RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 CFDP1Q9UEE9 299 aaPredicted RBP22.25■■□□□ 1.15
APP-210ENST00000448850 ARAP3Q8WWN8 1544 aa22.25■■□□□ 1.15
APP-210ENST00000448850 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
APP-210ENST00000448850 TCOF1Q13428 1488 aaKnown RBP22.23■■□□□ 1.15
APP-210ENST00000448850 CD109Q6YHK3 1445 aa22.22■■□□□ 1.15
APP-210ENST00000448850 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
APP-210ENST00000448850 TSPOAP1O95153 1857 aa22.2■■□□□ 1.15
APP-210ENST00000448850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
APP-210ENST00000448850 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
APP-210ENST00000448850 CAMSAP2Q08AD1 1489 aa22.19■■□□□ 1.14
APP-210ENST00000448850 SAMD9LQ8IVG5 1584 aa22.19■■□□□ 1.14
APP-210ENST00000448850 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
APP-210ENST00000448850 ZNF644Q9H582 1327 aaPredicted RBP22.16■■□□□ 1.14
APP-210ENST00000448850 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
APP-210ENST00000448850 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
APP-210ENST00000448850 FANCAO15360 1455 aa22.15■■□□□ 1.14
APP-210ENST00000448850 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.14
APP-210ENST00000448850 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
APP-210ENST00000448850 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
APP-210ENST00000448850 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
APP-210ENST00000448850 ABCC1P33527 1531 aa22.1■■□□□ 1.13
APP-210ENST00000448850 CROCC2H7BZ55 1655 aa22.09■■□□□ 1.13
APP-210ENST00000448850 ARHGEF5Q12774 1597 aa22.09■■□□□ 1.13
APP-210ENST00000448850 SYCP2Q9BX26 1530 aa22.08■■□□□ 1.13
APP-210ENST00000448850 NEO1Q92859 1461 aa22.08■■□□□ 1.12
APP-210ENST00000448850 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
APP-210ENST00000448850 ITGAEP38570 1179 aa22.07■■□□□ 1.12
APP-210ENST00000448850 AKNAQ7Z591 1439 aa22.07■■□□□ 1.12
APP-210ENST00000448850 TEX14Q8IWB6 1497 aa22.05■■□□□ 1.12
APP-210ENST00000448850 MBD5Q9P267 1494 aa22.05■■□□□ 1.12
APP-210ENST00000448850 ADGRL1O94910 1474 aa22.05■■□□□ 1.12
APP-210ENST00000448850 DAPK1P53355 1430 aa22.05■■□□□ 1.12
APP-210ENST00000448850 ARHGEF12Q9NZN5 1544 aa22.04■■□□□ 1.12
APP-210ENST00000448850 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
APP-210ENST00000448850 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
APP-210ENST00000448850 ABCC5O15440 1437 aa22.03■■□□□ 1.12
APP-210ENST00000448850 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
APP-210ENST00000448850 CCDC141Q6ZP82 1450 aa22.01■■□□□ 1.11
APP-210ENST00000448850 ADGBQ8N7X0 1667 aa22.01■■□□□ 1.11
APP-210ENST00000448850 PTPRKQ15262 1439 aa22.01■■□□□ 1.11
APP-210ENST00000448850 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
APP-210ENST00000448850 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
APP-210ENST00000448850 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
APP-210ENST00000448850 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
APP-210ENST00000448850 MAST1Q9Y2H9 1570 aa21.96■■□□□ 1.11
APP-210ENST00000448850 TSPY4P0CV99 314 aa21.94■■□□□ 1.1
APP-210ENST00000448850 TSPY10P0CW01 314 aa21.94■■□□□ 1.1
APP-210ENST00000448850 CHIC2Q9UKJ5 165 aa21.94■■□□□ 1.1
APP-210ENST00000448850 C9orf84Q5VXU9 1444 aa21.93■■□□□ 1.1
APP-210ENST00000448850 POGZQ7Z3K3 1410 aa21.92■■□□□ 1.1
APP-210ENST00000448850 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
APP-210ENST00000448850 ZNF518AQ6AHZ1 1483 aa21.92■■□□□ 1.1
APP-210ENST00000448850 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
APP-210ENST00000448850 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
APP-210ENST00000448850 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
APP-210ENST00000448850 KDM5CP41229 1560 aa21.9■■□□□ 1.1
APP-210ENST00000448850 ROCK1Q13464 1354 aa21.9■■□□□ 1.1
APP-210ENST00000448850 INO80Q9ULG1 1556 aaPredicted RBP21.89■■□□□ 1.09
APP-210ENST00000448850 FRMPD1Q5SYB0 1578 aa21.88■■□□□ 1.09
APP-210ENST00000448850 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
APP-210ENST00000448850 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
APP-210ENST00000448850 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
APP-210ENST00000448850 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
APP-210ENST00000448850 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
APP-210ENST00000448850 ZFYVE16Q7Z3T8 1539 aa21.86■■□□□ 1.09
APP-210ENST00000448850 SPAG9O60271 1321 aaKnown RBP21.86■■□□□ 1.09
APP-210ENST00000448850 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
APP-210ENST00000448850 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
APP-210ENST00000448850 HECW2Q9P2P5 1572 aa21.85■■□□□ 1.09
APP-210ENST00000448850 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
APP-210ENST00000448850 RRP7BPQ9NSQ0 103 aa21.85■■□□□ 1.09
APP-210ENST00000448850 NAIPQ13075 1403 aa21.84■■□□□ 1.09
APP-210ENST00000448850 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.08
APP-210ENST00000448850 MLH3Q9UHC1 1453 aa21.83■■□□□ 1.08
APP-210ENST00000448850 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.08
APP-210ENST00000448850 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
APP-210ENST00000448850 KDM6BO15054 1643 aa21.79■■□□□ 1.08
APP-210ENST00000448850 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
APP-210ENST00000448850 MYT1LQ9UL68 1186 aa21.78■■□□□ 1.08
APP-210ENST00000448850 RAB3GAP2Q9H2M9 1393 aa21.77■■□□□ 1.08
APP-210ENST00000448850 ABCA6Q8N139 1617 aa21.76■■□□□ 1.07
APP-210ENST00000448850 DUOX2Q9NRD8 1548 aa21.76■■□□□ 1.07
APP-210ENST00000448850 MAGI2Q86UL8 1455 aa21.75■■□□□ 1.07
APP-210ENST00000448850 DIP2CQ9Y2E4 1556 aa21.73■■□□□ 1.07
APP-210ENST00000448850 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
APP-210ENST00000448850 HRCP23327 699 aa21.71■■□□□ 1.07
APP-210ENST00000448850 YEATS2Q9ULM3 1422 aa21.7■■□□□ 1.06
APP-210ENST00000448850 ERBINQ96RT1 1412 aa21.68■■□□□ 1.06
APP-210ENST00000448850 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
APP-210ENST00000448850 A2MP01023 1474 aa21.67■■□□□ 1.06
APP-210ENST00000448850 ARHGEF40Q8TER5 1519 aa21.66■■□□□ 1.06
APP-210ENST00000448850 DHX29Q7Z478 1369 aaKnown RBP21.66■■□□□ 1.06
APP-210ENST00000448850 BCORL1Q5H9F3 1711 aa21.64■■□□□ 1.05
APP-210ENST00000448850 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
APP-210ENST00000448850 ATP10AO60312 1499 aa21.63■■□□□ 1.05
APP-210ENST00000448850 REREQ9P2R6 1566 aa21.63■■□□□ 1.05
APP-210ENST00000448850 UNC13BO14795 1591 aa21.62■■□□□ 1.05
APP-210ENST00000448850 DEPDC5O75140 1603 aa21.6■■□□□ 1.05
APP-210ENST00000448850 RNF17Q9BXT8 1623 aaKnown RBP21.58■■□□□ 1.04
APP-210ENST00000448850 TRIM52Q96A61 297 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms