RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 KCNH8Q96L42 1107 aa25.54■■□□□ 1.68
LINC00963-208ENST00000454968 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
LINC00963-208ENST00000454968 KIF13AQ9H1H9 1805 aa25.49■■□□□ 1.67
LINC00963-208ENST00000454968 SAMD9LQ8IVG5 1584 aa25.45■■□□□ 1.67
LINC00963-208ENST00000454968 CFDP1Q9UEE9 299 aaPredicted RBP25.45■■□□□ 1.66
LINC00963-208ENST00000454968 CAMSAP2Q08AD1 1489 aa25.45■■□□□ 1.66
LINC00963-208ENST00000454968 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
LINC00963-208ENST00000454968 CD109Q6YHK3 1445 aa25.42■■□□□ 1.66
LINC00963-208ENST00000454968 DNMT1P26358 1616 aaKnown RBP25.39■■□□□ 1.66
LINC00963-208ENST00000454968 KIAA1107Q9UPP5 1409 aa25.39■■□□□ 1.65
LINC00963-208ENST00000454968 ARHGEF5Q12774 1597 aa25.38■■□□□ 1.65
LINC00963-208ENST00000454968 CFAP74Q9C0B2 1584 aa25.38■■□□□ 1.65
LINC00963-208ENST00000454968 PPRC1Q5VV67 1664 aaKnown RBP25.38■■□□□ 1.65
LINC00963-208ENST00000454968 PLEKHH2Q8IVE3 1493 aa25.38■■□□□ 1.65
LINC00963-208ENST00000454968 FANCAO15360 1455 aa25.37■■□□□ 1.65
LINC00963-208ENST00000454968 MBD5Q9P267 1494 aa25.37■■□□□ 1.65
LINC00963-208ENST00000454968 ABCC1P33527 1531 aa25.37■■□□□ 1.65
LINC00963-208ENST00000454968 ZNF644Q9H582 1327 aaPredicted RBP25.36■■□□□ 1.65
LINC00963-208ENST00000454968 EFCAB2Q5VUJ9 269 aa25.36■■□□□ 1.65
LINC00963-208ENST00000454968 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
LINC00963-208ENST00000454968 CROCC2H7BZ55 1655 aa25.34■■□□□ 1.65
LINC00963-208ENST00000454968 FAM69CQ0P6D2 419 aa25.33■■□□□ 1.65
LINC00963-208ENST00000454968 FAM50AQ14320 339 aaKnown RBP25.33■■□□□ 1.65
LINC00963-208ENST00000454968 NEO1Q92859 1461 aa25.33■■□□□ 1.65
LINC00963-208ENST00000454968 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
LINC00963-208ENST00000454968 ABCC5O15440 1437 aa25.31■■□□□ 1.64
LINC00963-208ENST00000454968 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
LINC00963-208ENST00000454968 SYCP2Q9BX26 1530 aa25.3■■□□□ 1.64
LINC00963-208ENST00000454968 DAPK1P53355 1430 aa25.3■■□□□ 1.64
LINC00963-208ENST00000454968 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
LINC00963-208ENST00000454968 AKNAQ7Z591 1439 aa25.27■■□□□ 1.64
LINC00963-208ENST00000454968 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
LINC00963-208ENST00000454968 ZNF777Q9ULD5 760 aaPredicted RBP25.26■■□□□ 1.63
LINC00963-208ENST00000454968 CCDC141Q6ZP82 1450 aa25.25■■□□□ 1.63
LINC00963-208ENST00000454968 TEX14Q8IWB6 1497 aa25.24■■□□□ 1.63
LINC00963-208ENST00000454968 MAST1Q9Y2H9 1570 aa25.24■■□□□ 1.63
LINC00963-208ENST00000454968 TSPOAP1O95153 1857 aa25.24■■□□□ 1.63
LINC00963-208ENST00000454968 ADGRL1O94910 1474 aa25.24■■□□□ 1.63
LINC00963-208ENST00000454968 ADGRL2O95490 1459 aa25.22■■□□□ 1.63
LINC00963-208ENST00000454968 ADGBQ8N7X0 1667 aa25.21■■□□□ 1.63
LINC00963-208ENST00000454968 ROCK1Q13464 1354 aa25.2■■□□□ 1.62
LINC00963-208ENST00000454968 HNRNPMP52272 730 aaKnown RBP eCLIP25.19■■□□□ 1.62
LINC00963-208ENST00000454968 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
LINC00963-208ENST00000454968 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
LINC00963-208ENST00000454968 KDM5CP41229 1560 aa25.17■■□□□ 1.62
LINC00963-208ENST00000454968 RICTORQ6R327 1708 aa25.16■■□□□ 1.62
LINC00963-208ENST00000454968 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
LINC00963-208ENST00000454968 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
LINC00963-208ENST00000454968 POGZQ7Z3K3 1410 aa25.15■■□□□ 1.62
LINC00963-208ENST00000454968 GCC2Q8IWJ2 1684 aa25.15■■□□□ 1.62
LINC00963-208ENST00000454968 ZNF518AQ6AHZ1 1483 aa25.14■■□□□ 1.61
LINC00963-208ENST00000454968 PLXNC1O60486 1568 aa25.13■■□□□ 1.61
LINC00963-208ENST00000454968 INO80Q9ULG1 1556 aaPredicted RBP25.13■■□□□ 1.61
LINC00963-208ENST00000454968 ITGAEP38570 1179 aa25.12■■□□□ 1.61
LINC00963-208ENST00000454968 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
LINC00963-208ENST00000454968 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
LINC00963-208ENST00000454968 NAIPQ13075 1403 aa25.11■■□□□ 1.61
LINC00963-208ENST00000454968 DENND4BO75064 1496 aaPredicted RBP25.11■■□□□ 1.61
LINC00963-208ENST00000454968 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
LINC00963-208ENST00000454968 FRMPD1Q5SYB0 1578 aa25.1■■□□□ 1.61
LINC00963-208ENST00000454968 TSPY4P0CV99 314 aa25.08■■□□□ 1.61
LINC00963-208ENST00000454968 TSPY10P0CW01 314 aa25.08■■□□□ 1.61
LINC00963-208ENST00000454968 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
LINC00963-208ENST00000454968 MLH3Q9UHC1 1453 aa25.07■■□□□ 1.6
LINC00963-208ENST00000454968 KIDINS220Q9ULH0 1771 aa25.07■■□□□ 1.6
LINC00963-208ENST00000454968 SETD5Q9C0A6 1442 aa25.06■■□□□ 1.6
LINC00963-208ENST00000454968 ANKRD30AQ9BXX3 1397 aa25.06■■□□□ 1.6
LINC00963-208ENST00000454968 AFAP1Q8N556 730 aa25.05■■□□□ 1.6
LINC00963-208ENST00000454968 ATP7AQ04656 1500 aa25.05■■□□□ 1.6
LINC00963-208ENST00000454968 HRCP23327 699 aa25.03■■□□□ 1.6
LINC00963-208ENST00000454968 HECW2Q9P2P5 1572 aa25.03■■□□□ 1.6
LINC00963-208ENST00000454968 CHIC2Q9UKJ5 165 aa25.03■■□□□ 1.6
LINC00963-208ENST00000454968 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
LINC00963-208ENST00000454968 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
LINC00963-208ENST00000454968 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
LINC00963-208ENST00000454968 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
LINC00963-208ENST00000454968 KIF15Q9NS87 1388 aa24.97■■□□□ 1.59
LINC00963-208ENST00000454968 KDM6BO15054 1643 aa24.97■■□□□ 1.59
LINC00963-208ENST00000454968 MAGI2Q86UL8 1455 aa24.97■■□□□ 1.59
LINC00963-208ENST00000454968 RRP7BPQ9NSQ0 103 aa24.96■■□□□ 1.59
LINC00963-208ENST00000454968 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
LINC00963-208ENST00000454968 RAPGEF3O95398 923 aa24.95■■□□□ 1.59
LINC00963-208ENST00000454968 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
LINC00963-208ENST00000454968 ANKRD50Q9ULJ7 1429 aa24.93■■□□□ 1.58
LINC00963-208ENST00000454968 ERBINQ96RT1 1412 aa24.91■■□□□ 1.58
LINC00963-208ENST00000454968 DIP2CQ9Y2E4 1556 aa24.91■■□□□ 1.58
LINC00963-208ENST00000454968 ACIN1Q9UKV3 1341 aaKnown RBP24.89■■□□□ 1.58
LINC00963-208ENST00000454968 EIF2AK4Q9P2K8 1649 aaKnown RBP24.89■■□□□ 1.57
LINC00963-208ENST00000454968 BCORL1Q5H9F3 1711 aa24.89■■□□□ 1.57
LINC00963-208ENST00000454968 REREQ9P2R6 1566 aa24.87■■□□□ 1.57
LINC00963-208ENST00000454968 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
LINC00963-208ENST00000454968 YEATS2Q9ULM3 1422 aa24.84■■□□□ 1.57
LINC00963-208ENST00000454968 UNC13BO14795 1591 aa24.84■■□□□ 1.57
LINC00963-208ENST00000454968 ARHGEF40Q8TER5 1519 aa24.84■■□□□ 1.57
LINC00963-208ENST00000454968 A2MP01023 1474 aa24.83■■□□□ 1.57
LINC00963-208ENST00000454968 DEPDC5O75140 1603 aa24.83■■□□□ 1.57
LINC00963-208ENST00000454968 KDM5DQ9BY66 1539 aa24.82■■□□□ 1.56
LINC00963-208ENST00000454968 RNF17Q9BXT8 1623 aaKnown RBP24.78■■□□□ 1.56
LINC00963-208ENST00000454968 ATP10AO60312 1499 aa24.78■■□□□ 1.56
LINC00963-208ENST00000454968 DHX57Q6P158 1386 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms