RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 PLCH2O75038 1416 aa36.48■■■■□ 3.43
HMG20B-206ENST00000453933 CERKQ8TCT0 537 aa36.44■■■■□ 3.42
HMG20B-206ENST00000453933 ATP1B4Q9UN42 357 aaPredicted RBP36.38■■■■□ 3.41
HMG20B-206ENST00000453933 ATP10AO60312 1499 aa36.37■■■■□ 3.41
HMG20B-206ENST00000453933 EFCAB2Q5VUJ9 269 aa36.37■■■■□ 3.41
HMG20B-206ENST00000453933 FER1L4A9Z1Z3 1794 aa36.33■■■■□ 3.41
HMG20B-206ENST00000453933 CEBPAP49715 358 aaPredicted RBP36.33■■■■□ 3.41
HMG20B-206ENST00000453933 ARHGEF12Q9NZN5 1544 aa36.33■■■■□ 3.41
HMG20B-206ENST00000453933 C9orf84Q5VXU9 1444 aa36.31■■■■□ 3.4
HMG20B-206ENST00000453933 EHMT2Q96KQ7 1210 aa36.3■■■■□ 3.4
HMG20B-206ENST00000453933 CDK11AQ9UQ88 783 aaPredicted RBP36.25■■■■□ 3.39
HMG20B-206ENST00000453933 UBTFP17480 764 aaKnown RBP36.24■■■■□ 3.39
HMG20B-206ENST00000453933 AFAP1Q8N556 730 aa36.24■■■■□ 3.39
HMG20B-206ENST00000453933 FMN1Q68DA7 1419 aa36.24■■■■□ 3.39
HMG20B-206ENST00000453933 MYO5CQ9NQX4 1742 aa36.19■■■■□ 3.38
HMG20B-206ENST00000453933 KIF14Q15058 1648 aa36.18■■■■□ 3.38
HMG20B-206ENST00000453933 ZNF518AQ6AHZ1 1483 aa36.18■■■■□ 3.38
HMG20B-206ENST00000453933 ARHGAP35Q9NRY4 1499 aa36.18■■■■□ 3.38
HMG20B-206ENST00000453933 PREX1Q8TCU6 1659 aa36.16■■■■□ 3.38
HMG20B-206ENST00000453933 MYT1LQ9UL68 1186 aa36.15■■■■□ 3.38
HMG20B-206ENST00000453933 TROQ12816 1431 aaPredicted RBP36.14■■■■□ 3.38
HMG20B-206ENST00000453933 DMRT2Q9Y5R5 561 aa36.13■■■■□ 3.37
HMG20B-206ENST00000453933 ARHGAP5Q13017 1502 aa36.13■■■■□ 3.37
HMG20B-206ENST00000453933 KDM5CP41229 1560 aa36.1■■■■□ 3.37
HMG20B-206ENST00000453933 UHRF1BP1Q6BDS2 1440 aa36.08■■■■□ 3.37
HMG20B-206ENST00000453933 STRCQ7RTU9 1775 aa36.05■■■■□ 3.36
HMG20B-206ENST00000453933 CLIP1P30622 1438 aa36.05■■■■□ 3.36
HMG20B-206ENST00000453933 DIP2CQ9Y2E4 1556 aa36.04■■■■□ 3.36
HMG20B-206ENST00000453933 MLH3Q9UHC1 1453 aa35.99■■■■□ 3.35
HMG20B-206ENST00000453933 REREQ9P2R6 1566 aa35.98■■■■□ 3.35
HMG20B-206ENST00000453933 TRAPPC8Q9Y2L5 1435 aa35.97■■■■□ 3.35
HMG20B-206ENST00000453933 ABCA6Q8N139 1617 aa35.95■■■■□ 3.35
HMG20B-206ENST00000453933 DISP3Q9P2K9 1392 aa35.95■■■■□ 3.35
HMG20B-206ENST00000453933 ILDR2Q71H61 639 aa35.94■■■■□ 3.34
HMG20B-206ENST00000453933 ESF1Q9H501 851 aaKnown RBP35.94■■■■□ 3.34
HMG20B-206ENST00000453933 SETD1BQ9UPS6 1966 aaKnown RBP35.93■■■■□ 3.34
HMG20B-206ENST00000453933 LRRIQ1Q96JM4 1722 aa35.92■■■■□ 3.34
HMG20B-206ENST00000453933 CDC42BPBQ9Y5S2 1711 aa35.92■■■■□ 3.34
HMG20B-206ENST00000453933 PTPRTO14522 1441 aa35.91■■■■□ 3.34
HMG20B-206ENST00000453933 AGLP35573 1532 aa35.91■■■■□ 3.34
HMG20B-206ENST00000453933 C3P01024 1663 aa35.89■■■■□ 3.34
HMG20B-206ENST00000453933 ABCC1P33527 1531 aa35.87■■■■□ 3.33
HMG20B-206ENST00000453933 PREX2Q70Z35 1606 aa35.83■■■■□ 3.33
HMG20B-206ENST00000453933 CASKIN1Q8WXD9 1431 aa35.81■■■■□ 3.32
HMG20B-206ENST00000453933 ITSN2Q9NZM3 1697 aa35.78■■■■□ 3.32
HMG20B-206ENST00000453933 CNTLNQ9NXG0 1405 aa35.78■■■■□ 3.32
HMG20B-206ENST00000453933 CHIC1Q5VXU3 224 aa35.78■■■■□ 3.32
HMG20B-206ENST00000453933 KIDINS220Q9ULH0 1771 aa35.77■■■■□ 3.32
HMG20B-206ENST00000453933 LTBP4Q8N2S1 1624 aa35.77■■■■□ 3.32
HMG20B-206ENST00000453933 SOCS7O14512 581 aa35.77■■■■□ 3.32
HMG20B-206ENST00000453933 CCDC18Q5T9S5 1454 aa35.77■■■■□ 3.32
HMG20B-206ENST00000453933 NCOA1Q15788 1441 aa35.75■■■■□ 3.31
HMG20B-206ENST00000453933 ZNF777Q9ULD5 760 aaPredicted RBP35.75■■■■□ 3.31
HMG20B-206ENST00000453933 SAMD9LQ8IVG5 1584 aa35.68■■■■□ 3.3
HMG20B-206ENST00000453933 ZMYM3Q14202 1370 aa35.68■■■■□ 3.3
HMG20B-206ENST00000453933 HNRNPMP52272 730 aaKnown RBP eCLIP35.68■■■■□ 3.3
HMG20B-206ENST00000453933 CDC42BPAQ5VT25 1732 aa35.68■■■■□ 3.3
HMG20B-206ENST00000453933 NPATQ14207 1427 aa35.66■■■■□ 3.3
HMG20B-206ENST00000453933 SPAG9O60271 1321 aaKnown RBP35.66■■■■□ 3.3
HMG20B-206ENST00000453933 CAMSAP1Q5T5Y3 1602 aa35.64■■■■□ 3.3
HMG20B-206ENST00000453933 NCKAP5LQ9HCH0 1330 aa35.63■■■■□ 3.29
HMG20B-206ENST00000453933 IQSEC2Q5JU85 1478 aa35.63■■■■□ 3.29
HMG20B-206ENST00000453933 GPATCH8Q9UKJ3 1502 aaKnown RBP35.62■■■■□ 3.29
HMG20B-206ENST00000453933 SYCP2Q9BX26 1530 aa35.6■■■■□ 3.29
HMG20B-206ENST00000453933 SPATA31D1Q6ZQQ2 1576 aa35.59■■■■□ 3.29
HMG20B-206ENST00000453933 MROH2AA6NES4 1674 aa35.57■■■■□ 3.28
HMG20B-206ENST00000453933 FYCO1Q9BQS8 1478 aa35.57■■■■□ 3.28
HMG20B-206ENST00000453933 ZNF335Q9H4Z2 1342 aaPredicted RBP35.56■■■■□ 3.28
HMG20B-206ENST00000453933 SUPT6HQ7KZ85 1726 aaKnown RBP35.53■■■■□ 3.28
HMG20B-206ENST00000453933 CFDP1Q9UEE9 299 aaPredicted RBP35.53■■■■□ 3.28
HMG20B-206ENST00000453933 KIAA1107Q9UPP5 1409 aa35.52■■■■□ 3.28
HMG20B-206ENST00000453933 GGT6Q6P531 493 aa35.51■■■■□ 3.28
HMG20B-206ENST00000453933 ATP7AQ04656 1500 aa35.51■■■■□ 3.27
HMG20B-206ENST00000453933 A2MP01023 1474 aa35.49■■■■□ 3.27
HMG20B-206ENST00000453933 UBAP1LF5GYI3 381 aa35.48■■■■□ 3.27
HMG20B-206ENST00000453933 PKD2Q13563 968 aa35.48■■■■□ 3.27
HMG20B-206ENST00000453933 PTPRKQ15262 1439 aa35.48■■■■□ 3.27
HMG20B-206ENST00000453933 CLTCQ00610 1675 aaKnown RBP35.46■■■■□ 3.27
HMG20B-206ENST00000453933 PLXNC1O60486 1568 aa35.46■■■■□ 3.27
HMG20B-206ENST00000453933 PLEKHH2Q8IVE3 1493 aa35.45■■■■□ 3.27
HMG20B-206ENST00000453933 PLA2R1Q13018 1463 aa35.44■■■■□ 3.26
HMG20B-206ENST00000453933 CCNB3Q8WWL7 1395 aa35.44■■■■□ 3.26
HMG20B-206ENST00000453933 INO80Q9ULG1 1556 aaPredicted RBP35.43■■■■□ 3.26
HMG20B-206ENST00000453933 MYO3AQ8NEV4 1616 aa35.41■■■■□ 3.26
HMG20B-206ENST00000453933 TCOF1Q13428 1488 aaKnown RBP35.41■■■■□ 3.26
HMG20B-206ENST00000453933 CEP170BQ9Y4F5 1589 aaPredicted RBP35.39■■■■□ 3.26
HMG20B-206ENST00000453933 PPP6R1Q9UPN7 881 aa35.39■■■■□ 3.26
HMG20B-206ENST00000453933 ZNF644Q9H582 1327 aaPredicted RBP35.37■■■■□ 3.25
HMG20B-206ENST00000453933 ZNF142P52746 1687 aaPredicted RBP35.37■■■■□ 3.25
HMG20B-206ENST00000453933 MTUS2Q5JR59 1369 aa35.33■■■■□ 3.25
HMG20B-206ENST00000453933 MBD5Q9P267 1494 aa35.28■■■■□ 3.24
HMG20B-206ENST00000453933 A2ML1A8K2U0 1454 aa35.26■■■■□ 3.23
HMG20B-206ENST00000453933 ADGBQ8N7X0 1667 aa35.24■■■■□ 3.23
HMG20B-206ENST00000453933 FBXO31Q5XUX0 539 aaPredicted RBP35.24■■■■□ 3.23
HMG20B-206ENST00000453933 DHX29Q7Z478 1369 aaKnown RBP35.23■■■■□ 3.23
HMG20B-206ENST00000453933 RTEL1-TNFRSF6BF6WH68 1400 aa35.22■■■■□ 3.23
HMG20B-206ENST00000453933 DNMT1P26358 1616 aaKnown RBP35.21■■■■□ 3.23
HMG20B-206ENST00000453933 TIAM1Q13009 1591 aa35.2■■■■□ 3.23
HMG20B-206ENST00000453933 KIF3BO15066 747 aa35.18■■■■□ 3.22
HMG20B-206ENST00000453933 TNRQ92752 1358 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms