RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 MAGI2Q86UL8 1455 aa21.24■□□□□ 0.99
C9orf3-210ENST00000462125 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
C9orf3-210ENST00000462125 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
C9orf3-210ENST00000462125 POGZQ7Z3K3 1410 aa21.22■□□□□ 0.99
C9orf3-210ENST00000462125 ARHGAP5Q13017 1502 aa21.2■□□□□ 0.98
C9orf3-210ENST00000462125 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-210ENST00000462125 YEATS2Q9ULM3 1422 aa21.19■□□□□ 0.98
C9orf3-210ENST00000462125 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
C9orf3-210ENST00000462125 ARHGEF40Q8TER5 1519 aa21.18■□□□□ 0.98
C9orf3-210ENST00000462125 CDC42BPBQ9Y5S2 1711 aa21.16■□□□□ 0.98
C9orf3-210ENST00000462125 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
C9orf3-210ENST00000462125 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
C9orf3-210ENST00000462125 ZNF518AQ6AHZ1 1483 aa21.14■□□□□ 0.98
C9orf3-210ENST00000462125 GPATCH8Q9UKJ3 1502 aaKnown RBP21.13■□□□□ 0.97
C9orf3-210ENST00000462125 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
C9orf3-210ENST00000462125 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
C9orf3-210ENST00000462125 MTUS2Q5JR59 1369 aa21.11■□□□□ 0.97
C9orf3-210ENST00000462125 ATP10AO60312 1499 aa21.11■□□□□ 0.97
C9orf3-210ENST00000462125 ARHGEF12Q9NZN5 1544 aa21.1■□□□□ 0.97
C9orf3-210ENST00000462125 PTPRMP28827 1452 aa21.1■□□□□ 0.97
C9orf3-210ENST00000462125 KDM5CP41229 1560 aa21.1■□□□□ 0.97
C9orf3-210ENST00000462125 CDC42BPAQ5VT25 1732 aa21.08■□□□□ 0.97
C9orf3-210ENST00000462125 TRAPPC8Q9Y2L5 1435 aa21.08■□□□□ 0.97
C9orf3-210ENST00000462125 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
C9orf3-210ENST00000462125 CFDP1Q9UEE9 299 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-210ENST00000462125 ABCC1P33527 1531 aa21.07■□□□□ 0.96
C9orf3-210ENST00000462125 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
C9orf3-210ENST00000462125 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-210ENST00000462125 C9orf84Q5VXU9 1444 aa21.05■□□□□ 0.96
C9orf3-210ENST00000462125 SIGLEC1Q9BZZ2 1709 aa21.04■□□□□ 0.96
C9orf3-210ENST00000462125 KIAA1107Q9UPP5 1409 aa21.04■□□□□ 0.96
C9orf3-210ENST00000462125 MYT1LQ9UL68 1186 aa21.03■□□□□ 0.96
C9orf3-210ENST00000462125 MADDQ8WXG6 1647 aa21.03■□□□□ 0.96
C9orf3-210ENST00000462125 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
C9orf3-210ENST00000462125 HNRNPMP52272 730 aaKnown RBP eCLIP21.02■□□□□ 0.966e-7■■■□□ 18.3
C9orf3-210ENST00000462125 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
C9orf3-210ENST00000462125 MLECQ14165 292 aa21.01■□□□□ 0.95
C9orf3-210ENST00000462125 SAMD9LQ8IVG5 1584 aa21■□□□□ 0.95
C9orf3-210ENST00000462125 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
C9orf3-210ENST00000462125 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
C9orf3-210ENST00000462125 REREQ9P2R6 1566 aa20.97■□□□□ 0.95
C9orf3-210ENST00000462125 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
C9orf3-210ENST00000462125 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
C9orf3-210ENST00000462125 ZNF644Q9H582 1327 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-210ENST00000462125 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
C9orf3-210ENST00000462125 TIAM1Q13009 1591 aa20.94■□□□□ 0.94
C9orf3-210ENST00000462125 KIDINS220Q9ULH0 1771 aa20.93■□□□□ 0.94
C9orf3-210ENST00000462125 NCOA2Q15596 1464 aa20.93■□□□□ 0.94
C9orf3-210ENST00000462125 AGLP35573 1532 aa20.93■□□□□ 0.94
C9orf3-210ENST00000462125 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
C9orf3-210ENST00000462125 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
C9orf3-210ENST00000462125 RIMS1Q86UR5 1692 aaKnown RBP20.93■□□□□ 0.94
C9orf3-210ENST00000462125 FBXO41Q8TF61 875 aa20.92■□□□□ 0.94
C9orf3-210ENST00000462125 LRRC9Q6ZRR7 1453 aa20.91■□□□□ 0.94
C9orf3-210ENST00000462125 MBD5Q9P267 1494 aa20.91■□□□□ 0.94
C9orf3-210ENST00000462125 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-210ENST00000462125 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
C9orf3-210ENST00000462125 SUPT6HQ7KZ85 1726 aaKnown RBP20.87■□□□□ 0.93
C9orf3-210ENST00000462125 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
C9orf3-210ENST00000462125 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
C9orf3-210ENST00000462125 LMTK3Q96Q04 1460 aa20.85■□□□□ 0.93
C9orf3-210ENST00000462125 ATP7AQ04656 1500 aa20.84■□□□□ 0.93
C9orf3-210ENST00000462125 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-210ENST00000462125 RTEL1-TNFRSF6BF6WH68 1400 aa20.84■□□□□ 0.93
C9orf3-210ENST00000462125 INO80Q9ULG1 1556 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-210ENST00000462125 A2MP01023 1474 aa20.81■□□□□ 0.92
C9orf3-210ENST00000462125 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
C9orf3-210ENST00000462125 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
C9orf3-210ENST00000462125 APLP2Q06481 763 aa20.78■□□□□ 0.92
C9orf3-210ENST00000462125 CNTLNQ9NXG0 1405 aa20.78■□□□□ 0.92
C9orf3-210ENST00000462125 CCDC141Q6ZP82 1450 aa20.77■□□□□ 0.92
C9orf3-210ENST00000462125 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
C9orf3-210ENST00000462125 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
C9orf3-210ENST00000462125 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
C9orf3-210ENST00000462125 HSPA2P54652 639 aa20.76■□□□□ 0.91
C9orf3-210ENST00000462125 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
C9orf3-210ENST00000462125 TSPY4P0CV99 314 aa20.75■□□□□ 0.91
C9orf3-210ENST00000462125 TSPY10P0CW01 314 aa20.75■□□□□ 0.91
C9orf3-210ENST00000462125 MYOM3Q5VTT5 1437 aa20.74■□□□□ 0.91
C9orf3-210ENST00000462125 ARHGEF5Q12774 1597 aa20.72■□□□□ 0.91
C9orf3-210ENST00000462125 SETD1BQ9UPS6 1966 aaKnown RBP20.72■□□□□ 0.91
C9orf3-210ENST00000462125 GGT6Q6P531 493 aa20.72■□□□□ 0.91
C9orf3-210ENST00000462125 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
C9orf3-210ENST00000462125 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.91
C9orf3-210ENST00000462125 C3P01024 1663 aa20.69■□□□□ 0.9
C9orf3-210ENST00000462125 ILDR2Q71H61 639 aa20.67■□□□□ 0.9
C9orf3-210ENST00000462125 KIF3BO15066 747 aa20.66■□□□□ 0.9
C9orf3-210ENST00000462125 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
C9orf3-210ENST00000462125 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
C9orf3-210ENST00000462125 NPATQ14207 1427 aa20.65■□□□□ 0.9
C9orf3-210ENST00000462125 MROH2AA6NES4 1674 aa20.64■□□□□ 0.89
C9orf3-210ENST00000462125 MAST1Q9Y2H9 1570 aa20.62■□□□□ 0.89
C9orf3-210ENST00000462125 PTPRKQ15262 1439 aa20.6■□□□□ 0.89
C9orf3-210ENST00000462125 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.89
C9orf3-210ENST00000462125 ABCC5O15440 1437 aa20.58■□□□□ 0.88
C9orf3-210ENST00000462125 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.88
C9orf3-210ENST00000462125 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
C9orf3-210ENST00000462125 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
C9orf3-210ENST00000462125 WASHC2CQ9Y4E1 1318 aa20.56■□□□□ 0.88
C9orf3-210ENST00000462125 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms