RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 MLECQ14165 292 aa42.76■■■■■ 4.44
NEK6-211ENST00000454453 FER1L4A9Z1Z3 1794 aa42.75■■■■■ 4.43
NEK6-211ENST00000454453 ARHGEF12Q9NZN5 1544 aa42.67■■■■■ 4.42
NEK6-211ENST00000454453 ATP10AO60312 1499 aa42.66■■■■■ 4.42
NEK6-211ENST00000454453 MYO5CQ9NQX4 1742 aa42.64■■■■■ 4.42
NEK6-211ENST00000454453 KIF14Q15058 1648 aa42.63■■■■■ 4.41
NEK6-211ENST00000454453 C9orf84Q5VXU9 1444 aa42.62■■■■■ 4.41
NEK6-211ENST00000454453 ARHGAP35Q9NRY4 1499 aa42.62■■■■■ 4.41
NEK6-211ENST00000454453 EFCAB2Q5VUJ9 269 aa42.59■■■■■ 4.41
NEK6-211ENST00000454453 EHMT2Q96KQ7 1210 aa42.59■■■■■ 4.41
NEK6-211ENST00000454453 ATP1B4Q9UN42 357 aaPredicted RBP42.59■■■■■ 4.41
NEK6-211ENST00000454453 FMN1Q68DA7 1419 aa42.59■■■■■ 4.41
NEK6-211ENST00000454453 CERKQ8TCT0 537 aa42.54■■■■■ 4.4
NEK6-211ENST00000454453 UBTFP17480 764 aaKnown RBP42.51■■■■■ 4.4
NEK6-211ENST00000454453 CEBPAP49715 358 aaPredicted RBP42.51■■■■■ 4.4
NEK6-211ENST00000454453 PREX1Q8TCU6 1659 aa42.5■■■■■ 4.39
NEK6-211ENST00000454453 KDM5CP41229 1560 aa42.49■■■■■ 4.39
NEK6-211ENST00000454453 ZNF518AQ6AHZ1 1483 aa42.49■■■■■ 4.39
NEK6-211ENST00000454453 TROQ12816 1431 aaPredicted RBP42.48■■■■■ 4.39
NEK6-211ENST00000454453 LRRIQ1Q96JM4 1722 aa42.47■■■■■ 4.39
NEK6-211ENST00000454453 AFAP1Q8N556 730 aa42.46■■■■■ 4.39
NEK6-211ENST00000454453 CDK11AQ9UQ88 783 aaPredicted RBP42.46■■■■■ 4.39
NEK6-211ENST00000454453 ARHGAP5Q13017 1502 aa42.45■■■■■ 4.39
NEK6-211ENST00000454453 DIP2CQ9Y2E4 1556 aa42.4■■■■■ 4.38
NEK6-211ENST00000454453 STRCQ7RTU9 1775 aa42.37■■■■■ 4.37
NEK6-211ENST00000454453 CDC42BPBQ9Y5S2 1711 aa42.36■■■■■ 4.37
NEK6-211ENST00000454453 CLIP1P30622 1438 aa42.33■■■■■ 4.37
NEK6-211ENST00000454453 REREQ9P2R6 1566 aa42.33■■■■■ 4.37
NEK6-211ENST00000454453 ABCA6Q8N139 1617 aa42.32■■■■■ 4.37
NEK6-211ENST00000454453 MLH3Q9UHC1 1453 aa42.28■■■■■ 4.36
NEK6-211ENST00000454453 UHRF1BP1Q6BDS2 1440 aa42.27■■■■■ 4.36
NEK6-211ENST00000454453 TRAPPC8Q9Y2L5 1435 aa42.25■■■■■ 4.35
NEK6-211ENST00000454453 MYT1LQ9UL68 1186 aa42.24■■■■■ 4.35
NEK6-211ENST00000454453 PREX2Q70Z35 1606 aa42.24■■■■■ 4.35
NEK6-211ENST00000454453 ABCC1P33527 1531 aa42.23■■■■■ 4.35
NEK6-211ENST00000454453 C3P01024 1663 aa42.22■■■■■ 4.35
NEK6-211ENST00000454453 SETD1BQ9UPS6 1966 aaKnown RBP42.19■■■■■ 4.34
NEK6-211ENST00000454453 AGLP35573 1532 aa42.19■■■■■ 4.34
NEK6-211ENST00000454453 ITSN2Q9NZM3 1697 aa42.18■■■■■ 4.34
NEK6-211ENST00000454453 DMRT2Q9Y5R5 561 aa42.17■■■■■ 4.34
NEK6-211ENST00000454453 CHIC1Q5VXU3 224 aa42.14■■■■■ 4.34
NEK6-211ENST00000454453 CASKIN1Q8WXD9 1431 aa42.12■■■■■ 4.33
NEK6-211ENST00000454453 KIDINS220Q9ULH0 1771 aa42.12■■■■■ 4.33
NEK6-211ENST00000454453 CCDC18Q5T9S5 1454 aa42.09■■■■■ 4.33
NEK6-211ENST00000454453 CDC42BPAQ5VT25 1732 aa42.09■■■■■ 4.33
NEK6-211ENST00000454453 PTPRTO14522 1441 aa42.07■■■■■ 4.33
NEK6-211ENST00000454453 SAMD9LQ8IVG5 1584 aa41.98■■■■■ 4.31
NEK6-211ENST00000454453 ESF1Q9H501 851 aaKnown RBP41.98■■■■■ 4.31
NEK6-211ENST00000454453 LTBP4Q8N2S1 1624 aa41.97■■■■■ 4.31
NEK6-211ENST00000454453 CNTLNQ9NXG0 1405 aa41.95■■■■■ 4.31
NEK6-211ENST00000454453 NCOA1Q15788 1441 aa41.94■■■■■ 4.3
NEK6-211ENST00000454453 ILDR2Q71H61 639 aa41.93■■■■■ 4.3
NEK6-211ENST00000454453 DISP3Q9P2K9 1392 aa41.91■■■■■ 4.3
NEK6-211ENST00000454453 FYCO1Q9BQS8 1478 aa41.9■■■■■ 4.3
NEK6-211ENST00000454453 SYCP2Q9BX26 1530 aa41.9■■■■■ 4.3
NEK6-211ENST00000454453 GPATCH8Q9UKJ3 1502 aaKnown RBP41.88■■■■■ 4.29
NEK6-211ENST00000454453 ZNF777Q9ULD5 760 aaPredicted RBP41.87■■■■■ 4.29
NEK6-211ENST00000454453 MROH2AA6NES4 1674 aa41.87■■■■■ 4.29
NEK6-211ENST00000454453 NPATQ14207 1427 aa41.83■■■■■ 4.29
NEK6-211ENST00000454453 HNRNPMP52272 730 aaKnown RBP eCLIP41.82■■■■■ 4.294e-7■■■■□ 19.9
NEK6-211ENST00000454453 CAMSAP1Q5T5Y3 1602 aa41.82■■■■■ 4.29
NEK6-211ENST00000454453 SUPT6HQ7KZ85 1726 aaKnown RBP41.81■■■■■ 4.28
NEK6-211ENST00000454453 ZMYM3Q14202 1370 aa41.81■■■■■ 4.28
NEK6-211ENST00000454453 SPAG9O60271 1321 aaKnown RBP41.8■■■■■ 4.28
NEK6-211ENST00000454453 ATP7AQ04656 1500 aa41.77■■■■■ 4.28
NEK6-211ENST00000454453 PLXNC1O60486 1568 aa41.76■■■■■ 4.28
NEK6-211ENST00000454453 IQSEC2Q5JU85 1478 aa41.76■■■■■ 4.28
NEK6-211ENST00000454453 INO80Q9ULG1 1556 aaPredicted RBP41.76■■■■■ 4.27
NEK6-211ENST00000454453 CLTCQ00610 1675 aaKnown RBP41.73■■■■■ 4.27
NEK6-211ENST00000454453 KIAA1107Q9UPP5 1409 aa41.72■■■■■ 4.27
NEK6-211ENST00000454453 SPATA31D1Q6ZQQ2 1576 aa41.69■■■■■ 4.26
NEK6-211ENST00000454453 NCKAP5LQ9HCH0 1330 aa41.69■■■■■ 4.26
NEK6-211ENST00000454453 A2MP01023 1474 aa41.68■■■■■ 4.26
NEK6-211ENST00000454453 MYO3AQ8NEV4 1616 aa41.66■■■■■ 4.26
NEK6-211ENST00000454453 SOCS7O14512 581 aa41.66■■■■■ 4.26
NEK6-211ENST00000454453 ZNF142P52746 1687 aaPredicted RBP41.65■■■■■ 4.26
NEK6-211ENST00000454453 CFDP1Q9UEE9 299 aaPredicted RBP41.65■■■■■ 4.26
NEK6-211ENST00000454453 PTPRKQ15262 1439 aa41.64■■■■■ 4.26
NEK6-211ENST00000454453 PLEKHH2Q8IVE3 1493 aa41.64■■■■■ 4.26
NEK6-211ENST00000454453 ZNF335Q9H4Z2 1342 aaPredicted RBP41.62■■■■■ 4.25
NEK6-211ENST00000454453 CCNB3Q8WWL7 1395 aa41.61■■■■■ 4.25
NEK6-211ENST00000454453 CEP170BQ9Y4F5 1589 aaPredicted RBP41.59■■■■■ 4.25
NEK6-211ENST00000454453 PLA2R1Q13018 1463 aa41.58■■■■■ 4.25
NEK6-211ENST00000454453 GGT6Q6P531 493 aa41.57■■■■■ 4.25
NEK6-211ENST00000454453 TCOF1Q13428 1488 aaKnown RBP41.56■■■■■ 4.24
NEK6-211ENST00000454453 ZNF644Q9H582 1327 aaPredicted RBP41.53■■■■■ 4.24
NEK6-211ENST00000454453 ADGBQ8N7X0 1667 aa41.52■■■■■ 4.24
NEK6-211ENST00000454453 TIAM1Q13009 1591 aa41.5■■■■■ 4.23
NEK6-211ENST00000454453 PKD2Q13563 968 aa41.5■■■■■ 4.23
NEK6-211ENST00000454453 MTUS2Q5JR59 1369 aa41.5■■■■■ 4.23
NEK6-211ENST00000454453 MBD5Q9P267 1494 aa41.49■■■■■ 4.23
NEK6-211ENST00000454453 PPP6R1Q9UPN7 881 aa41.43■■■■■ 4.22
NEK6-211ENST00000454453 UBAP1LF5GYI3 381 aa41.41■■■■■ 4.22
NEK6-211ENST00000454453 DNMT1P26358 1616 aaKnown RBP41.4■■■■■ 4.22
NEK6-211ENST00000454453 A2ML1A8K2U0 1454 aa41.39■■■■■ 4.22
NEK6-211ENST00000454453 RTEL1-TNFRSF6BF6WH68 1400 aa41.37■■■■■ 4.21
NEK6-211ENST00000454453 EHBP1L1Q8N3D4 1523 aa41.36■■■■■ 4.21
NEK6-211ENST00000454453 DHX29Q7Z478 1369 aaKnown RBP41.35■■■■■ 4.21
NEK6-211ENST00000454453 CEP162Q5TB80 1403 aa41.31■■■■■ 4.2
NEK6-211ENST00000454453 FBXO31Q5XUX0 539 aaPredicted RBP41.27■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms