RNA–Protein interactions for RNA: ENST00000461693.5

SDCCAG3-207, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-207ENST00000461693 ARHGAP5Q13017 1502 aa18.45■□□□□ 0.54
SDCCAG3-207ENST00000461693 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
SDCCAG3-207ENST00000461693 PLEKHH2Q8IVE3 1493 aa18.44■□□□□ 0.54
SDCCAG3-207ENST00000461693 KDM6BO15054 1643 aa18.42■□□□□ 0.54
SDCCAG3-207ENST00000461693 EFCAB2Q5VUJ9 269 aa18.42■□□□□ 0.54
SDCCAG3-207ENST00000461693 CDC42BPBQ9Y5S2 1711 aa18.42■□□□□ 0.54
SDCCAG3-207ENST00000461693 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
SDCCAG3-207ENST00000461693 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
SDCCAG3-207ENST00000461693 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
SDCCAG3-207ENST00000461693 KANK4Q5T7N3 995 aaPredicted RBP18.39■□□□□ 0.53
SDCCAG3-207ENST00000461693 ADGRL1O94910 1474 aa18.39■□□□□ 0.53
SDCCAG3-207ENST00000461693 ABCC1P33527 1531 aa18.38■□□□□ 0.53
SDCCAG3-207ENST00000461693 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
SDCCAG3-207ENST00000461693 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
SDCCAG3-207ENST00000461693 DENND4BO75064 1496 aaPredicted RBP18.35■□□□□ 0.53
SDCCAG3-207ENST00000461693 ZNF518AQ6AHZ1 1483 aa18.34■□□□□ 0.53
SDCCAG3-207ENST00000461693 POGZQ7Z3K3 1410 aa18.33■□□□□ 0.53
SDCCAG3-207ENST00000461693 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.52
SDCCAG3-207ENST00000461693 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.52
SDCCAG3-207ENST00000461693 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
SDCCAG3-207ENST00000461693 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
SDCCAG3-207ENST00000461693 CAMSAP2Q08AD1 1489 aa18.3■□□□□ 0.52
SDCCAG3-207ENST00000461693 MAGI2Q86UL8 1455 aa18.3■□□□□ 0.52
SDCCAG3-207ENST00000461693 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
SDCCAG3-207ENST00000461693 KDM5CP41229 1560 aa18.3■□□□□ 0.52
SDCCAG3-207ENST00000461693 TCOF1Q13428 1488 aaKnown RBP18.28■□□□□ 0.52
SDCCAG3-207ENST00000461693 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
SDCCAG3-207ENST00000461693 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
SDCCAG3-207ENST00000461693 FRMPD1Q5SYB0 1578 aa18.28■□□□□ 0.52
SDCCAG3-207ENST00000461693 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
SDCCAG3-207ENST00000461693 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
SDCCAG3-207ENST00000461693 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
SDCCAG3-207ENST00000461693 CCDC141Q6ZP82 1450 aa18.24■□□□□ 0.51
SDCCAG3-207ENST00000461693 HECW2Q9P2P5 1572 aa18.24■□□□□ 0.51
SDCCAG3-207ENST00000461693 MLH3Q9UHC1 1453 aa18.23■□□□□ 0.51
SDCCAG3-207ENST00000461693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
SDCCAG3-207ENST00000461693 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
SDCCAG3-207ENST00000461693 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
SDCCAG3-207ENST00000461693 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
SDCCAG3-207ENST00000461693 ARHGEF12Q9NZN5 1544 aa18.21■□□□□ 0.51
SDCCAG3-207ENST00000461693 SHANK2Q9UPX8 1470 aa18.2■□□□□ 0.5
SDCCAG3-207ENST00000461693 ZFYVE16Q7Z3T8 1539 aa18.2■□□□□ 0.5
SDCCAG3-207ENST00000461693 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
SDCCAG3-207ENST00000461693 INO80Q9ULG1 1556 aaPredicted RBP18.19■□□□□ 0.5
SDCCAG3-207ENST00000461693 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
SDCCAG3-207ENST00000461693 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
SDCCAG3-207ENST00000461693 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
SDCCAG3-207ENST00000461693 DNMT1P26358 1616 aaKnown RBP18.17■□□□□ 0.5
SDCCAG3-207ENST00000461693 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
SDCCAG3-207ENST00000461693 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
SDCCAG3-207ENST00000461693 CROCC2H7BZ55 1655 aa18.16■□□□□ 0.5
SDCCAG3-207ENST00000461693 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
SDCCAG3-207ENST00000461693 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
SDCCAG3-207ENST00000461693 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
SDCCAG3-207ENST00000461693 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.49
SDCCAG3-207ENST00000461693 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
SDCCAG3-207ENST00000461693 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
SDCCAG3-207ENST00000461693 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
SDCCAG3-207ENST00000461693 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
SDCCAG3-207ENST00000461693 DAPK1P53355 1430 aa18.12■□□□□ 0.49
SDCCAG3-207ENST00000461693 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
SDCCAG3-207ENST00000461693 C9orf84Q5VXU9 1444 aa18.11■□□□□ 0.49
SDCCAG3-207ENST00000461693 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
SDCCAG3-207ENST00000461693 ADGBQ8N7X0 1667 aa18.1■□□□□ 0.49
SDCCAG3-207ENST00000461693 ATP10AO60312 1499 aa18.1■□□□□ 0.49
SDCCAG3-207ENST00000461693 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
SDCCAG3-207ENST00000461693 ABCC5O15440 1437 aa18.08■□□□□ 0.49
SDCCAG3-207ENST00000461693 YEATS2Q9ULM3 1422 aa18.07■□□□□ 0.48
SDCCAG3-207ENST00000461693 AGLP35573 1532 aa18.07■□□□□ 0.48
SDCCAG3-207ENST00000461693 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
SDCCAG3-207ENST00000461693 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
SDCCAG3-207ENST00000461693 MYT1LQ9UL68 1186 aa18.05■□□□□ 0.48
SDCCAG3-207ENST00000461693 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
SDCCAG3-207ENST00000461693 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
SDCCAG3-207ENST00000461693 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
SDCCAG3-207ENST00000461693 A2MP01023 1474 aa18.03■□□□□ 0.48
SDCCAG3-207ENST00000461693 BCORL1Q5H9F3 1711 aa18.02■□□□□ 0.48
SDCCAG3-207ENST00000461693 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.47
SDCCAG3-207ENST00000461693 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
SDCCAG3-207ENST00000461693 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
SDCCAG3-207ENST00000461693 ERBINQ96RT1 1412 aa18■□□□□ 0.47
SDCCAG3-207ENST00000461693 DHX29Q7Z478 1369 aaKnown RBP17.99■□□□□ 0.47
SDCCAG3-207ENST00000461693 KIF15Q9NS87 1388 aa17.98■□□□□ 0.47
SDCCAG3-207ENST00000461693 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
SDCCAG3-207ENST00000461693 RNF17Q9BXT8 1623 aaKnown RBP17.93■□□□□ 0.46
SDCCAG3-207ENST00000461693 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
SDCCAG3-207ENST00000461693 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
SDCCAG3-207ENST00000461693 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
SDCCAG3-207ENST00000461693 GCC2Q8IWJ2 1684 aa17.9■□□□□ 0.46
SDCCAG3-207ENST00000461693 SIGLEC1Q9BZZ2 1709 aa17.9■□□□□ 0.46
SDCCAG3-207ENST00000461693 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
SDCCAG3-207ENST00000461693 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
SDCCAG3-207ENST00000461693 HFM1A2PYH4 1435 aa17.89■□□□□ 0.46
SDCCAG3-207ENST00000461693 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.46
SDCCAG3-207ENST00000461693 ANKRD50Q9ULJ7 1429 aa17.89■□□□□ 0.45
SDCCAG3-207ENST00000461693 PRDM15P57071 1507 aaPredicted RBP17.88■□□□□ 0.45
SDCCAG3-207ENST00000461693 DEPDC5O75140 1603 aa17.88■□□□□ 0.45
SDCCAG3-207ENST00000461693 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
SDCCAG3-207ENST00000461693 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
SDCCAG3-207ENST00000461693 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms