RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 TROQ12816 1431 aaPredicted RBP19.2■□□□□ 0.66
SS18L1-203ENST00000450482 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
SS18L1-203ENST00000450482 LMTK3Q96Q04 1460 aa19.17■□□□□ 0.66
SS18L1-203ENST00000450482 PCF11O94913 1555 aaKnown RBP19.17■□□□□ 0.66
SS18L1-203ENST00000450482 CLIP1P30622 1438 aa19.15■□□□□ 0.66
SS18L1-203ENST00000450482 KIF14Q15058 1648 aa19.14■□□□□ 0.66
SS18L1-203ENST00000450482 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
SS18L1-203ENST00000450482 SIGLEC1Q9BZZ2 1709 aa19.13■□□□□ 0.65
SS18L1-203ENST00000450482 ATP10AO60312 1499 aa19.12■□□□□ 0.65
SS18L1-203ENST00000450482 ZNF518AQ6AHZ1 1483 aa19.11■□□□□ 0.65
SS18L1-203ENST00000450482 C9orf84Q5VXU9 1444 aa19.11■□□□□ 0.65
SS18L1-203ENST00000450482 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
SS18L1-203ENST00000450482 ARHGAP5Q13017 1502 aa19.1■□□□□ 0.65
SS18L1-203ENST00000450482 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
SS18L1-203ENST00000450482 MYO5CQ9NQX4 1742 aa19.08■□□□□ 0.65
SS18L1-203ENST00000450482 KDM5CP41229 1560 aa19.08■□□□□ 0.65
SS18L1-203ENST00000450482 MLECQ14165 292 aa19.08■□□□□ 0.64
SS18L1-203ENST00000450482 AFAP1Q8N556 730 aa19.08■□□□□ 0.64
SS18L1-203ENST00000450482 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
SS18L1-203ENST00000450482 FBXO41Q8TF61 875 aa19.04■□□□□ 0.64
SS18L1-203ENST00000450482 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
SS18L1-203ENST00000450482 HSPA2P54652 639 aa19.03■□□□□ 0.64
SS18L1-203ENST00000450482 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
SS18L1-203ENST00000450482 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
SS18L1-203ENST00000450482 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
SS18L1-203ENST00000450482 TRAPPC8Q9Y2L5 1435 aa19■□□□□ 0.63
SS18L1-203ENST00000450482 ABCC1P33527 1531 aa19■□□□□ 0.63
SS18L1-203ENST00000450482 REREQ9P2R6 1566 aa19■□□□□ 0.63
SS18L1-203ENST00000450482 DIP2CQ9Y2E4 1556 aa18.99■□□□□ 0.63
SS18L1-203ENST00000450482 PREX2Q70Z35 1606 aa18.99■□□□□ 0.63
SS18L1-203ENST00000450482 FER1L4A9Z1Z3 1794 aa18.97■□□□□ 0.63
SS18L1-203ENST00000450482 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
SS18L1-203ENST00000450482 CEBPAP49715 358 aaPredicted RBP18.95■□□□□ 0.62
SS18L1-203ENST00000450482 AGLP35573 1532 aa18.95■□□□□ 0.62
SS18L1-203ENST00000450482 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
SS18L1-203ENST00000450482 ABCA6Q8N139 1617 aa18.93■□□□□ 0.62
SS18L1-203ENST00000450482 GPATCH8Q9UKJ3 1502 aaKnown RBP18.93■□□□□ 0.62
SS18L1-203ENST00000450482 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
SS18L1-203ENST00000450482 KIAA1107Q9UPP5 1409 aa18.88■□□□□ 0.61
SS18L1-203ENST00000450482 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
SS18L1-203ENST00000450482 SAMD9LQ8IVG5 1584 aa18.87■□□□□ 0.61
SS18L1-203ENST00000450482 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
SS18L1-203ENST00000450482 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
SS18L1-203ENST00000450482 PREX1Q8TCU6 1659 aa18.85■□□□□ 0.61
SS18L1-203ENST00000450482 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
SS18L1-203ENST00000450482 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
SS18L1-203ENST00000450482 KIDINS220Q9ULH0 1771 aa18.85■□□□□ 0.61
SS18L1-203ENST00000450482 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
SS18L1-203ENST00000450482 CNTLNQ9NXG0 1405 aa18.84■□□□□ 0.61
SS18L1-203ENST00000450482 SPAG9O60271 1321 aaKnown RBP18.84■□□□□ 0.61
SS18L1-203ENST00000450482 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.61
SS18L1-203ENST00000450482 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.61
SS18L1-203ENST00000450482 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.64e-7■■■■■ 29.4
SS18L1-203ENST00000450482 CERKQ8TCT0 537 aa18.83■□□□□ 0.6
SS18L1-203ENST00000450482 ESF1Q9H501 851 aaKnown RBP18.82■□□□□ 0.6
SS18L1-203ENST00000450482 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
SS18L1-203ENST00000450482 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
SS18L1-203ENST00000450482 PLXNC1O60486 1568 aa18.77■□□□□ 0.6
SS18L1-203ENST00000450482 INO80Q9ULG1 1556 aaPredicted RBP18.77■□□□□ 0.6
SS18L1-203ENST00000450482 NPATQ14207 1427 aa18.77■□□□□ 0.6
SS18L1-203ENST00000450482 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
SS18L1-203ENST00000450482 C3P01024 1663 aa18.77■□□□□ 0.6
SS18L1-203ENST00000450482 A2MP01023 1474 aa18.76■□□□□ 0.59
SS18L1-203ENST00000450482 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
SS18L1-203ENST00000450482 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
SS18L1-203ENST00000450482 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
SS18L1-203ENST00000450482 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
SS18L1-203ENST00000450482 PTPRTO14522 1441 aa18.74■□□□□ 0.59
SS18L1-203ENST00000450482 TIAM1Q13009 1591 aa18.74■□□□□ 0.59
SS18L1-203ENST00000450482 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
SS18L1-203ENST00000450482 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
SS18L1-203ENST00000450482 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
SS18L1-203ENST00000450482 RTEL1-TNFRSF6BF6WH68 1400 aa18.7■□□□□ 0.58
SS18L1-203ENST00000450482 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
SS18L1-203ENST00000450482 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
SS18L1-203ENST00000450482 PTPRKQ15262 1439 aa18.67■□□□□ 0.58
SS18L1-203ENST00000450482 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
SS18L1-203ENST00000450482 GGT6Q6P531 493 aa18.66■□□□□ 0.58
SS18L1-203ENST00000450482 SUPT6HQ7KZ85 1726 aaKnown RBP18.65■□□□□ 0.58
SS18L1-203ENST00000450482 DHX29Q7Z478 1369 aaKnown RBP18.65■□□□□ 0.58
SS18L1-203ENST00000450482 CCDC141Q6ZP82 1450 aa18.63■□□□□ 0.57
SS18L1-203ENST00000450482 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
SS18L1-203ENST00000450482 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
SS18L1-203ENST00000450482 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
SS18L1-203ENST00000450482 ADGBQ8N7X0 1667 aa18.61■□□□□ 0.57
SS18L1-203ENST00000450482 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
SS18L1-203ENST00000450482 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
SS18L1-203ENST00000450482 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
SS18L1-203ENST00000450482 VPS8Q8N3P4 1428 aa18.59■□□□□ 0.57
SS18L1-203ENST00000450482 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.57
SS18L1-203ENST00000450482 PKD2Q13563 968 aa18.58■□□□□ 0.56
SS18L1-203ENST00000450482 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
SS18L1-203ENST00000450482 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
SS18L1-203ENST00000450482 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
SS18L1-203ENST00000450482 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
SS18L1-203ENST00000450482 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
SS18L1-203ENST00000450482 FAM135AQ9P2D6 1515 aa18.56■□□□□ 0.56
SS18L1-203ENST00000450482 KIF3BO15066 747 aa18.56■□□□□ 0.56
SS18L1-203ENST00000450482 LRRC9Q6ZRR7 1453 aa18.56■□□□□ 0.56
SS18L1-203ENST00000450482 A2ML1A8K2U0 1454 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms