RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 KDM6BO15054 1643 aa29.34■■■□□ 2.29
SBDSP1-205ENST00000456312 COL17A1Q9UMD9 1497 aaPredicted RBP29.33■■■□□ 2.29
SBDSP1-205ENST00000456312 ARHGAP5Q13017 1502 aa29.29■■■□□ 2.28
SBDSP1-205ENST00000456312 PHLDB1Q86UU1 1377 aa29.28■■■□□ 2.28
SBDSP1-205ENST00000456312 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
SBDSP1-205ENST00000456312 APLP2Q06481 763 aa29.26■■■□□ 2.27
SBDSP1-205ENST00000456312 FRMPD1Q5SYB0 1578 aa29.26■■■□□ 2.27
SBDSP1-205ENST00000456312 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.27
SBDSP1-205ENST00000456312 AKNAQ7Z591 1439 aa29.25■■■□□ 2.27
SBDSP1-205ENST00000456312 CCNB3Q8WWL7 1395 aa29.23■■■□□ 2.27
SBDSP1-205ENST00000456312 ABCC1P33527 1531 aa29.22■■■□□ 2.27
SBDSP1-205ENST00000456312 ADGRL1O94910 1474 aa29.18■■■□□ 2.26
SBDSP1-205ENST00000456312 EFCAB2Q5VUJ9 269 aa29.17■■■□□ 2.26
SBDSP1-205ENST00000456312 ARHGEF12Q9NZN5 1544 aa29.16■■■□□ 2.26
SBDSP1-205ENST00000456312 MYOM3Q5VTT5 1437 aa29.15■■■□□ 2.26
SBDSP1-205ENST00000456312 DENND4BO75064 1496 aaPredicted RBP29.11■■■□□ 2.25
SBDSP1-205ENST00000456312 ZMYM4Q5VZL5 1548 aa29.11■■■□□ 2.25
SBDSP1-205ENST00000456312 POGZQ7Z3K3 1410 aa29.11■■■□□ 2.25
SBDSP1-205ENST00000456312 SCAPERQ9BY12 1400 aa29.11■■■□□ 2.25
SBDSP1-205ENST00000456312 KDM5CP41229 1560 aa29.1■■■□□ 2.25
SBDSP1-205ENST00000456312 MIA2Q96PC5 1412 aa29.1■■■□□ 2.25
SBDSP1-205ENST00000456312 SYCP2Q9BX26 1530 aa29.1■■■□□ 2.25
SBDSP1-205ENST00000456312 CFDP1Q9UEE9 299 aaPredicted RBP29.09■■■□□ 2.25
SBDSP1-205ENST00000456312 KIAA1107Q9UPP5 1409 aa29.08■■■□□ 2.25
SBDSP1-205ENST00000456312 CAMSAP2Q08AD1 1489 aa29.08■■■□□ 2.25
SBDSP1-205ENST00000456312 PLEKHH2Q8IVE3 1493 aa29.07■■■□□ 2.24
SBDSP1-205ENST00000456312 PTPN23Q9H3S7 1636 aa29.05■■■□□ 2.24
SBDSP1-205ENST00000456312 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
SBDSP1-205ENST00000456312 ZNF518AQ6AHZ1 1483 aa29.03■■■□□ 2.24
SBDSP1-205ENST00000456312 FGD6Q6ZV73 1430 aa29.03■■■□□ 2.24
SBDSP1-205ENST00000456312 TRAPPC8Q9Y2L5 1435 aa29.03■■■□□ 2.24
SBDSP1-205ENST00000456312 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
SBDSP1-205ENST00000456312 RAPGEF3O95398 923 aa29.02■■■□□ 2.24
SBDSP1-205ENST00000456312 TCOF1Q13428 1488 aaKnown RBP29.02■■■□□ 2.24
SBDSP1-205ENST00000456312 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.23
SBDSP1-205ENST00000456312 HECW2Q9P2P5 1572 aa28.98■■■□□ 2.23
SBDSP1-205ENST00000456312 KIDINS220Q9ULH0 1771 aa28.98■■■□□ 2.23
SBDSP1-205ENST00000456312 ZNF777Q9ULD5 760 aaPredicted RBP28.97■■■□□ 2.23
SBDSP1-205ENST00000456312 ARHGEF40Q8TER5 1519 aa28.96■■■□□ 2.23
SBDSP1-205ENST00000456312 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.22
SBDSP1-205ENST00000456312 INO80Q9ULG1 1556 aaPredicted RBP28.95■■■□□ 2.22
SBDSP1-205ENST00000456312 CROCC2H7BZ55 1655 aa28.94■■■□□ 2.22
SBDSP1-205ENST00000456312 MAGI2Q86UL8 1455 aa28.94■■■□□ 2.22
SBDSP1-205ENST00000456312 MLH3Q9UHC1 1453 aa28.93■■■□□ 2.22
SBDSP1-205ENST00000456312 HNRNPMP52272 730 aaKnown RBP eCLIP28.91■■■□□ 2.22
SBDSP1-205ENST00000456312 AFAP1Q8N556 730 aa28.91■■■□□ 2.22
SBDSP1-205ENST00000456312 DNMT1P26358 1616 aaKnown RBP28.9■■■□□ 2.22
SBDSP1-205ENST00000456312 ABCA6Q8N139 1617 aa28.9■■■□□ 2.22
SBDSP1-205ENST00000456312 CCDC141Q6ZP82 1450 aa28.9■■■□□ 2.22
SBDSP1-205ENST00000456312 ZFYVE16Q7Z3T8 1539 aa28.89■■■□□ 2.22
SBDSP1-205ENST00000456312 SIGLEC1Q9BZZ2 1709 aa28.89■■■□□ 2.21
SBDSP1-205ENST00000456312 YEATS2Q9ULM3 1422 aa28.88■■■□□ 2.21
SBDSP1-205ENST00000456312 DIP2CQ9Y2E4 1556 aa28.88■■■□□ 2.21
SBDSP1-205ENST00000456312 MAST1Q9Y2H9 1570 aa28.88■■■□□ 2.21
SBDSP1-205ENST00000456312 ATP7AQ04656 1500 aa28.85■■■□□ 2.21
SBDSP1-205ENST00000456312 RRBP1Q9P2E9 1410 aaKnown RBP28.84■■■□□ 2.21
SBDSP1-205ENST00000456312 REREQ9P2R6 1566 aa28.82■■■□□ 2.2
SBDSP1-205ENST00000456312 ADGBQ8N7X0 1667 aa28.82■■■□□ 2.2
SBDSP1-205ENST00000456312 RSPH4AQ5TD94 716 aa28.8■■■□□ 2.2
SBDSP1-205ENST00000456312 SHANK2Q9UPX8 1470 aa28.79■■■□□ 2.2
SBDSP1-205ENST00000456312 RTEL1-TNFRSF6BF6WH68 1400 aa28.79■■■□□ 2.2
SBDSP1-205ENST00000456312 ABCC5O15440 1437 aa28.79■■■□□ 2.2
SBDSP1-205ENST00000456312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.79■■■□□ 2.2
SBDSP1-205ENST00000456312 DAPK1P53355 1430 aa28.77■■■□□ 2.2
SBDSP1-205ENST00000456312 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
SBDSP1-205ENST00000456312 ATP10AO60312 1499 aa28.75■■■□□ 2.19
SBDSP1-205ENST00000456312 SPAG9O60271 1321 aaKnown RBP28.74■■■□□ 2.19
SBDSP1-205ENST00000456312 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
SBDSP1-205ENST00000456312 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
SBDSP1-205ENST00000456312 PTPRKQ15262 1439 aa28.68■■■□□ 2.18
SBDSP1-205ENST00000456312 AGLP35573 1532 aa28.67■■■□□ 2.18
SBDSP1-205ENST00000456312 ADGRL2O95490 1459 aa28.66■■■□□ 2.18
SBDSP1-205ENST00000456312 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
SBDSP1-205ENST00000456312 FAM50AQ14320 339 aaKnown RBP28.64■■■□□ 2.18
SBDSP1-205ENST00000456312 A2MP01023 1474 aa28.63■■■□□ 2.17
SBDSP1-205ENST00000456312 ADAMTSL3P82987 1691 aa28.61■■■□□ 2.17
SBDSP1-205ENST00000456312 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
SBDSP1-205ENST00000456312 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
SBDSP1-205ENST00000456312 NCOA1Q15788 1441 aa28.57■■■□□ 2.16
SBDSP1-205ENST00000456312 EIF2AK4Q9P2K8 1649 aaKnown RBP28.57■■■□□ 2.16
SBDSP1-205ENST00000456312 DUOX2Q9NRD8 1548 aa28.55■■■□□ 2.16
SBDSP1-205ENST00000456312 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
SBDSP1-205ENST00000456312 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
SBDSP1-205ENST00000456312 ROCK1Q13464 1354 aa28.51■■■□□ 2.16
SBDSP1-205ENST00000456312 RNF17Q9BXT8 1623 aaKnown RBP28.51■■■□□ 2.15
SBDSP1-205ENST00000456312 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
SBDSP1-205ENST00000456312 FER1L4A9Z1Z3 1794 aa28.5■■■□□ 2.15
SBDSP1-205ENST00000456312 ANKRD30AQ9BXX3 1397 aa28.5■■■□□ 2.15
SBDSP1-205ENST00000456312 MADDQ8WXG6 1647 aa28.49■■■□□ 2.15
SBDSP1-205ENST00000456312 MROH1Q8NDA8 1641 aa28.47■■■□□ 2.15
SBDSP1-205ENST00000456312 CHIC2Q9UKJ5 165 aa28.47■■■□□ 2.15
SBDSP1-205ENST00000456312 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
SBDSP1-205ENST00000456312 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
SBDSP1-205ENST00000456312 ERBINQ96RT1 1412 aa28.46■■■□□ 2.15
SBDSP1-205ENST00000456312 KDM4FA0A1W2PPD8 638 aa28.45■■■□□ 2.14
SBDSP1-205ENST00000456312 RIMS1Q86UR5 1692 aaKnown RBP28.42■■■□□ 2.14
SBDSP1-205ENST00000456312 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
SBDSP1-205ENST00000456312 ARID4BQ4LE39 1312 aaPredicted RBP28.41■■■□□ 2.14
SBDSP1-205ENST00000456312 PRDM15P57071 1507 aaPredicted RBP28.38■■■□□ 2.13
SBDSP1-205ENST00000456312 ITGAEP38570 1179 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms