RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 ARHGAP5Q13017 1502 aa28.04■■■□□ 2.08
SCARNA2-201ENST00000458748 ARHGEF40Q8TER5 1519 aa28.04■■■□□ 2.08
SCARNA2-201ENST00000458748 MAGI2Q86UL8 1455 aa28.03■■■□□ 2.08
SCARNA2-201ENST00000458748 ARID4BQ4LE39 1312 aaPredicted RBP28.03■■■□□ 2.08
SCARNA2-201ENST00000458748 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
SCARNA2-201ENST00000458748 CDC42BPBQ9Y5S2 1711 aa28.02■■■□□ 2.08
SCARNA2-201ENST00000458748 ADAMTSL3P82987 1691 aa28.01■■■□□ 2.07
SCARNA2-201ENST00000458748 PREX2Q70Z35 1606 aa28■■■□□ 2.07
SCARNA2-201ENST00000458748 ZFYVE16Q7Z3T8 1539 aa27.97■■■□□ 2.07
SCARNA2-201ENST00000458748 PTPRMP28827 1452 aa27.96■■■□□ 2.07
SCARNA2-201ENST00000458748 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
SCARNA2-201ENST00000458748 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
SCARNA2-201ENST00000458748 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.06
SCARNA2-201ENST00000458748 ZNF518AQ6AHZ1 1483 aa27.94■■■□□ 2.06
SCARNA2-201ENST00000458748 YEATS2Q9ULM3 1422 aa27.92■■■□□ 2.06
SCARNA2-201ENST00000458748 MADDQ8WXG6 1647 aa27.92■■■□□ 2.06
SCARNA2-201ENST00000458748 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
SCARNA2-201ENST00000458748 KDM5CP41229 1560 aa27.89■■■□□ 2.05
SCARNA2-201ENST00000458748 ABCC1P33527 1531 aa27.87■■■□□ 2.05
SCARNA2-201ENST00000458748 GPATCH8Q9UKJ3 1502 aaKnown RBP27.85■■■□□ 2.05
SCARNA2-201ENST00000458748 ATP10AO60312 1499 aa27.84■■■□□ 2.05
SCARNA2-201ENST00000458748 AFAP1Q8N556 730 aa27.84■■■□□ 2.05
SCARNA2-201ENST00000458748 ITSN2Q9NZM3 1697 aa27.84■■■□□ 2.05
SCARNA2-201ENST00000458748 EHBP1L1Q8N3D4 1523 aa27.83■■■□□ 2.05
SCARNA2-201ENST00000458748 SIGLEC1Q9BZZ2 1709 aa27.83■■■□□ 2.05
SCARNA2-201ENST00000458748 RIMS1Q86UR5 1692 aaKnown RBP27.81■■■□□ 2.04
SCARNA2-201ENST00000458748 CCNB3Q8WWL7 1395 aa27.81■■■□□ 2.04
SCARNA2-201ENST00000458748 C9orf84Q5VXU9 1444 aa27.81■■■□□ 2.04
SCARNA2-201ENST00000458748 ILDR1Q86SU0 546 aaPredicted RBP27.8■■■□□ 2.04
SCARNA2-201ENST00000458748 MLH3Q9UHC1 1453 aa27.8■■■□□ 2.04
SCARNA2-201ENST00000458748 ARHGEF12Q9NZN5 1544 aa27.8■■■□□ 2.04
SCARNA2-201ENST00000458748 VPS8Q8N3P4 1428 aa27.78■■■□□ 2.04
SCARNA2-201ENST00000458748 MLECQ14165 292 aa27.78■■■□□ 2.04
SCARNA2-201ENST00000458748 SAMD9LQ8IVG5 1584 aa27.77■■■□□ 2.04
SCARNA2-201ENST00000458748 TRAPPC8Q9Y2L5 1435 aa27.77■■■□□ 2.04
SCARNA2-201ENST00000458748 PLPPR3Q6T4P5 718 aa27.76■■■□□ 2.03
SCARNA2-201ENST00000458748 CFDP1Q9UEE9 299 aaPredicted RBP27.76■■■□□ 2.03
SCARNA2-201ENST00000458748 PLEKHH2Q8IVE3 1493 aa27.76■■■□□ 2.03
SCARNA2-201ENST00000458748 MYT1LQ9UL68 1186 aa27.74■■■□□ 2.03
SCARNA2-201ENST00000458748 ZNF777Q9ULD5 760 aaPredicted RBP27.74■■■□□ 2.03
SCARNA2-201ENST00000458748 KIAA1107Q9UPP5 1409 aa27.74■■■□□ 2.03
SCARNA2-201ENST00000458748 REREQ9P2R6 1566 aa27.73■■■□□ 2.03
SCARNA2-201ENST00000458748 TIAM1Q13009 1591 aa27.73■■■□□ 2.03
SCARNA2-201ENST00000458748 DIP2CQ9Y2E4 1556 aa27.73■■■□□ 2.03
SCARNA2-201ENST00000458748 SYCP2Q9BX26 1530 aa27.71■■■□□ 2.03
SCARNA2-201ENST00000458748 ABCA6Q8N139 1617 aa27.7■■■□□ 2.02
SCARNA2-201ENST00000458748 SUPT6HQ7KZ85 1726 aaKnown RBP27.7■■■□□ 2.02
SCARNA2-201ENST00000458748 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
SCARNA2-201ENST00000458748 KIDINS220Q9ULH0 1771 aa27.68■■■□□ 2.02
SCARNA2-201ENST00000458748 FER1L4A9Z1Z3 1794 aa27.67■■■□□ 2.02
SCARNA2-201ENST00000458748 MAP3K1Q13233 1512 aa27.66■■■□□ 2.02
SCARNA2-201ENST00000458748 HNRNPMP52272 730 aaKnown RBP eCLIP27.65■■■□□ 2.02
SCARNA2-201ENST00000458748 NCOA2Q15596 1464 aa27.64■■■□□ 2.01
SCARNA2-201ENST00000458748 AGLP35573 1532 aa27.63■■■□□ 2.01
SCARNA2-201ENST00000458748 SPAG9O60271 1321 aaKnown RBP27.62■■■□□ 2.01
SCARNA2-201ENST00000458748 APLP2Q06481 763 aa27.61■■■□□ 2.01
SCARNA2-201ENST00000458748 LRRC9Q6ZRR7 1453 aa27.61■■■□□ 2.01
SCARNA2-201ENST00000458748 HSPA2P54652 639 aa27.59■■■□□ 2.01
SCARNA2-201ENST00000458748 ATP7AQ04656 1500 aa27.57■■■□□ 2
SCARNA2-201ENST00000458748 INO80Q9ULG1 1556 aaPredicted RBP27.57■■■□□ 2
SCARNA2-201ENST00000458748 ZNF644Q9H582 1327 aaPredicted RBP27.55■■■□□ 2
SCARNA2-201ENST00000458748 MBD5Q9P267 1494 aa27.55■■■□□ 2
SCARNA2-201ENST00000458748 CEBPAP49715 358 aaPredicted RBP27.53■■■□□ 2
SCARNA2-201ENST00000458748 RSPH4AQ5TD94 716 aa27.5■■□□□ 1.99
SCARNA2-201ENST00000458748 CAMSAP2Q08AD1 1489 aa27.49■■□□□ 1.99
SCARNA2-201ENST00000458748 RTEL1-TNFRSF6BF6WH68 1400 aa27.49■■□□□ 1.99
SCARNA2-201ENST00000458748 KANK4Q5T7N3 995 aaPredicted RBP27.48■■□□□ 1.99
SCARNA2-201ENST00000458748 ADGBQ8N7X0 1667 aa27.48■■□□□ 1.99
SCARNA2-201ENST00000458748 A2MP01023 1474 aa27.46■■□□□ 1.99
SCARNA2-201ENST00000458748 PLXNC1O60486 1568 aa27.46■■□□□ 1.99
SCARNA2-201ENST00000458748 CCDC141Q6ZP82 1450 aa27.45■■□□□ 1.99
SCARNA2-201ENST00000458748 ESF1Q9H501 851 aaKnown RBP27.45■■□□□ 1.98
SCARNA2-201ENST00000458748 ARHGEF5Q12774 1597 aa27.43■■□□□ 1.98
SCARNA2-201ENST00000458748 CNTLNQ9NXG0 1405 aa27.42■■□□□ 1.98
SCARNA2-201ENST00000458748 MIA2Q96PC5 1412 aa27.41■■□□□ 1.98
SCARNA2-201ENST00000458748 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
SCARNA2-201ENST00000458748 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
SCARNA2-201ENST00000458748 FBXO41Q8TF61 875 aa27.39■■□□□ 1.98
SCARNA2-201ENST00000458748 MYOM3Q5VTT5 1437 aa27.39■■□□□ 1.97
SCARNA2-201ENST00000458748 C3P01024 1663 aa27.39■■□□□ 1.97
SCARNA2-201ENST00000458748 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
SCARNA2-201ENST00000458748 TSPY4P0CV99 314 aa27.35■■□□□ 1.97
SCARNA2-201ENST00000458748 TSPY10P0CW01 314 aa27.35■■□□□ 1.97
SCARNA2-201ENST00000458748 DHX29Q7Z478 1369 aaKnown RBP27.35■■□□□ 1.97
SCARNA2-201ENST00000458748 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
SCARNA2-201ENST00000458748 UHRF1BP1Q6BDS2 1440 aa27.33■■□□□ 1.96
SCARNA2-201ENST00000458748 MAST1Q9Y2H9 1570 aa27.29■■□□□ 1.96
SCARNA2-201ENST00000458748 GGT6Q6P531 493 aa27.27■■□□□ 1.96
SCARNA2-201ENST00000458748 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
SCARNA2-201ENST00000458748 ZMYM3Q14202 1370 aa27.26■■□□□ 1.95
SCARNA2-201ENST00000458748 NPATQ14207 1427 aa27.25■■□□□ 1.95
SCARNA2-201ENST00000458748 PTPN23Q9H3S7 1636 aa27.22■■□□□ 1.95
SCARNA2-201ENST00000458748 FAM135AQ9P2D6 1515 aa27.21■■□□□ 1.95
SCARNA2-201ENST00000458748 STRCQ7RTU9 1775 aa27.21■■□□□ 1.95
SCARNA2-201ENST00000458748 KIF3BO15066 747 aa27.2■■□□□ 1.94
SCARNA2-201ENST00000458748 CERKQ8TCT0 537 aa27.19■■□□□ 1.94
SCARNA2-201ENST00000458748 FGD6Q6ZV73 1430 aa27.18■■□□□ 1.94
SCARNA2-201ENST00000458748 DMRT2Q9Y5R5 561 aa27.16■■□□□ 1.94
SCARNA2-201ENST00000458748 TCOF1Q13428 1488 aaKnown RBP27.16■■□□□ 1.94
SCARNA2-201ENST00000458748 CROCC2H7BZ55 1655 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms