RNA–Protein interactions for RNA: ENST00000459787.1

GYPC-204, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 3

Gene GYPC, Length 758 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-204ENST00000459787 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
GYPC-204ENST00000459787 MAGI2Q86UL8 1455 aa22.74■■□□□ 1.23
GYPC-204ENST00000459787 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
GYPC-204ENST00000459787 ZMYM4Q5VZL5 1548 aa22.7■■□□□ 1.22
GYPC-204ENST00000459787 RICTORQ6R327 1708 aa22.69■■□□□ 1.22
GYPC-204ENST00000459787 GPATCH8Q9UKJ3 1502 aaKnown RBP22.69■■□□□ 1.22
GYPC-204ENST00000459787 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
GYPC-204ENST00000459787 ARID4BQ4LE39 1312 aaPredicted RBP22.69■■□□□ 1.22
GYPC-204ENST00000459787 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
GYPC-204ENST00000459787 CFDP1Q9UEE9 299 aaPredicted RBP22.69■■□□□ 1.22
GYPC-204ENST00000459787 ZNF518AQ6AHZ1 1483 aa22.67■■□□□ 1.22
GYPC-204ENST00000459787 ZNF777Q9ULD5 760 aaPredicted RBP22.66■■□□□ 1.22
GYPC-204ENST00000459787 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
GYPC-204ENST00000459787 ZFYVE16Q7Z3T8 1539 aa22.64■■□□□ 1.21
GYPC-204ENST00000459787 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.21
GYPC-204ENST00000459787 ARHGEF40Q8TER5 1519 aa22.64■■□□□ 1.21
GYPC-204ENST00000459787 YEATS2Q9ULM3 1422 aa22.64■■□□□ 1.21
GYPC-204ENST00000459787 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
GYPC-204ENST00000459787 MYT1LQ9UL68 1186 aa22.61■■□□□ 1.21
GYPC-204ENST00000459787 ATP10AO60312 1499 aa22.6■■□□□ 1.21
GYPC-204ENST00000459787 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
GYPC-204ENST00000459787 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
GYPC-204ENST00000459787 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
GYPC-204ENST00000459787 ABCC1P33527 1531 aa22.59■■□□□ 1.21
GYPC-204ENST00000459787 ARHGEF12Q9NZN5 1544 aa22.59■■□□□ 1.21
GYPC-204ENST00000459787 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.2
GYPC-204ENST00000459787 MAP3K1Q13233 1512 aa22.57■■□□□ 1.2
GYPC-204ENST00000459787 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
GYPC-204ENST00000459787 HNRNPMP52272 730 aaKnown RBP eCLIP22.57■■□□□ 1.21e-8■■■■■ 30.5
GYPC-204ENST00000459787 APLP2Q06481 763 aa22.57■■□□□ 1.2
GYPC-204ENST00000459787 KDM5CP41229 1560 aa22.57■■□□□ 1.2
GYPC-204ENST00000459787 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
GYPC-204ENST00000459787 C9orf84Q5VXU9 1444 aa22.55■■□□□ 1.2
GYPC-204ENST00000459787 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
GYPC-204ENST00000459787 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
GYPC-204ENST00000459787 KANK4Q5T7N3 995 aaPredicted RBP22.52■■□□□ 1.2
GYPC-204ENST00000459787 SPAG9O60271 1321 aaKnown RBP22.52■■□□□ 1.2
GYPC-204ENST00000459787 SAMD9LQ8IVG5 1584 aa22.51■■□□□ 1.19
GYPC-204ENST00000459787 ZNF644Q9H582 1327 aaPredicted RBP22.51■■□□□ 1.19
GYPC-204ENST00000459787 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
GYPC-204ENST00000459787 HECW2Q9P2P5 1572 aa22.49■■□□□ 1.19
GYPC-204ENST00000459787 SYCP2Q9BX26 1530 aa22.48■■□□□ 1.19
GYPC-204ENST00000459787 MLECQ14165 292 aa22.48■■□□□ 1.19
GYPC-204ENST00000459787 RSPH4AQ5TD94 716 aa22.48■■□□□ 1.19
GYPC-204ENST00000459787 BCORL1Q5H9F3 1711 aa22.48■■□□□ 1.19
GYPC-204ENST00000459787 PTPRMP28827 1452 aa22.47■■□□□ 1.19
GYPC-204ENST00000459787 ITSN2Q9NZM3 1697 aa22.47■■□□□ 1.19
GYPC-204ENST00000459787 SUPT6HQ7KZ85 1726 aaKnown RBP22.47■■□□□ 1.19
GYPC-204ENST00000459787 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
GYPC-204ENST00000459787 REREQ9P2R6 1566 aa22.42■■□□□ 1.18
GYPC-204ENST00000459787 DIP2CQ9Y2E4 1556 aa22.42■■□□□ 1.18
GYPC-204ENST00000459787 MADDQ8WXG6 1647 aa22.39■■□□□ 1.18
GYPC-204ENST00000459787 AGLP35573 1532 aa22.39■■□□□ 1.17
GYPC-204ENST00000459787 RTEL1-TNFRSF6BF6WH68 1400 aa22.38■■□□□ 1.17
GYPC-204ENST00000459787 MIA2Q96PC5 1412 aa22.38■■□□□ 1.17
GYPC-204ENST00000459787 ABCA6Q8N139 1617 aa22.38■■□□□ 1.17
GYPC-204ENST00000459787 KIDINS220Q9ULH0 1771 aa22.38■■□□□ 1.17
GYPC-204ENST00000459787 SIGLEC1Q9BZZ2 1709 aa22.37■■□□□ 1.17
GYPC-204ENST00000459787 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
GYPC-204ENST00000459787 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
GYPC-204ENST00000459787 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
GYPC-204ENST00000459787 MYOM3Q5VTT5 1437 aa22.36■■□□□ 1.17
GYPC-204ENST00000459787 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
GYPC-204ENST00000459787 ESF1Q9H501 851 aaKnown RBP22.35■■□□□ 1.17
GYPC-204ENST00000459787 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
GYPC-204ENST00000459787 A2MP01023 1474 aa22.32■■□□□ 1.16
GYPC-204ENST00000459787 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
GYPC-204ENST00000459787 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
GYPC-204ENST00000459787 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
GYPC-204ENST00000459787 RIMS1Q86UR5 1692 aaKnown RBP22.29■■□□□ 1.16
GYPC-204ENST00000459787 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
GYPC-204ENST00000459787 ARHGEF5Q12774 1597 aa22.27■■□□□ 1.16
GYPC-204ENST00000459787 CNTLNQ9NXG0 1405 aa22.26■■□□□ 1.15
GYPC-204ENST00000459787 CEBPAP49715 358 aaPredicted RBP22.25■■□□□ 1.15
GYPC-204ENST00000459787 PLXNC1O60486 1568 aa22.24■■□□□ 1.15
GYPC-204ENST00000459787 FER1L4A9Z1Z3 1794 aa22.23■■□□□ 1.15
GYPC-204ENST00000459787 GGT6Q6P531 493 aa22.23■■□□□ 1.15
GYPC-204ENST00000459787 FGD6Q6ZV73 1430 aa22.21■■□□□ 1.15
GYPC-204ENST00000459787 KIF3BO15066 747 aa22.19■■□□□ 1.14
GYPC-204ENST00000459787 LMTK3Q96Q04 1460 aa22.19■■□□□ 1.14
GYPC-204ENST00000459787 ADGBQ8N7X0 1667 aa22.18■■□□□ 1.14
GYPC-204ENST00000459787 ZMYM3Q14202 1370 aa22.17■■□□□ 1.14
GYPC-204ENST00000459787 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
GYPC-204ENST00000459787 ABCC5O15440 1437 aa22.14■■□□□ 1.14
GYPC-204ENST00000459787 MAST1Q9Y2H9 1570 aa22.14■■□□□ 1.13
GYPC-204ENST00000459787 PTPN23Q9H3S7 1636 aa22.13■■□□□ 1.13
GYPC-204ENST00000459787 HSPA2P54652 639 aa22.11■■□□□ 1.13
GYPC-204ENST00000459787 NPATQ14207 1427 aa22.11■■□□□ 1.13
GYPC-204ENST00000459787 SHANK2Q9UPX8 1470 aa22.1■■□□□ 1.13
GYPC-204ENST00000459787 WASHC2CQ9Y4E1 1318 aa22.09■■□□□ 1.13
GYPC-204ENST00000459787 DAPK1P53355 1430 aa22.09■■□□□ 1.13
GYPC-204ENST00000459787 UHRF1BP1Q6BDS2 1440 aa22.09■■□□□ 1.13
GYPC-204ENST00000459787 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
GYPC-204ENST00000459787 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.13
GYPC-204ENST00000459787 RRP7BPQ9NSQ0 103 aa22.07■■□□□ 1.12
GYPC-204ENST00000459787 KIF15Q9NS87 1388 aa22.07■■□□□ 1.12
GYPC-204ENST00000459787 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
GYPC-204ENST00000459787 FAM135AQ9P2D6 1515 aa22.05■■□□□ 1.12
GYPC-204ENST00000459787 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
GYPC-204ENST00000459787 C3P01024 1663 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms