RNA–Protein interactions for RNA: ENST00000450932.2

SLF1-202, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 1 (best)

Gene SLF1, Length 2,318 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-202ENST00000450932 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
SLF1-202ENST00000450932 SOX12O15370 315 aa8.68□□□□□ -1.02
SLF1-202ENST00000450932 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
SLF1-202ENST00000450932 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
SLF1-202ENST00000450932 ERCC6Q03468 1493 aa8.66□□□□□ -1.02
SLF1-202ENST00000450932 ZCCHC6Q5VYS8 1495 aaKnown RBP8.65□□□□□ -1.03
SLF1-202ENST00000450932 KDM2AQ9Y2K7 1162 aa8.64□□□□□ -1.03
SLF1-202ENST00000450932 SNPHO15079 494 aa8.63□□□□□ -1.03
SLF1-202ENST00000450932 SCRIBQ14160 1630 aa8.63□□□□□ -1.03
SLF1-202ENST00000450932 ST18O60284 1047 aa8.63□□□□□ -1.03
SLF1-202ENST00000450932 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
SLF1-202ENST00000450932 NLRP6P59044 892 aa8.62□□□□□ -1.03
SLF1-202ENST00000450932 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
SLF1-202ENST00000450932 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
SLF1-202ENST00000450932 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
SLF1-202ENST00000450932 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
SLF1-202ENST00000450932 FBXO22Q8NEZ5 403 aa8.57□□□□□ -1.04
SLF1-202ENST00000450932 PAXIP1Q6ZW49 1069 aaPredicted RBP8.56□□□□□ -1.04
SLF1-202ENST00000450932 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
SLF1-202ENST00000450932 CFAP44Q96MT7 982 aa8.55□□□□□ -1.04
SLF1-202ENST00000450932 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
SLF1-202ENST00000450932 CHGAP10645 457 aaKnown RBP8.54□□□□□ -1.04
SLF1-202ENST00000450932 THOC2Q8NI27 1593 aaKnown RBP8.54□□□□□ -1.04
SLF1-202ENST00000450932 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
SLF1-202ENST00000450932 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.05
SLF1-202ENST00000450932 PCDH10Q9P2E7 1040 aa8.51□□□□□ -1.05
SLF1-202ENST00000450932 LAMC3Q9Y6N6 1575 aa8.51□□□□□ -1.05
SLF1-202ENST00000450932 ZNF710Q8N1W2 664 aa8.51□□□□□ -1.05
SLF1-202ENST00000450932 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
SLF1-202ENST00000450932 HS6ST3Q8IZP7 471 aa8.5□□□□□ -1.05
SLF1-202ENST00000450932 EMP3P54852 163 aa8.49□□□□□ -1.05
SLF1-202ENST00000450932 SMARCA2P51531 1590 aa8.49□□□□□ -1.05
SLF1-202ENST00000450932 HOXB3P14651 431 aaPredicted RBP8.48□□□□□ -1.05
SLF1-202ENST00000450932 DOK7Q18PE1 504 aa8.48□□□□□ -1.05
SLF1-202ENST00000450932 PPP1R37O75864 691 aa8.46□□□□□ -1.06
SLF1-202ENST00000450932 RIMBP2O15034 1052 aa8.45□□□□□ -1.06
SLF1-202ENST00000450932 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
SLF1-202ENST00000450932 FAM205CA6NFA0 338 aa8.44□□□□□ -1.06
SLF1-202ENST00000450932 PDS5BQ9NTI5 1447 aa8.43□□□□□ -1.06
SLF1-202ENST00000450932 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
SLF1-202ENST00000450932 ATAD2BQ9ULI0 1458 aa8.41□□□□□ -1.06
SLF1-202ENST00000450932 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
SLF1-202ENST00000450932 HOXB1P14653 301 aaPredicted RBP8.4□□□□□ -1.06
SLF1-202ENST00000450932 TMC2Q8TDI7 906 aa8.4□□□□□ -1.06
SLF1-202ENST00000450932 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
SLF1-202ENST00000450932 VSIG10Q8N0Z9 540 aa8.4□□□□□ -1.07
SLF1-202ENST00000450932 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
SLF1-202ENST00000450932 ERBB3P21860 1342 aa8.38□□□□□ -1.07
SLF1-202ENST00000450932 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.38□□□□□ -1.07
SLF1-202ENST00000450932 PEG3Q9GZU2 1588 aa8.38□□□□□ -1.07
SLF1-202ENST00000450932 WDR62O43379 1518 aa8.38□□□□□ -1.07
SLF1-202ENST00000450932 POTEB3A0JP26 581 aa8.37□□□□□ -1.07
SLF1-202ENST00000450932 POTEBQ6S5H4 581 aa8.37□□□□□ -1.07
SLF1-202ENST00000450932 BCANQ96GW7 911 aa8.37□□□□□ -1.07
SLF1-202ENST00000450932 KIF3CO14782 793 aa8.36□□□□□ -1.07
SLF1-202ENST00000450932 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
SLF1-202ENST00000450932 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
SLF1-202ENST00000450932 ZSWIM6Q9HCJ5 1215 aa8.36□□□□□ -1.07
SLF1-202ENST00000450932 MRC2Q9UBG0 1479 aa8.36□□□□□ -1.07
SLF1-202ENST00000450932 SPRYD3Q8NCJ5 442 aa8.35□□□□□ -1.07
SLF1-202ENST00000450932 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
SLF1-202ENST00000450932 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
SLF1-202ENST00000450932 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.083e-6■■□□□ 11.9
SLF1-202ENST00000450932 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
SLF1-202ENST00000450932 NESP48681 1621 aa8.32□□□□□ -1.08
SLF1-202ENST00000450932 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
SLF1-202ENST00000450932 SMARCA4P51532 1647 aa8.3□□□□□ -1.08
SLF1-202ENST00000450932 BAZ1BQ9UIG0 1483 aaKnown RBP8.3□□□□□ -1.08
SLF1-202ENST00000450932 RIMBP3CA6NJZ7 1639 aa8.29□□□□□ -1.08
SLF1-202ENST00000450932 RIMBP3BA6NNM3 1639 aa8.29□□□□□ -1.08
SLF1-202ENST00000450932 RIMBP3Q9UFD9 1639 aa8.29□□□□□ -1.08
SLF1-202ENST00000450932 GPHNQ9NQX3 736 aaPredicted RBP8.29□□□□□ -1.08
SLF1-202ENST00000450932 GTPBP6O43824 516 aaPredicted RBP8.28□□□□□ -1.08
SLF1-202ENST00000450932 NUDT7P0C024 238 aa8.28□□□□□ -1.08
SLF1-202ENST00000450932 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
SLF1-202ENST00000450932 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
SLF1-202ENST00000450932 PLPP6Q8IY26 295 aa8.28□□□□□ -1.08
SLF1-202ENST00000450932 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
SLF1-202ENST00000450932 PCDHGA4Q9Y5G9 962 aa8.27□□□□□ -1.09
SLF1-202ENST00000450932 DSG2Q14126 1118 aa8.26□□□□□ -1.09
SLF1-202ENST00000450932 SLC34A2O95436 690 aa8.26□□□□□ -1.09
SLF1-202ENST00000450932 FOXK1P85037 733 aa8.26□□□□□ -1.09
SLF1-202ENST00000450932 CADPSQ9ULU8 1353 aa8.25□□□□□ -1.09
SLF1-202ENST00000450932 ZNF316A6NFI3 1004 aaPredicted RBP8.25□□□□□ -1.09
SLF1-202ENST00000450932 ZNF687Q8N1G0 1237 aa8.23□□□□□ -1.09
SLF1-202ENST00000450932 MMRN1Q13201 1228 aa8.22□□□□□ -1.09
SLF1-202ENST00000450932 ARHGEF11O15085 1522 aa8.22□□□□□ -1.09
SLF1-202ENST00000450932 LHX6Q9UPM6 363 aa8.21□□□□□ -1.09
SLF1-202ENST00000450932 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
SLF1-202ENST00000450932 PDE4AP27815 886 aa8.2□□□□□ -1.1
SLF1-202ENST00000450932 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
SLF1-202ENST00000450932 CEP164Q9UPV0 1460 aa8.2□□□□□ -1.1
SLF1-202ENST00000450932 UPF1Q92900 1129 aaKnown RBP eCLIP8.19□□□□□ -1.1
SLF1-202ENST00000450932 NCKAP5LQ9HCH0 1330 aa8.19□□□□□ -1.1
SLF1-202ENST00000450932 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
SLF1-202ENST00000450932 PPP1R15BQ5SWA1 713 aa8.19□□□□□ -1.1
SLF1-202ENST00000450932 LARP6Q9BRS8 491 aaKnown RBP8.19□□□□□ -1.1
SLF1-202ENST00000450932 TBC1D12O60347 775 aa8.18□□□□□ -1.1
SLF1-202ENST00000450932 ANKRD13DQ6ZTN6 518 aa8.17□□□□□ -1.1
SLF1-202ENST00000450932 DDX27Q96GQ7 796 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms