RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 NAP1L5Q96NT1 182 aaPredicted RBP18.5■□□□□ 0.55
HIPK3-203ENST00000456517 APBB1O00213 710 aa18.49■□□□□ 0.55
HIPK3-203ENST00000456517 KIAA1211Q6ZU35 1233 aa18.48■□□□□ 0.55
HIPK3-203ENST00000456517 DRC7Q8IY82 874 aa18.48■□□□□ 0.55
HIPK3-203ENST00000456517 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
HIPK3-203ENST00000456517 L1TD1Q5T7N2 865 aaKnown RBP18.46■□□□□ 0.55
HIPK3-203ENST00000456517 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
HIPK3-203ENST00000456517 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
HIPK3-203ENST00000456517 G3V3G9 751 aa18.44■□□□□ 0.54
HIPK3-203ENST00000456517 DCAF8Q5TAQ9 597 aa18.44■□□□□ 0.54
HIPK3-203ENST00000456517 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
HIPK3-203ENST00000456517 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
HIPK3-203ENST00000456517 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
HIPK3-203ENST00000456517 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
HIPK3-203ENST00000456517 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
HIPK3-203ENST00000456517 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
HIPK3-203ENST00000456517 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
HIPK3-203ENST00000456517 PRM3Q9NNZ6 103 aa18.4■□□□□ 0.54
HIPK3-203ENST00000456517 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
HIPK3-203ENST00000456517 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
HIPK3-203ENST00000456517 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
HIPK3-203ENST00000456517 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
HIPK3-203ENST00000456517 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.538e-15■■■■■ 28.3
HIPK3-203ENST00000456517 CHMP4AQ9BY43 222 aa18.36■□□□□ 0.53
HIPK3-203ENST00000456517 SPAG9O60271 1321 aaKnown RBP18.35■□□□□ 0.53
HIPK3-203ENST00000456517 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
HIPK3-203ENST00000456517 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
HIPK3-203ENST00000456517 NOC3LQ8WTT2 800 aaKnown RBP18.34■□□□□ 0.53
HIPK3-203ENST00000456517 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
HIPK3-203ENST00000456517 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
HIPK3-203ENST00000456517 GTF2E1P29083 439 aaPredicted RBP18.32■□□□□ 0.52
HIPK3-203ENST00000456517 RTN4Q9NQC3 1192 aaKnown RBP18.32■□□□□ 0.52
HIPK3-203ENST00000456517 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
HIPK3-203ENST00000456517 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
HIPK3-203ENST00000456517 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
HIPK3-203ENST00000456517 PKD2Q13563 968 aa18.3■□□□□ 0.52
HIPK3-203ENST00000456517 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
HIPK3-203ENST00000456517 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
HIPK3-203ENST00000456517 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
HIPK3-203ENST00000456517 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
HIPK3-203ENST00000456517 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
HIPK3-203ENST00000456517 HDAC5Q9UQL6 1122 aa18.28■□□□□ 0.52
HIPK3-203ENST00000456517 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.52
HIPK3-203ENST00000456517 RASSF8Q8NHQ8 419 aa18.27■□□□□ 0.52
HIPK3-203ENST00000456517 CARMIL2Q6F5E8 1435 aa18.27■□□□□ 0.51
HIPK3-203ENST00000456517 CCDC34Q96HJ3 373 aa18.26■□□□□ 0.51
HIPK3-203ENST00000456517 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
HIPK3-203ENST00000456517 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
HIPK3-203ENST00000456517 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
HIPK3-203ENST00000456517 PDE4CQ08493 712 aa18.25■□□□□ 0.51
HIPK3-203ENST00000456517 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
HIPK3-203ENST00000456517 CUX2O14529 1486 aa18.25■□□□□ 0.51
HIPK3-203ENST00000456517 AMPHP49418 695 aa18.24■□□□□ 0.51
HIPK3-203ENST00000456517 LTV1Q96GA3 475 aaPredicted RBP18.24■□□□□ 0.51
HIPK3-203ENST00000456517 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
HIPK3-203ENST00000456517 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
HIPK3-203ENST00000456517 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
HIPK3-203ENST00000456517 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
HIPK3-203ENST00000456517 FOXD1Q16676 465 aa18.23■□□□□ 0.51
HIPK3-203ENST00000456517 TPM4P67936 248 aa18.22■□□□□ 0.51
HIPK3-203ENST00000456517 TOMM22Q9NS69 142 aa18.22■□□□□ 0.51
HIPK3-203ENST00000456517 GBP4Q96PP9 640 aa18.21■□□□□ 0.51
HIPK3-203ENST00000456517 KIF3BO15066 747 aa18.21■□□□□ 0.51
HIPK3-203ENST00000456517 HMMRO75330 724 aa18.2■□□□□ 0.5
HIPK3-203ENST00000456517 HSPA5P11021 654 aaKnown RBP18.2■□□□□ 0.5
HIPK3-203ENST00000456517 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
HIPK3-203ENST00000456517 MARCH6O60337 910 aa18.2■□□□□ 0.5
HIPK3-203ENST00000456517 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
HIPK3-203ENST00000456517 CREBRFQ8IUR6 639 aa18.19■□□□□ 0.5
HIPK3-203ENST00000456517 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
HIPK3-203ENST00000456517 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
HIPK3-203ENST00000456517 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
HIPK3-203ENST00000456517 NACADO15069 1562 aa18.18■□□□□ 0.5
HIPK3-203ENST00000456517 ARHGAP35Q9NRY4 1499 aa18.18■□□□□ 0.5
HIPK3-203ENST00000456517 NUP155O75694 1391 aa18.18■□□□□ 0.5
HIPK3-203ENST00000456517 MSH5O43196 834 aa18.18■□□□□ 0.5
HIPK3-203ENST00000456517 SYAP1Q96A49 352 aaPredicted RBP18.17■□□□□ 0.5
HIPK3-203ENST00000456517 WASHC2CQ9Y4E1 1318 aa18.17■□□□□ 0.5
HIPK3-203ENST00000456517 PTMSP20962 102 aa18.16■□□□□ 0.5
HIPK3-203ENST00000456517 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
HIPK3-203ENST00000456517 A0A0U1RQG5 324 aaPredicted RBP18.16■□□□□ 0.5
HIPK3-203ENST00000456517 EVA1CP58658 441 aa18.15■□□□□ 0.5
HIPK3-203ENST00000456517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
HIPK3-203ENST00000456517 RCAN3Q9UKA8 241 aa18.14■□□□□ 0.5
HIPK3-203ENST00000456517 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
HIPK3-203ENST00000456517 LMOD3Q0VAK6 560 aa18.13■□□□□ 0.49
HIPK3-203ENST00000456517 PMFBP1Q8TBY8 1022 aa18.13■□□□□ 0.49
HIPK3-203ENST00000456517 RALBP1Q15311 655 aa18.13■□□□□ 0.49
HIPK3-203ENST00000456517 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
HIPK3-203ENST00000456517 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
HIPK3-203ENST00000456517 ANKRD30AQ9BXX3 1397 aa18.11■□□□□ 0.49
HIPK3-203ENST00000456517 MFAP1P55081 439 aaKnown RBP18.11■□□□□ 0.49
HIPK3-203ENST00000456517 SLKQ9H2G2 1235 aaPredicted RBP18.1■□□□□ 0.49
HIPK3-203ENST00000456517 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
HIPK3-203ENST00000456517 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
HIPK3-203ENST00000456517 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
HIPK3-203ENST00000456517 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
HIPK3-203ENST00000456517 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
HIPK3-203ENST00000456517 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
HIPK3-203ENST00000456517 SF3A1Q15459 793 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms