HDLBP-230ENST00000462130 FMN1Q68DA7 1419 aa16.61■□□□□ 0.25
HDLBP-230ENST00000462130 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
HDLBP-230ENST00000462130 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
HDLBP-230ENST00000462130 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
HDLBP-230ENST00000462130 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
HDLBP-230ENST00000462130 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
HDLBP-230ENST00000462130 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
HDLBP-230ENST00000462130 PLCH2O75038 1416 aa16.57■□□□□ 0.24
HDLBP-230ENST00000462130 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
HDLBP-230ENST00000462130 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
HDLBP-230ENST00000462130 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
HDLBP-230ENST00000462130 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
HDLBP-230ENST00000462130 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
HDLBP-230ENST00000462130 KIF14Q15058 1648 aa16.53■□□□□ 0.24
HDLBP-230ENST00000462130 MLECQ14165 292 aa16.53■□□□□ 0.24
HDLBP-230ENST00000462130 FER1L4A9Z1Z3 1794 aa16.53■□□□□ 0.24
HDLBP-230ENST00000462130 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
HDLBP-230ENST00000462130 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
HDLBP-230ENST00000462130 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
HDLBP-230ENST00000462130 CLIP1P30622 1438 aa16.5■□□□□ 0.23
HDLBP-230ENST00000462130 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-230ENST00000462130 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
HDLBP-230ENST00000462130 ATP10AO60312 1499 aa16.48■□□□□ 0.23
HDLBP-230ENST00000462130 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
HDLBP-230ENST00000462130 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
HDLBP-230ENST00000462130 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
HDLBP-230ENST00000462130 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
HDLBP-230ENST00000462130 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
HDLBP-230ENST00000462130 HSPA2P54652 639 aa16.44■□□□□ 0.22
HDLBP-230ENST00000462130 AFAP1Q8N556 730 aa16.42■□□□□ 0.22
HDLBP-230ENST00000462130 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
HDLBP-230ENST00000462130 ARHGEF12Q9NZN5 1544 aa16.41■□□□□ 0.22
HDLBP-230ENST00000462130 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
HDLBP-230ENST00000462130 KDM5CP41229 1560 aa16.4■□□□□ 0.22
HDLBP-230ENST00000462130 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
HDLBP-230ENST00000462130 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
HDLBP-230ENST00000462130 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
HDLBP-230ENST00000462130 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
HDLBP-230ENST00000462130 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
HDLBP-230ENST00000462130 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
HDLBP-230ENST00000462130 SETD1BQ9UPS6 1966 aaKnown RBP16.37■□□□□ 0.21
HDLBP-230ENST00000462130 CEBPAP49715 358 aaPredicted RBP16.36■□□□□ 0.21
HDLBP-230ENST00000462130 ABCC1P33527 1531 aa16.35■□□□□ 0.21
HDLBP-230ENST00000462130 ABCA6Q8N139 1617 aa16.35■□□□□ 0.21
HDLBP-230ENST00000462130 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
HDLBP-230ENST00000462130 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
HDLBP-230ENST00000462130 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
HDLBP-230ENST00000462130 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
HDLBP-230ENST00000462130 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
HDLBP-230ENST00000462130 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.2
HDLBP-230ENST00000462130 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
HDLBP-230ENST00000462130 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-230ENST00000462130 C3P01024 1663 aa16.3■□□□□ 0.2
HDLBP-230ENST00000462130 UHRF1BP1Q6BDS2 1440 aa16.29■□□□□ 0.2
HDLBP-230ENST00000462130 AGLP35573 1532 aa16.28■□□□□ 0.2
HDLBP-230ENST00000462130 CERKQ8TCT0 537 aa16.27■□□□□ 0.2
HDLBP-230ENST00000462130 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
HDLBP-230ENST00000462130 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
HDLBP-230ENST00000462130 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
HDLBP-230ENST00000462130 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
HDLBP-230ENST00000462130 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
HDLBP-230ENST00000462130 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
HDLBP-230ENST00000462130 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■■■■ 30
HDLBP-230ENST00000462130 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
HDLBP-230ENST00000462130 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
HDLBP-230ENST00000462130 MTUS2Q5JR59 1369 aa16.22■□□□□ 0.19
HDLBP-230ENST00000462130 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
HDLBP-230ENST00000462130 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
HDLBP-230ENST00000462130 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
HDLBP-230ENST00000462130 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
HDLBP-230ENST00000462130 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
HDLBP-230ENST00000462130 CLTCQ00610 1675 aaKnown RBP16.17■□□□□ 0.18
HDLBP-230ENST00000462130 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
HDLBP-230ENST00000462130 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
HDLBP-230ENST00000462130 LOC105371045A0A1W2PR82 267 aa16.15■□□□□ 0.18
HDLBP-230ENST00000462130 A2MP01023 1474 aa16.15■□□□□ 0.18
HDLBP-230ENST00000462130 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
HDLBP-230ENST00000462130 ZMYM3Q14202 1370 aa16.14■□□□□ 0.17
HDLBP-230ENST00000462130 PTPRTO14522 1441 aa16.14■□□□□ 0.17
HDLBP-230ENST00000462130 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
HDLBP-230ENST00000462130 GGT6Q6P531 493 aa16.13■□□□□ 0.17
HDLBP-230ENST00000462130 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
HDLBP-230ENST00000462130 NPATQ14207 1427 aa16.12■□□□□ 0.17
HDLBP-230ENST00000462130 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
HDLBP-230ENST00000462130 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
HDLBP-230ENST00000462130 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
HDLBP-230ENST00000462130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.177e-13■□□□□ 10.6
HDLBP-230ENST00000462130 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-230ENST00000462130 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
HDLBP-230ENST00000462130 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms