RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PREX2Q70Z35 1606 aa35.86■■■■□ 3.33
TRAF4-207ENST00000461195 SCAPERQ9BY12 1400 aa35.85■■■■□ 3.33
TRAF4-207ENST00000461195 MTUS2Q5JR59 1369 aa35.83■■■■□ 3.33
TRAF4-207ENST00000461195 HECW2Q9P2P5 1572 aa35.83■■■■□ 3.33
TRAF4-207ENST00000461195 ILDR1Q86SU0 546 aaPredicted RBP35.82■■■■□ 3.32
TRAF4-207ENST00000461195 VPS8Q8N3P4 1428 aa35.82■■■■□ 3.32
TRAF4-207ENST00000461195 CDC42BPAQ5VT25 1732 aa35.81■■■■□ 3.32
TRAF4-207ENST00000461195 ZMYM4Q5VZL5 1548 aa35.8■■■■□ 3.32
TRAF4-207ENST00000461195 POGZQ7Z3K3 1410 aa35.8■■■■□ 3.32
TRAF4-207ENST00000461195 ARHGEF40Q8TER5 1519 aa35.76■■■■□ 3.31
TRAF4-207ENST00000461195 EHBP1L1Q8N3D4 1523 aa35.75■■■■□ 3.31
TRAF4-207ENST00000461195 MAGI2Q86UL8 1455 aa35.73■■■■□ 3.31
TRAF4-207ENST00000461195 GPATCH8Q9UKJ3 1502 aaKnown RBP35.71■■■■□ 3.31
TRAF4-207ENST00000461195 ZFYVE16Q7Z3T8 1539 aa35.7■■■■□ 3.31
TRAF4-207ENST00000461195 TIAM1Q13009 1591 aa35.68■■■■□ 3.3
TRAF4-207ENST00000461195 ZNF518AQ6AHZ1 1483 aa35.68■■■■□ 3.3
TRAF4-207ENST00000461195 CCNB3Q8WWL7 1395 aa35.67■■■■□ 3.3
TRAF4-207ENST00000461195 ABCC1P33527 1531 aa35.67■■■■□ 3.3
TRAF4-207ENST00000461195 YEATS2Q9ULM3 1422 aa35.64■■■■□ 3.3
TRAF4-207ENST00000461195 ITSN2Q9NZM3 1697 aa35.62■■■■□ 3.29
TRAF4-207ENST00000461195 KDM5CP41229 1560 aa35.62■■■■□ 3.29
TRAF4-207ENST00000461195 AFAP1Q8N556 730 aa35.61■■■■□ 3.29
TRAF4-207ENST00000461195 ZNF777Q9ULD5 760 aaPredicted RBP35.6■■■■□ 3.29
TRAF4-207ENST00000461195 ARHGEF12Q9NZN5 1544 aa35.6■■■■□ 3.29
TRAF4-207ENST00000461195 SAMD9LQ8IVG5 1584 aa35.59■■■■□ 3.29
TRAF4-207ENST00000461195 CFDP1Q9UEE9 299 aaPredicted RBP35.59■■■■□ 3.29
TRAF4-207ENST00000461195 ARID4BQ4LE39 1312 aaPredicted RBP35.58■■■■□ 3.29
TRAF4-207ENST00000461195 SUPT6HQ7KZ85 1726 aaKnown RBP35.58■■■■□ 3.29
TRAF4-207ENST00000461195 MAP3K1Q13233 1512 aa35.56■■■■□ 3.28
TRAF4-207ENST00000461195 TRAPPC8Q9Y2L5 1435 aa35.56■■■■□ 3.28
TRAF4-207ENST00000461195 BCORL1Q5H9F3 1711 aa35.54■■■■□ 3.28
TRAF4-207ENST00000461195 LRRC9Q6ZRR7 1453 aa35.53■■■■□ 3.28
TRAF4-207ENST00000461195 ADAMTSL3P82987 1691 aa35.52■■■■□ 3.28
TRAF4-207ENST00000461195 ATP10AO60312 1499 aa35.52■■■■□ 3.28
TRAF4-207ENST00000461195 NCOA2Q15596 1464 aa35.52■■■■□ 3.28
TRAF4-207ENST00000461195 PLEKHH2Q8IVE3 1493 aa35.51■■■■□ 3.28
TRAF4-207ENST00000461195 SYCP2Q9BX26 1530 aa35.51■■■■□ 3.27
TRAF4-207ENST00000461195 MYT1LQ9UL68 1186 aa35.5■■■■□ 3.27
TRAF4-207ENST00000461195 MLH3Q9UHC1 1453 aa35.49■■■■□ 3.27
TRAF4-207ENST00000461195 SIGLEC1Q9BZZ2 1709 aa35.49■■■■□ 3.27
TRAF4-207ENST00000461195 C9orf84Q5VXU9 1444 aa35.48■■■■□ 3.27
TRAF4-207ENST00000461195 KIAA1107Q9UPP5 1409 aa35.48■■■■□ 3.27
TRAF4-207ENST00000461195 HNRNPMP52272 730 aaKnown RBP eCLIP35.45■■■■□ 3.27
TRAF4-207ENST00000461195 DIP2CQ9Y2E4 1556 aa35.43■■■■□ 3.26
TRAF4-207ENST00000461195 PTPRMP28827 1452 aa35.43■■■■□ 3.26
TRAF4-207ENST00000461195 KANK4Q5T7N3 995 aaPredicted RBP35.41■■■■□ 3.26
TRAF4-207ENST00000461195 ABCA6Q8N139 1617 aa35.41■■■■□ 3.26
TRAF4-207ENST00000461195 MADDQ8WXG6 1647 aa35.4■■■■□ 3.26
TRAF4-207ENST00000461195 APLP2Q06481 763 aa35.4■■■■□ 3.26
TRAF4-207ENST00000461195 KIDINS220Q9ULH0 1771 aa35.39■■■■□ 3.26
TRAF4-207ENST00000461195 ZNF644Q9H582 1327 aaPredicted RBP35.38■■■■□ 3.25
TRAF4-207ENST00000461195 REREQ9P2R6 1566 aa35.36■■■■□ 3.25
TRAF4-207ENST00000461195 SPAG9O60271 1321 aaKnown RBP35.34■■■■□ 3.25
TRAF4-207ENST00000461195 MLECQ14165 292 aa35.31■■■■□ 3.24
TRAF4-207ENST00000461195 RIMS1Q86UR5 1692 aaKnown RBP35.3■■■■□ 3.24
TRAF4-207ENST00000461195 MBD5Q9P267 1494 aa35.3■■■■□ 3.24
TRAF4-207ENST00000461195 CAMSAP2Q08AD1 1489 aa35.29■■■■□ 3.24
TRAF4-207ENST00000461195 ATP7AQ04656 1500 aa35.29■■■■□ 3.24
TRAF4-207ENST00000461195 INO80Q9ULG1 1556 aaPredicted RBP35.28■■■■□ 3.24
TRAF4-207ENST00000461195 FER1L4A9Z1Z3 1794 aa35.25■■■■□ 3.23
TRAF4-207ENST00000461195 AGLP35573 1532 aa35.24■■■■□ 3.23
TRAF4-207ENST00000461195 MYOM3Q5VTT5 1437 aa35.21■■■■□ 3.23
TRAF4-207ENST00000461195 RSPH4AQ5TD94 716 aa35.19■■■■□ 3.22
TRAF4-207ENST00000461195 CCDC141Q6ZP82 1450 aa35.19■■■■□ 3.22
TRAF4-207ENST00000461195 MIA2Q96PC5 1412 aa35.17■■■■□ 3.22
TRAF4-207ENST00000461195 ARHGEF5Q12774 1597 aa35.16■■■■□ 3.22
TRAF4-207ENST00000461195 RTEL1-TNFRSF6BF6WH68 1400 aa35.15■■■■□ 3.22
TRAF4-207ENST00000461195 ADGBQ8N7X0 1667 aa35.13■■■■□ 3.21
TRAF4-207ENST00000461195 A2MP01023 1474 aa35.12■■■■□ 3.21
TRAF4-207ENST00000461195 LMTK3Q96Q04 1460 aa35.11■■■■□ 3.21
TRAF4-207ENST00000461195 FBXO41Q8TF61 875 aa35.11■■■■□ 3.21
TRAF4-207ENST00000461195 PLXNC1O60486 1568 aa35.1■■■■□ 3.21
TRAF4-207ENST00000461195 PLPPR3Q6T4P5 718 aa35.09■■■■□ 3.21
TRAF4-207ENST00000461195 TSPY4P0CV99 314 aa35.05■■■■□ 3.2
TRAF4-207ENST00000461195 TSPY10P0CW01 314 aa35.05■■■■□ 3.2
TRAF4-207ENST00000461195 ESF1Q9H501 851 aaKnown RBP35.01■■■■□ 3.2
TRAF4-207ENST00000461195 PTPN23Q9H3S7 1636 aa35.01■■■■□ 3.19
TRAF4-207ENST00000461195 HSPA2P54652 639 aa34.98■■■■□ 3.19
TRAF4-207ENST00000461195 DHX29Q7Z478 1369 aaKnown RBP34.98■■■■□ 3.19
TRAF4-207ENST00000461195 FGD6Q6ZV73 1430 aa34.98■■■■□ 3.19
TRAF4-207ENST00000461195 MAST1Q9Y2H9 1570 aa34.97■■■■□ 3.19
TRAF4-207ENST00000461195 CNTLNQ9NXG0 1405 aa34.95■■■■□ 3.19
TRAF4-207ENST00000461195 CEBPAP49715 358 aaPredicted RBP34.94■■■■□ 3.18
TRAF4-207ENST00000461195 C3P01024 1663 aa34.92■■■■□ 3.18
TRAF4-207ENST00000461195 TCOF1Q13428 1488 aaKnown RBP34.91■■■■□ 3.18
TRAF4-207ENST00000461195 GGT6Q6P531 493 aa34.89■■■■□ 3.18
TRAF4-207ENST00000461195 MROH2AA6NES4 1674 aa34.88■■■■□ 3.17
TRAF4-207ENST00000461195 CROCC2H7BZ55 1655 aa34.87■■■■□ 3.17
TRAF4-207ENST00000461195 CLTCQ00610 1675 aaKnown RBP34.85■■■■□ 3.17
TRAF4-207ENST00000461195 ABCC5O15440 1437 aa34.84■■■■□ 3.17
TRAF4-207ENST00000461195 PPP6R1Q9UPN7 881 aa34.84■■■■□ 3.17
TRAF4-207ENST00000461195 DNMT1P26358 1616 aaKnown RBP34.84■■■■□ 3.17
TRAF4-207ENST00000461195 SHANK2Q9UPX8 1470 aa34.84■■■■□ 3.17
TRAF4-207ENST00000461195 PREX1Q8TCU6 1659 aa34.83■■■■□ 3.17
TRAF4-207ENST00000461195 KIF3BO15066 747 aa34.83■■■■□ 3.17
TRAF4-207ENST00000461195 DAPK1P53355 1430 aa34.81■■■■□ 3.16
TRAF4-207ENST00000461195 SETD1BQ9UPS6 1966 aaKnown RBP34.81■■■■□ 3.16
TRAF4-207ENST00000461195 ZMYM3Q14202 1370 aa34.79■■■■□ 3.16
TRAF4-207ENST00000461195 DUOX2Q9NRD8 1548 aa34.73■■■■□ 3.15
TRAF4-207ENST00000461195 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms