RNA–Protein interactions for RNA: ENST00000457811.1

RAD23B-205, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-205ENST00000457811 NBR1Q14596 966 aa12.48□□□□□ -0.41
RAD23B-205ENST00000457811 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
RAD23B-205ENST00000457811 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
RAD23B-205ENST00000457811 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
RAD23B-205ENST00000457811 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
RAD23B-205ENST00000457811 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
RAD23B-205ENST00000457811 E2F4Q16254 413 aa12.44□□□□□ -0.42
RAD23B-205ENST00000457811 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
RAD23B-205ENST00000457811 MFSD10Q14728 455 aa12.42□□□□□ -0.42
RAD23B-205ENST00000457811 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.42
RAD23B-205ENST00000457811 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
RAD23B-205ENST00000457811 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
RAD23B-205ENST00000457811 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
RAD23B-205ENST00000457811 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
RAD23B-205ENST00000457811 FOXK1P85037 733 aa12.33□□□□□ -0.44
RAD23B-205ENST00000457811 DSG2Q14126 1118 aa12.33□□□□□ -0.44
RAD23B-205ENST00000457811 KIF3CO14782 793 aa12.3□□□□□ -0.44
RAD23B-205ENST00000457811 PLPP6Q8IY26 295 aa12.3□□□□□ -0.44
RAD23B-205ENST00000457811 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.3□□□□□ -0.44
RAD23B-205ENST00000457811 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
RAD23B-205ENST00000457811 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
RAD23B-205ENST00000457811 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
RAD23B-205ENST00000457811 TULP1O00294 542 aaPredicted RBP12.2□□□□□ -0.46
RAD23B-205ENST00000457811 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
RAD23B-205ENST00000457811 DPYSL4O14531 572 aa12.18□□□□□ -0.46
RAD23B-205ENST00000457811 MAMSTRQ6ZN01 415 aa12.18□□□□□ -0.46
RAD23B-205ENST00000457811 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
RAD23B-205ENST00000457811 MAP3K9P80192 1104 aa12.17□□□□□ -0.46
RAD23B-205ENST00000457811 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
RAD23B-205ENST00000457811 SEMA3EO15041 775 aa12.16□□□□□ -0.46
RAD23B-205ENST00000457811 UPF1Q92900 1129 aaKnown RBP eCLIP12.16□□□□□ -0.466e-17■□□□□ 10.1
RAD23B-205ENST00000457811 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
RAD23B-205ENST00000457811 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
RAD23B-205ENST00000457811 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
RAD23B-205ENST00000457811 SMYD5Q6GMV2 418 aa12.13□□□□□ -0.47
RAD23B-205ENST00000457811 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
RAD23B-205ENST00000457811 TBC1D12O60347 775 aa12.12□□□□□ -0.47
RAD23B-205ENST00000457811 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
RAD23B-205ENST00000457811 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
RAD23B-205ENST00000457811 PDIA6Q15084 440 aa12.08□□□□□ -0.48
RAD23B-205ENST00000457811 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
RAD23B-205ENST00000457811 LMOD2Q6P5Q4 547 aa12.07□□□□□ -0.48
RAD23B-205ENST00000457811 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAD23B-205ENST00000457811 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
RAD23B-205ENST00000457811 SLC34A2O95436 690 aa12.06□□□□□ -0.48
RAD23B-205ENST00000457811 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
RAD23B-205ENST00000457811 EVI5O60447 810 aa12.03□□□□□ -0.48
RAD23B-205ENST00000457811 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
RAD23B-205ENST00000457811 MLLT3P42568 568 aaPredicted RBP12.02□□□□□ -0.49
RAD23B-205ENST00000457811 DOK7Q18PE1 504 aa12.02□□□□□ -0.49
RAD23B-205ENST00000457811 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
RAD23B-205ENST00000457811 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
RAD23B-205ENST00000457811 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
RAD23B-205ENST00000457811 LHX8Q68G74 356 aa11.98□□□□□ -0.49
RAD23B-205ENST00000457811 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
RAD23B-205ENST00000457811 SNPHO15079 494 aa11.96□□□□□ -0.49
RAD23B-205ENST00000457811 DDX12PQ92771 950 aa11.95□□□□□ -0.5
RAD23B-205ENST00000457811 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
RAD23B-205ENST00000457811 PTGER2P43116 358 aa11.94□□□□□ -0.5
RAD23B-205ENST00000457811 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
RAD23B-205ENST00000457811 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
RAD23B-205ENST00000457811 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
RAD23B-205ENST00000457811 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
RAD23B-205ENST00000457811 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
RAD23B-205ENST00000457811 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
RAD23B-205ENST00000457811 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
RAD23B-205ENST00000457811 NUDT7P0C024 238 aa11.88□□□□□ -0.51
RAD23B-205ENST00000457811 OSBPP22059 807 aa11.87□□□□□ -0.51
RAD23B-205ENST00000457811 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■■□□□ 14.2
RAD23B-205ENST00000457811 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
RAD23B-205ENST00000457811 PHF14O94880 888 aa11.86□□□□□ -0.51
RAD23B-205ENST00000457811 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
RAD23B-205ENST00000457811 EPAS1Q99814 870 aa11.85□□□□□ -0.51
RAD23B-205ENST00000457811 KDM4FA0A1W2PPD8 638 aa11.82□□□□□ -0.52
RAD23B-205ENST00000457811 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
RAD23B-205ENST00000457811 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
RAD23B-205ENST00000457811 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
RAD23B-205ENST00000457811 MAP3K7O43318 606 aa11.79□□□□□ -0.52
RAD23B-205ENST00000457811 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
RAD23B-205ENST00000457811 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
RAD23B-205ENST00000457811 ZMYND10O75800 440 aa11.78□□□□□ -0.52
RAD23B-205ENST00000457811 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
RAD23B-205ENST00000457811 FOSBP53539 338 aa11.78□□□□□ -0.52
RAD23B-205ENST00000457811 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
RAD23B-205ENST00000457811 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
RAD23B-205ENST00000457811 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
RAD23B-205ENST00000457811 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
RAD23B-205ENST00000457811 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
RAD23B-205ENST00000457811 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
RAD23B-205ENST00000457811 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
RAD23B-205ENST00000457811 FCHSD2O94868 740 aa11.75□□□□□ -0.53
RAD23B-205ENST00000457811 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
RAD23B-205ENST00000457811 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
RAD23B-205ENST00000457811 SLC24A3Q9HC58 644 aa11.73□□□□□ -0.53
RAD23B-205ENST00000457811 HIC1Q14526 733 aa11.71□□□□□ -0.53
RAD23B-205ENST00000457811 GNPATO15228 680 aa11.7□□□□□ -0.54
RAD23B-205ENST00000457811 GPR37O15354 613 aa11.69□□□□□ -0.54
RAD23B-205ENST00000457811 PTGDRQ13258 359 aa11.69□□□□□ -0.54
RAD23B-205ENST00000457811 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
RAD23B-205ENST00000457811 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms