RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 HECW1Q76N89 1606 aa24.17■■□□□ 1.46
NCK1-202ENST00000460960 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
NCK1-202ENST00000460960 SCAPERQ9BY12 1400 aa24.15■■□□□ 1.46
NCK1-202ENST00000460960 MAGI2Q86UL8 1455 aa24.14■■□□□ 1.46
NCK1-202ENST00000460960 PLCH2O75038 1416 aa24.1■■□□□ 1.45
NCK1-202ENST00000460960 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
NCK1-202ENST00000460960 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.45
NCK1-202ENST00000460960 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
NCK1-202ENST00000460960 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
NCK1-202ENST00000460960 ATP10AO60312 1499 aa24.05■■□□□ 1.44
NCK1-202ENST00000460960 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
NCK1-202ENST00000460960 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
NCK1-202ENST00000460960 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
NCK1-202ENST00000460960 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
NCK1-202ENST00000460960 KIF14Q15058 1648 aa24.02■■□□□ 1.44
NCK1-202ENST00000460960 ARHGEF12Q9NZN5 1544 aa24.01■■□□□ 1.43
NCK1-202ENST00000460960 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
NCK1-202ENST00000460960 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
NCK1-202ENST00000460960 PREX1Q8TCU6 1659 aa23.99■■□□□ 1.43
NCK1-202ENST00000460960 ARHGAP35Q9NRY4 1499 aa23.97■■□□□ 1.43
NCK1-202ENST00000460960 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
NCK1-202ENST00000460960 CLIP1P30622 1438 aa23.95■■□□□ 1.42
NCK1-202ENST00000460960 AFAP1Q8N556 730 aa23.95■■□□□ 1.42
NCK1-202ENST00000460960 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
NCK1-202ENST00000460960 KDM5CP41229 1560 aa23.9■■□□□ 1.42
NCK1-202ENST00000460960 UHRF1BP1Q6BDS2 1440 aa23.89■■□□□ 1.41
NCK1-202ENST00000460960 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
NCK1-202ENST00000460960 DIP2CQ9Y2E4 1556 aa23.88■■□□□ 1.41
NCK1-202ENST00000460960 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
NCK1-202ENST00000460960 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
NCK1-202ENST00000460960 CDC42BPBQ9Y5S2 1711 aa23.85■■□□□ 1.41
NCK1-202ENST00000460960 STRCQ7RTU9 1775 aa23.85■■□□□ 1.41
NCK1-202ENST00000460960 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
NCK1-202ENST00000460960 SETD1BQ9UPS6 1966 aaKnown RBP23.83■■□□□ 1.41
NCK1-202ENST00000460960 C3P01024 1663 aa23.81■■□□□ 1.4
NCK1-202ENST00000460960 PREX2Q70Z35 1606 aa23.81■■□□□ 1.4
NCK1-202ENST00000460960 REREQ9P2R6 1566 aa23.79■■□□□ 1.4
NCK1-202ENST00000460960 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
NCK1-202ENST00000460960 MLH3Q9UHC1 1453 aa23.79■■□□□ 1.4
NCK1-202ENST00000460960 ABCC1P33527 1531 aa23.79■■□□□ 1.4
NCK1-202ENST00000460960 ITSN2Q9NZM3 1697 aa23.78■■□□□ 1.4
NCK1-202ENST00000460960 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
NCK1-202ENST00000460960 DISP3Q9P2K9 1392 aa23.77■■□□□ 1.4
NCK1-202ENST00000460960 CCDC18Q5T9S5 1454 aa23.75■■□□□ 1.39
NCK1-202ENST00000460960 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
NCK1-202ENST00000460960 AGLP35573 1532 aa23.73■■□□□ 1.39
NCK1-202ENST00000460960 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
NCK1-202ENST00000460960 CDC42BPAQ5VT25 1732 aa23.72■■□□□ 1.39
NCK1-202ENST00000460960 KIDINS220Q9ULH0 1771 aa23.72■■□□□ 1.39
NCK1-202ENST00000460960 PTPRTO14522 1441 aa23.7■■□□□ 1.38
NCK1-202ENST00000460960 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
NCK1-202ENST00000460960 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
NCK1-202ENST00000460960 SYCP2Q9BX26 1530 aa23.64■■□□□ 1.38
NCK1-202ENST00000460960 ILDR2Q71H61 639 aa23.64■■□□□ 1.37
NCK1-202ENST00000460960 SUPT6HQ7KZ85 1726 aaKnown RBP23.64■■□□□ 1.37
NCK1-202ENST00000460960 NCOA1Q15788 1441 aa23.63■■□□□ 1.37
NCK1-202ENST00000460960 SPAG9O60271 1321 aaKnown RBP23.62■■□□□ 1.37
NCK1-202ENST00000460960 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
NCK1-202ENST00000460960 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.374e-6■■■■□ 20
NCK1-202ENST00000460960 CAMSAP1Q5T5Y3 1602 aa23.6■■□□□ 1.37
NCK1-202ENST00000460960 LTBP4Q8N2S1 1624 aa23.59■■□□□ 1.37
NCK1-202ENST00000460960 SPATA31D1Q6ZQQ2 1576 aa23.59■■□□□ 1.37
NCK1-202ENST00000460960 MROH2AA6NES4 1674 aa23.59■■□□□ 1.37
NCK1-202ENST00000460960 ZMYM3Q14202 1370 aa23.57■■□□□ 1.36
NCK1-202ENST00000460960 GPATCH8Q9UKJ3 1502 aaKnown RBP23.57■■□□□ 1.36
NCK1-202ENST00000460960 NPATQ14207 1427 aa23.57■■□□□ 1.36
NCK1-202ENST00000460960 CLTCQ00610 1675 aaKnown RBP23.57■■□□□ 1.36
NCK1-202ENST00000460960 ATP7AQ04656 1500 aa23.56■■□□□ 1.36
NCK1-202ENST00000460960 NCKAP5LQ9HCH0 1330 aa23.56■■□□□ 1.36
NCK1-202ENST00000460960 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
NCK1-202ENST00000460960 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
NCK1-202ENST00000460960 SOCS7O14512 581 aa23.54■■□□□ 1.36
NCK1-202ENST00000460960 GGT6Q6P531 493 aa23.53■■□□□ 1.36
NCK1-202ENST00000460960 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
NCK1-202ENST00000460960 A2MP01023 1474 aa23.51■■□□□ 1.35
NCK1-202ENST00000460960 IQSEC2Q5JU85 1478 aa23.51■■□□□ 1.35
NCK1-202ENST00000460960 PLEKHH2Q8IVE3 1493 aa23.5■■□□□ 1.35
NCK1-202ENST00000460960 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
NCK1-202ENST00000460960 MYO3AQ8NEV4 1616 aa23.5■■□□□ 1.35
NCK1-202ENST00000460960 ZNF335Q9H4Z2 1342 aaPredicted RBP23.49■■□□□ 1.35
NCK1-202ENST00000460960 MTUS2Q5JR59 1369 aa23.48■■□□□ 1.35
NCK1-202ENST00000460960 KIAA1107Q9UPP5 1409 aa23.48■■□□□ 1.35
NCK1-202ENST00000460960 PLXNC1O60486 1568 aa23.48■■□□□ 1.35
NCK1-202ENST00000460960 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
NCK1-202ENST00000460960 ZNF142P52746 1687 aaPredicted RBP23.46■■□□□ 1.35
NCK1-202ENST00000460960 CEP170BQ9Y4F5 1589 aaPredicted RBP23.46■■□□□ 1.35
NCK1-202ENST00000460960 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
NCK1-202ENST00000460960 PKD2Q13563 968 aa23.44■■□□□ 1.34
NCK1-202ENST00000460960 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
NCK1-202ENST00000460960 PLA2R1Q13018 1463 aa23.42■■□□□ 1.34
NCK1-202ENST00000460960 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
NCK1-202ENST00000460960 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
NCK1-202ENST00000460960 TCOF1Q13428 1488 aaKnown RBP23.37■■□□□ 1.33
NCK1-202ENST00000460960 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
NCK1-202ENST00000460960 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
NCK1-202ENST00000460960 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
NCK1-202ENST00000460960 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
NCK1-202ENST00000460960 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
NCK1-202ENST00000460960 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
NCK1-202ENST00000460960 KIF3BO15066 747 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms