RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 CDC42BPAQ5VT25 1732 aa23.44■■□□□ 1.34
HSPG2-207ENST00000453796 ARHGAP5Q13017 1502 aa23.42■■□□□ 1.34
HSPG2-207ENST00000453796 ARHGEF40Q8TER5 1519 aa23.42■■□□□ 1.34
HSPG2-207ENST00000453796 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
HSPG2-207ENST00000453796 SCAPERQ9BY12 1400 aa23.41■■□□□ 1.34
HSPG2-207ENST00000453796 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
HSPG2-207ENST00000453796 MAGI2Q86UL8 1455 aa23.35■■□□□ 1.33
HSPG2-207ENST00000453796 ZFYVE16Q7Z3T8 1539 aa23.33■■□□□ 1.33
HSPG2-207ENST00000453796 KDM5CP41229 1560 aa23.33■■□□□ 1.33
HSPG2-207ENST00000453796 ABCC1P33527 1531 aa23.33■■□□□ 1.32
HSPG2-207ENST00000453796 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.32
HSPG2-207ENST00000453796 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.32
HSPG2-207ENST00000453796 SIGLEC1Q9BZZ2 1709 aa23.32■■□□□ 1.32
HSPG2-207ENST00000453796 VPS8Q8N3P4 1428 aa23.32■■□□□ 1.32
HSPG2-207ENST00000453796 ADAMTSL3P82987 1691 aa23.32■■□□□ 1.32
HSPG2-207ENST00000453796 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
HSPG2-207ENST00000453796 ZNF518AQ6AHZ1 1483 aa23.31■■□□□ 1.32
HSPG2-207ENST00000453796 BCORL1Q5H9F3 1711 aa23.31■■□□□ 1.32
HSPG2-207ENST00000453796 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
HSPG2-207ENST00000453796 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
HSPG2-207ENST00000453796 ARHGEF12Q9NZN5 1544 aa23.29■■□□□ 1.32
HSPG2-207ENST00000453796 SAMD9LQ8IVG5 1584 aa23.28■■□□□ 1.32
HSPG2-207ENST00000453796 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
HSPG2-207ENST00000453796 HECW2Q9P2P5 1572 aa23.25■■□□□ 1.31
HSPG2-207ENST00000453796 TRAPPC8Q9Y2L5 1435 aa23.24■■□□□ 1.31
HSPG2-207ENST00000453796 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
HSPG2-207ENST00000453796 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
HSPG2-207ENST00000453796 ATP10AO60312 1499 aa23.21■■□□□ 1.31
HSPG2-207ENST00000453796 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
HSPG2-207ENST00000453796 SUPT6HQ7KZ85 1726 aaKnown RBP23.21■■□□□ 1.31
HSPG2-207ENST00000453796 MADDQ8WXG6 1647 aa23.2■■□□□ 1.3
HSPG2-207ENST00000453796 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
HSPG2-207ENST00000453796 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
HSPG2-207ENST00000453796 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
HSPG2-207ENST00000453796 ABCA6Q8N139 1617 aa23.19■■□□□ 1.3
HSPG2-207ENST00000453796 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
HSPG2-207ENST00000453796 C9orf84Q5VXU9 1444 aa23.18■■□□□ 1.3
HSPG2-207ENST00000453796 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
HSPG2-207ENST00000453796 REREQ9P2R6 1566 aa23.16■■□□□ 1.3
HSPG2-207ENST00000453796 CFDP1Q9UEE9 299 aaPredicted RBP23.16■■□□□ 1.3
HSPG2-207ENST00000453796 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
HSPG2-207ENST00000453796 LRRC9Q6ZRR7 1453 aa23.16■■□□□ 1.3
HSPG2-207ENST00000453796 KIAA1107Q9UPP5 1409 aa23.16■■□□□ 1.3
HSPG2-207ENST00000453796 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
HSPG2-207ENST00000453796 PTPRMP28827 1452 aa23.15■■□□□ 1.3
HSPG2-207ENST00000453796 PLEKHH2Q8IVE3 1493 aa23.15■■□□□ 1.3
HSPG2-207ENST00000453796 RIMS1Q86UR5 1692 aaKnown RBP23.13■■□□□ 1.29
HSPG2-207ENST00000453796 FER1L4A9Z1Z3 1794 aa23.1■■□□□ 1.29
HSPG2-207ENST00000453796 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.29
HSPG2-207ENST00000453796 INO80Q9ULG1 1556 aaPredicted RBP23.09■■□□□ 1.29
HSPG2-207ENST00000453796 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.28
HSPG2-207ENST00000453796 MBD5Q9P267 1494 aa23.07■■□□□ 1.28
HSPG2-207ENST00000453796 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
HSPG2-207ENST00000453796 AGLP35573 1532 aa23.06■■□□□ 1.28
HSPG2-207ENST00000453796 ATP7AQ04656 1500 aa23.06■■□□□ 1.28
HSPG2-207ENST00000453796 MYT1LQ9UL68 1186 aa23.05■■□□□ 1.28
HSPG2-207ENST00000453796 CAMSAP2Q08AD1 1489 aa23.03■■□□□ 1.28
HSPG2-207ENST00000453796 SPAG9O60271 1321 aaKnown RBP23.03■■□□□ 1.28
HSPG2-207ENST00000453796 MLECQ14165 292 aa23.01■■□□□ 1.27
HSPG2-207ENST00000453796 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
HSPG2-207ENST00000453796 ADGBQ8N7X0 1667 aa22.97■■□□□ 1.27
HSPG2-207ENST00000453796 ARHGEF5Q12774 1597 aa22.97■■□□□ 1.27
HSPG2-207ENST00000453796 CCDC141Q6ZP82 1450 aa22.96■■□□□ 1.27
HSPG2-207ENST00000453796 RTEL1-TNFRSF6BF6WH68 1400 aa22.95■■□□□ 1.26
HSPG2-207ENST00000453796 MYOM3Q5VTT5 1437 aa22.95■■□□□ 1.26
HSPG2-207ENST00000453796 A2MP01023 1474 aa22.93■■□□□ 1.26
HSPG2-207ENST00000453796 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
HSPG2-207ENST00000453796 APLP2Q06481 763 aa22.9■■□□□ 1.26
HSPG2-207ENST00000453796 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
HSPG2-207ENST00000453796 LMTK3Q96Q04 1460 aa22.9■■□□□ 1.26
HSPG2-207ENST00000453796 C3P01024 1663 aa22.89■■□□□ 1.25
HSPG2-207ENST00000453796 MAST1Q9Y2H9 1570 aa22.86■■□□□ 1.25
HSPG2-207ENST00000453796 MROH2AA6NES4 1674 aa22.85■■□□□ 1.25
HSPG2-207ENST00000453796 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.25
HSPG2-207ENST00000453796 PTPN23Q9H3S7 1636 aa22.83■■□□□ 1.25
HSPG2-207ENST00000453796 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.25
HSPG2-207ENST00000453796 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.24
HSPG2-207ENST00000453796 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
HSPG2-207ENST00000453796 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
HSPG2-207ENST00000453796 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
HSPG2-207ENST00000453796 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
HSPG2-207ENST00000453796 CLTCQ00610 1675 aaKnown RBP22.8■■□□□ 1.24
HSPG2-207ENST00000453796 FGD6Q6ZV73 1430 aa22.79■■□□□ 1.24
HSPG2-207ENST00000453796 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
HSPG2-207ENST00000453796 TSPY4P0CV99 314 aa22.78■■□□□ 1.24
HSPG2-207ENST00000453796 TSPY10P0CW01 314 aa22.78■■□□□ 1.24
HSPG2-207ENST00000453796 ESF1Q9H501 851 aaKnown RBP22.75■■□□□ 1.23
HSPG2-207ENST00000453796 DNMT1P26358 1616 aaKnown RBP22.75■■□□□ 1.23
HSPG2-207ENST00000453796 GGT6Q6P531 493 aa22.73■■□□□ 1.23
HSPG2-207ENST00000453796 PPP6R1Q9UPN7 881 aa22.73■■□□□ 1.23
HSPG2-207ENST00000453796 ABCC5O15440 1437 aa22.73■■□□□ 1.23
HSPG2-207ENST00000453796 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
HSPG2-207ENST00000453796 ZMYM3Q14202 1370 aa22.72■■□□□ 1.23
HSPG2-207ENST00000453796 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
HSPG2-207ENST00000453796 HSPA2P54652 639 aa22.7■■□□□ 1.22
HSPG2-207ENST00000453796 DAPK1P53355 1430 aa22.7■■□□□ 1.22
HSPG2-207ENST00000453796 FAM135AQ9P2D6 1515 aa22.7■■□□□ 1.22
HSPG2-207ENST00000453796 RNF17Q9BXT8 1623 aaKnown RBP22.7■■□□□ 1.22
HSPG2-207ENST00000453796 NPATQ14207 1427 aa22.69■■□□□ 1.22
HSPG2-207ENST00000453796 UHRF1BP1Q6BDS2 1440 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms