RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDR1-239ENST00000452441 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
DDR1-239ENST00000452441 NBR1Q14596 966 aa15.23■□□□□ 0.03
DDR1-239ENST00000452441 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
DDR1-239ENST00000452441 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
DDR1-239ENST00000452441 HFM1A2PYH4 1435 aa15.23■□□□□ 0.03
DDR1-239ENST00000452441 PKD2Q13563 968 aa15.22■□□□□ 0.03
DDR1-239ENST00000452441 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
DDR1-239ENST00000452441 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
DDR1-239ENST00000452441 UACAQ9BZF9 1416 aa15.19■□□□□ 0.02
DDR1-239ENST00000452441 TARBP1Q13395 1621 aaKnown RBP15.19■□□□□ 0.02
DDR1-239ENST00000452441 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
DDR1-239ENST00000452441 KDM6BO15054 1643 aa15.17■□□□□ 0.02
DDR1-239ENST00000452441 DCAF11Q8TEB1 546 aa15.17■□□□□ 0.02
DDR1-239ENST00000452441 DENND4BO75064 1496 aaPredicted RBP15.16■□□□□ 0.02
DDR1-239ENST00000452441 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
DDR1-239ENST00000452441 KDM5BQ9UGL1 1544 aa15.16■□□□□ 0.02
DDR1-239ENST00000452441 SUPT6HQ7KZ85 1726 aaKnown RBP15.16■□□□□ 0.02
DDR1-239ENST00000452441 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
DDR1-239ENST00000452441 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
DDR1-239ENST00000452441 EHBP1L1Q8N3D4 1523 aa15.14■□□□□ 0.01
DDR1-239ENST00000452441 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDR1-239ENST00000452441 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
DDR1-239ENST00000452441 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
DDR1-239ENST00000452441 EPRSP07814 1512 aaKnown RBP15.11■□□□□ 0.01
DDR1-239ENST00000452441 CARMIL2Q6F5E8 1435 aa15.11■□□□□ 0.01
DDR1-239ENST00000452441 NUP155O75694 1391 aa15.1■□□□□ 0.01
DDR1-239ENST00000452441 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
DDR1-239ENST00000452441 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
DDR1-239ENST00000452441 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
DDR1-239ENST00000452441 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
DDR1-239ENST00000452441 IQGAP2Q13576 1575 aa15.09■□□□□ 0.01
DDR1-239ENST00000452441 ADAMTS12P58397 1594 aa15.07■□□□□ 0
DDR1-239ENST00000452441 C11orf95C9JLR9 678 aaPredicted RBP15.06■□□□□ 0
DDR1-239ENST00000452441 MRC2Q9UBG0 1479 aa15.05■□□□□ 0
DDR1-239ENST00000452441 HECW1Q76N89 1606 aa15.05■□□□□ -0
DDR1-239ENST00000452441 TCOF1Q13428 1488 aaKnown RBP15.05■□□□□ -0
DDR1-239ENST00000452441 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
DDR1-239ENST00000452441 WDR62O43379 1518 aa15.04■□□□□ -0
DDR1-239ENST00000452441 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
DDR1-239ENST00000452441 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
DDR1-239ENST00000452441 PTPRGP23470 1445 aa15.01□□□□□ -0.01
DDR1-239ENST00000452441 MSH5O43196 834 aa15□□□□□ -0.01
DDR1-239ENST00000452441 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
DDR1-239ENST00000452441 PRKRIP1Q9H875 184 aaPredicted RBP15□□□□□ -0.01
DDR1-239ENST00000452441 TNNT2P45379 298 aaPredicted RBP14.99□□□□□ -0.01
DDR1-239ENST00000452441 NUTM2DQ5VT03 806 aaPredicted RBP14.99□□□□□ -0.01
DDR1-239ENST00000452441 DISP1Q96F81 1524 aa14.99□□□□□ -0.01
DDR1-239ENST00000452441 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
DDR1-239ENST00000452441 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
DDR1-239ENST00000452441 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
DDR1-239ENST00000452441 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
DDR1-239ENST00000452441 SAFB2Q14151 953 aaKnown RBP eCLIP14.97□□□□□ -0.01
DDR1-239ENST00000452441 GGT6Q6P531 493 aa14.97□□□□□ -0.01
DDR1-239ENST00000452441 NUP153P49790 1475 aaKnown RBP14.97□□□□□ -0.01
DDR1-239ENST00000452441 RTL5Q5HYW3 569 aaPredicted RBP14.97□□□□□ -0.01
DDR1-239ENST00000452441 PPP4R2Q9NY27 417 aa14.97□□□□□ -0.01
DDR1-239ENST00000452441 ABCC5O15440 1437 aa14.96□□□□□ -0.01
DDR1-239ENST00000452441 DAPK1P53355 1430 aa14.96□□□□□ -0.01
DDR1-239ENST00000452441 MLECQ14165 292 aa14.96□□□□□ -0.01
DDR1-239ENST00000452441 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
DDR1-239ENST00000452441 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
DDR1-239ENST00000452441 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
DDR1-239ENST00000452441 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
DDR1-239ENST00000452441 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
DDR1-239ENST00000452441 KIAA0556O60303 1618 aa14.93□□□□□ -0.02
DDR1-239ENST00000452441 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
DDR1-239ENST00000452441 CCDC7Q96M83 1385 aa14.93□□□□□ -0.02
DDR1-239ENST00000452441 ANKRD30BQ9BXX2 1392 aa14.92□□□□□ -0.02
DDR1-239ENST00000452441 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
DDR1-239ENST00000452441 PLIN1O60240 522 aa14.92□□□□□ -0.02
DDR1-239ENST00000452441 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
DDR1-239ENST00000452441 KIAA0586Q9BVV6 1533 aa14.91□□□□□ -0.02
DDR1-239ENST00000452441 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
DDR1-239ENST00000452441 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
DDR1-239ENST00000452441 KIF3BO15066 747 aa14.89□□□□□ -0.03
DDR1-239ENST00000452441 CANXP27824 592 aaKnown RBP14.89□□□□□ -0.03
DDR1-239ENST00000452441 EFCAB2Q5VUJ9 269 aa14.89□□□□□ -0.03
DDR1-239ENST00000452441 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
DDR1-239ENST00000452441 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
DDR1-239ENST00000452441 TEX14Q8IWB6 1497 aa14.88□□□□□ -0.03
DDR1-239ENST00000452441 RAPGEF6Q8TEU7 1601 aa14.88□□□□□ -0.03
DDR1-239ENST00000452441 DNMT1P26358 1616 aaKnown RBP14.87□□□□□ -0.03
DDR1-239ENST00000452441 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
DDR1-239ENST00000452441 ZBED9Q6R2W3 1325 aa14.87□□□□□ -0.03
DDR1-239ENST00000452441 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
DDR1-239ENST00000452441 ROCK2O75116 1388 aaKnown RBP14.87□□□□□ -0.03
DDR1-239ENST00000452441 RPRD2Q5VT52 1461 aaKnown RBP14.87□□□□□ -0.03
DDR1-239ENST00000452441 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
DDR1-239ENST00000452441 KIF14Q15058 1648 aa14.86□□□□□ -0.03
DDR1-239ENST00000452441 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
DDR1-239ENST00000452441 ARXQ96QS3 562 aa14.85□□□□□ -0.03
DDR1-239ENST00000452441 NCOA1Q15788 1441 aa14.85□□□□□ -0.03
DDR1-239ENST00000452441 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
DDR1-239ENST00000452441 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
DDR1-239ENST00000452441 PZPP20742 1482 aa14.84□□□□□ -0.03
DDR1-239ENST00000452441 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.03
DDR1-239ENST00000452441 CAMSAP2Q08AD1 1489 aa14.84□□□□□ -0.03
DDR1-239ENST00000452441 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
DDR1-239ENST00000452441 SKAP1Q86WV1 359 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms