RNA–Protein interactions for RNA: ENST00000460610.1

RAF1-206, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 3

Gene RAF1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-206ENST00000460610 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
RAF1-206ENST00000460610 ZMYM4Q5VZL5 1548 aa12.46□□□□□ -0.42
RAF1-206ENST00000460610 FANCAO15360 1455 aa12.46□□□□□ -0.42
RAF1-206ENST00000460610 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
RAF1-206ENST00000460610 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
RAF1-206ENST00000460610 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
RAF1-206ENST00000460610 ZFYVE16Q7Z3T8 1539 aa12.43□□□□□ -0.42
RAF1-206ENST00000460610 PRXQ9BXM0 1461 aa12.43□□□□□ -0.42
RAF1-206ENST00000460610 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
RAF1-206ENST00000460610 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
RAF1-206ENST00000460610 NUP153P49790 1475 aaKnown RBP12.42□□□□□ -0.42
RAF1-206ENST00000460610 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
RAF1-206ENST00000460610 LTBP4Q8N2S1 1624 aa12.41□□□□□ -0.42
RAF1-206ENST00000460610 SAMD9Q5K651 1589 aa12.41□□□□□ -0.42
RAF1-206ENST00000460610 EFCAB5A4FU69 1503 aa12.41□□□□□ -0.42
RAF1-206ENST00000460610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAF1-206ENST00000460610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
RAF1-206ENST00000460610 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
RAF1-206ENST00000460610 CFAP74Q9C0B2 1584 aa12.39□□□□□ -0.43
RAF1-206ENST00000460610 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
RAF1-206ENST00000460610 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
RAF1-206ENST00000460610 PTPRTO14522 1441 aa12.36□□□□□ -0.43
RAF1-206ENST00000460610 ATP10AO60312 1499 aa12.34□□□□□ -0.43
RAF1-206ENST00000460610 C3P01024 1663 aa12.34□□□□□ -0.43
RAF1-206ENST00000460610 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
RAF1-206ENST00000460610 PLEKHD1A6NEE1 506 aa12.33□□□□□ -0.44
RAF1-206ENST00000460610 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
RAF1-206ENST00000460610 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
RAF1-206ENST00000460610 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
RAF1-206ENST00000460610 IQSEC2Q5JU85 1478 aa12.3□□□□□ -0.44
RAF1-206ENST00000460610 PLCH2O75038 1416 aa12.28□□□□□ -0.44
RAF1-206ENST00000460610 CDK13Q14004 1512 aaKnown RBP12.28□□□□□ -0.44
RAF1-206ENST00000460610 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
RAF1-206ENST00000460610 NCOA1Q15788 1441 aa12.27□□□□□ -0.45
RAF1-206ENST00000460610 DIP2CQ9Y2E4 1556 aa12.26□□□□□ -0.45
RAF1-206ENST00000460610 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
RAF1-206ENST00000460610 AFAP1Q8N556 730 aa12.25□□□□□ -0.45
RAF1-206ENST00000460610 MYO5CQ9NQX4 1742 aa12.25□□□□□ -0.45
RAF1-206ENST00000460610 KDM5CP41229 1560 aa12.24□□□□□ -0.45
RAF1-206ENST00000460610 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
RAF1-206ENST00000460610 ZNF335Q9H4Z2 1342 aaPredicted RBP12.24□□□□□ -0.45
RAF1-206ENST00000460610 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
RAF1-206ENST00000460610 UBAP1LF5GYI3 381 aa12.23□□□□□ -0.45
RAF1-206ENST00000460610 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
RAF1-206ENST00000460610 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
RAF1-206ENST00000460610 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
RAF1-206ENST00000460610 KIF14Q15058 1648 aa12.22□□□□□ -0.45
RAF1-206ENST00000460610 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
RAF1-206ENST00000460610 REREQ9P2R6 1566 aa12.21□□□□□ -0.46
RAF1-206ENST00000460610 EFCAB2Q5VUJ9 269 aa12.2□□□□□ -0.46
RAF1-206ENST00000460610 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
RAF1-206ENST00000460610 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
RAF1-206ENST00000460610 HSPA1LP34931 641 aa12.18□□□□□ -0.46
RAF1-206ENST00000460610 AGLP35573 1532 aa12.17□□□□□ -0.46
RAF1-206ENST00000460610 KIDINS220Q9ULH0 1771 aa12.16□□□□□ -0.46
RAF1-206ENST00000460610 SUPT6HQ7KZ85 1726 aaKnown RBP12.16□□□□□ -0.46
RAF1-206ENST00000460610 MLH3Q9UHC1 1453 aa12.15□□□□□ -0.46
RAF1-206ENST00000460610 LRRIQ1Q96JM4 1722 aa12.15□□□□□ -0.46
RAF1-206ENST00000460610 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
RAF1-206ENST00000460610 MROH2AA6NES4 1674 aa12.14□□□□□ -0.47
RAF1-206ENST00000460610 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
RAF1-206ENST00000460610 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
RAF1-206ENST00000460610 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
RAF1-206ENST00000460610 ITSN2Q9NZM3 1697 aa12.12□□□□□ -0.47
RAF1-206ENST00000460610 NPATQ14207 1427 aa12.11□□□□□ -0.47
RAF1-206ENST00000460610 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
RAF1-206ENST00000460610 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
RAF1-206ENST00000460610 ZMYM3Q14202 1370 aa12.11□□□□□ -0.47
RAF1-206ENST00000460610 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
RAF1-206ENST00000460610 ESF1Q9H501 851 aaKnown RBP12.11□□□□□ -0.47
RAF1-206ENST00000460610 CNTLNQ9NXG0 1405 aa12.11□□□□□ -0.47
RAF1-206ENST00000460610 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
RAF1-206ENST00000460610 ABCC1P33527 1531 aa12.1□□□□□ -0.47
RAF1-206ENST00000460610 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
RAF1-206ENST00000460610 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
RAF1-206ENST00000460610 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
RAF1-206ENST00000460610 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
RAF1-206ENST00000460610 PKD2Q13563 968 aa12.08□□□□□ -0.48
RAF1-206ENST00000460610 TROQ12816 1431 aaPredicted RBP12.08□□□□□ -0.48
RAF1-206ENST00000460610 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
RAF1-206ENST00000460610 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
RAF1-206ENST00000460610 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
RAF1-206ENST00000460610 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
RAF1-206ENST00000460610 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
RAF1-206ENST00000460610 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
RAF1-206ENST00000460610 POLR1AO95602 1720 aaPredicted RBP12.04□□□□□ -0.48
RAF1-206ENST00000460610 RGS17Q9UGC6 210 aaPredicted RBP12.04□□□□□ -0.48
RAF1-206ENST00000460610 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
RAF1-206ENST00000460610 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.48
RAF1-206ENST00000460610 TOM1O60784 492 aa12.02□□□□□ -0.49
RAF1-206ENST00000460610 CDK11AQ9UQ88 783 aaPredicted RBP12.02□□□□□ -0.49
RAF1-206ENST00000460610 STRCP1A6NGW2 1772 aa12.02□□□□□ -0.49
RAF1-206ENST00000460610 CPS1P31327 1500 aa12.01□□□□□ -0.49
RAF1-206ENST00000460610 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
RAF1-206ENST00000460610 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
RAF1-206ENST00000460610 CLIP1P30622 1438 aa12□□□□□ -0.49
RAF1-206ENST00000460610 FMN1Q68DA7 1419 aa12□□□□□ -0.49
RAF1-206ENST00000460610 A2ML1A8K2U0 1454 aa11.99□□□□□ -0.49
RAF1-206ENST00000460610 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
RAF1-206ENST00000460610 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms