RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 CFDP1Q9UEE9 299 aaPredicted RBP16.85■□□□□ 0.29
TSC22D1-203ENST00000458659 PKD2Q13563 968 aa16.84■□□□□ 0.29
TSC22D1-203ENST00000458659 KIF7Q2M1P5 1343 aa16.83■□□□□ 0.29
TSC22D1-203ENST00000458659 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
TSC22D1-203ENST00000458659 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
TSC22D1-203ENST00000458659 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
TSC22D1-203ENST00000458659 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
TSC22D1-203ENST00000458659 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
TSC22D1-203ENST00000458659 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
TSC22D1-203ENST00000458659 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
TSC22D1-203ENST00000458659 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
TSC22D1-203ENST00000458659 ARID3AQ99856 593 aa16.78■□□□□ 0.28
TSC22D1-203ENST00000458659 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
TSC22D1-203ENST00000458659 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.28
TSC22D1-203ENST00000458659 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
TSC22D1-203ENST00000458659 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
TSC22D1-203ENST00000458659 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
TSC22D1-203ENST00000458659 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
TSC22D1-203ENST00000458659 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
TSC22D1-203ENST00000458659 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
TSC22D1-203ENST00000458659 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
TSC22D1-203ENST00000458659 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
TSC22D1-203ENST00000458659 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
TSC22D1-203ENST00000458659 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
TSC22D1-203ENST00000458659 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
TSC22D1-203ENST00000458659 NBPF8Q3BBV2 869 aa16.71■□□□□ 0.27
TSC22D1-203ENST00000458659 RALBP1Q15311 655 aa16.71■□□□□ 0.26
TSC22D1-203ENST00000458659 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
TSC22D1-203ENST00000458659 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
TSC22D1-203ENST00000458659 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
TSC22D1-203ENST00000458659 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
TSC22D1-203ENST00000458659 USP47Q96K76 1375 aa16.69■□□□□ 0.26
TSC22D1-203ENST00000458659 FGD6Q6ZV73 1430 aa16.68■□□□□ 0.26
TSC22D1-203ENST00000458659 IGF1RP08069 1367 aa16.68■□□□□ 0.26
TSC22D1-203ENST00000458659 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
TSC22D1-203ENST00000458659 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
TSC22D1-203ENST00000458659 FTSJ3Q8IY81 847 aaKnown RBP16.67■□□□□ 0.26
TSC22D1-203ENST00000458659 BACH2Q9BYV9 841 aa16.66■□□□□ 0.26
TSC22D1-203ENST00000458659 ROCK2O75116 1388 aaKnown RBP16.66■□□□□ 0.26
TSC22D1-203ENST00000458659 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
TSC22D1-203ENST00000458659 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
TSC22D1-203ENST00000458659 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
TSC22D1-203ENST00000458659 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
TSC22D1-203ENST00000458659 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
TSC22D1-203ENST00000458659 MS4A1P11836 297 aa16.65■□□□□ 0.26
TSC22D1-203ENST00000458659 GOLGA6L3A6NEY3 463 aa16.64■□□□□ 0.25
TSC22D1-203ENST00000458659 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
TSC22D1-203ENST00000458659 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
TSC22D1-203ENST00000458659 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
TSC22D1-203ENST00000458659 TMF1P82094 1093 aa16.62■□□□□ 0.25
TSC22D1-203ENST00000458659 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
TSC22D1-203ENST00000458659 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
TSC22D1-203ENST00000458659 ZNF644Q9H582 1327 aaPredicted RBP16.61■□□□□ 0.25
TSC22D1-203ENST00000458659 NUP155O75694 1391 aa16.61■□□□□ 0.25
TSC22D1-203ENST00000458659 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
TSC22D1-203ENST00000458659 GOLGA2Q08379 1002 aa16.61■□□□□ 0.25
TSC22D1-203ENST00000458659 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
TSC22D1-203ENST00000458659 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
TSC22D1-203ENST00000458659 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
TSC22D1-203ENST00000458659 PANK3Q9H999 370 aa16.59■□□□□ 0.25
TSC22D1-203ENST00000458659 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
TSC22D1-203ENST00000458659 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
TSC22D1-203ENST00000458659 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
TSC22D1-203ENST00000458659 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.24
TSC22D1-203ENST00000458659 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
TSC22D1-203ENST00000458659 COG6Q9Y2V7 657 aa16.57■□□□□ 0.24
TSC22D1-203ENST00000458659 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
TSC22D1-203ENST00000458659 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
TSC22D1-203ENST00000458659 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
TSC22D1-203ENST00000458659 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
TSC22D1-203ENST00000458659 TIAM1Q13009 1591 aa16.54■□□□□ 0.24
TSC22D1-203ENST00000458659 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
TSC22D1-203ENST00000458659 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.23
TSC22D1-203ENST00000458659 C20orf194Q5TEA3 1177 aa16.51■□□□□ 0.23
TSC22D1-203ENST00000458659 MYOM3Q5VTT5 1437 aa16.51■□□□□ 0.23
TSC22D1-203ENST00000458659 MSNP26038 577 aaKnown RBP16.5■□□□□ 0.23
TSC22D1-203ENST00000458659 APAF1O14727 1248 aa16.5■□□□□ 0.23
TSC22D1-203ENST00000458659 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
TSC22D1-203ENST00000458659 CFTRP13569 1480 aa16.5■□□□□ 0.23
TSC22D1-203ENST00000458659 POGKQ9P215 609 aa16.49■□□□□ 0.23
TSC22D1-203ENST00000458659 PLCB2Q00722 1185 aa16.49■□□□□ 0.23
TSC22D1-203ENST00000458659 NCOA2Q15596 1464 aa16.49■□□□□ 0.23
TSC22D1-203ENST00000458659 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
TSC22D1-203ENST00000458659 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
TSC22D1-203ENST00000458659 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
TSC22D1-203ENST00000458659 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
TSC22D1-203ENST00000458659 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
TSC22D1-203ENST00000458659 NAIPQ13075 1403 aa16.46■□□□□ 0.22
TSC22D1-203ENST00000458659 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.224e-6■■□□□ 13.5
TSC22D1-203ENST00000458659 ITPRIPQ8IWB1 547 aa16.45■□□□□ 0.22
TSC22D1-203ENST00000458659 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
TSC22D1-203ENST00000458659 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
TSC22D1-203ENST00000458659 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
TSC22D1-203ENST00000458659 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
TSC22D1-203ENST00000458659 APBB1O00213 710 aa16.43■□□□□ 0.22
TSC22D1-203ENST00000458659 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
TSC22D1-203ENST00000458659 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
TSC22D1-203ENST00000458659 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
TSC22D1-203ENST00000458659 MORC1Q86VD1 984 aa16.42■□□□□ 0.22
TSC22D1-203ENST00000458659 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms