RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 YEATS2Q9ULM3 1422 aa28.23■■■□□ 2.11
SDCCAG3-206ENST00000446833 TROQ12816 1431 aaPredicted RBP28.22■■■□□ 2.11
SDCCAG3-206ENST00000446833 CLIP1P30622 1438 aa28.19■■■□□ 2.1
SDCCAG3-206ENST00000446833 MYO5CQ9NQX4 1742 aa28.19■■■□□ 2.1
SDCCAG3-206ENST00000446833 KIF14Q15058 1648 aa28.18■■■□□ 2.1
SDCCAG3-206ENST00000446833 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
SDCCAG3-206ENST00000446833 RIMS1Q86UR5 1692 aaKnown RBP28.15■■■□□ 2.1
SDCCAG3-206ENST00000446833 ATP10AO60312 1499 aa28.13■■■□□ 2.09
SDCCAG3-206ENST00000446833 LMTK3Q96Q04 1460 aa28.13■■■□□ 2.09
SDCCAG3-206ENST00000446833 CASKIN1Q8WXD9 1431 aa28.11■■■□□ 2.09
SDCCAG3-206ENST00000446833 ZNF518AQ6AHZ1 1483 aa28.11■■■□□ 2.09
SDCCAG3-206ENST00000446833 SIGLEC1Q9BZZ2 1709 aa28.1■■■□□ 2.09
SDCCAG3-206ENST00000446833 ARHGAP5Q13017 1502 aa28.1■■■□□ 2.09
SDCCAG3-206ENST00000446833 CCDC18Q5T9S5 1454 aa28.09■■■□□ 2.09
SDCCAG3-206ENST00000446833 C9orf84Q5VXU9 1444 aa28.09■■■□□ 2.09
SDCCAG3-206ENST00000446833 MLECQ14165 292 aa28.08■■■□□ 2.09
SDCCAG3-206ENST00000446833 LRRIQ1Q96JM4 1722 aa28.07■■■□□ 2.08
SDCCAG3-206ENST00000446833 AFAP1Q8N556 730 aa28.05■■■□□ 2.08
SDCCAG3-206ENST00000446833 KDM5CP41229 1560 aa28.03■■■□□ 2.08
SDCCAG3-206ENST00000446833 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
SDCCAG3-206ENST00000446833 FER1L4A9Z1Z3 1794 aa28.01■■■□□ 2.07
SDCCAG3-206ENST00000446833 PLPPR3Q6T4P5 718 aa28■■■□□ 2.07
SDCCAG3-206ENST00000446833 FBXO41Q8TF61 875 aa28■■■□□ 2.07
SDCCAG3-206ENST00000446833 CDC42BPBQ9Y5S2 1711 aa27.98■■■□□ 2.07
SDCCAG3-206ENST00000446833 FYCO1Q9BQS8 1478 aa27.98■■■□□ 2.07
SDCCAG3-206ENST00000446833 MYT1LQ9UL68 1186 aa27.97■■■□□ 2.07
SDCCAG3-206ENST00000446833 MLH3Q9UHC1 1453 aa27.96■■■□□ 2.07
SDCCAG3-206ENST00000446833 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
SDCCAG3-206ENST00000446833 HSPA2P54652 639 aa27.95■■■□□ 2.06
SDCCAG3-206ENST00000446833 REREQ9P2R6 1566 aa27.92■■■□□ 2.06
SDCCAG3-206ENST00000446833 ABCC1P33527 1531 aa27.92■■■□□ 2.06
SDCCAG3-206ENST00000446833 DIP2CQ9Y2E4 1556 aa27.9■■■□□ 2.06
SDCCAG3-206ENST00000446833 TRAPPC8Q9Y2L5 1435 aa27.9■■■□□ 2.06
SDCCAG3-206ENST00000446833 CEBPAP49715 358 aaPredicted RBP27.85■■■□□ 2.05
SDCCAG3-206ENST00000446833 ABCA6Q8N139 1617 aa27.85■■■□□ 2.05
SDCCAG3-206ENST00000446833 ITSN2Q9NZM3 1697 aa27.84■■■□□ 2.05
SDCCAG3-206ENST00000446833 CDC42BPAQ5VT25 1732 aa27.84■■■□□ 2.05
SDCCAG3-206ENST00000446833 AGLP35573 1532 aa27.84■■■□□ 2.05
SDCCAG3-206ENST00000446833 GPATCH8Q9UKJ3 1502 aaKnown RBP27.81■■■□□ 2.04
SDCCAG3-206ENST00000446833 PREX1Q8TCU6 1659 aa27.81■■■□□ 2.04
SDCCAG3-206ENST00000446833 SETD1BQ9UPS6 1966 aaKnown RBP27.8■■■□□ 2.04
SDCCAG3-206ENST00000446833 ESF1Q9H501 851 aaKnown RBP27.79■■■□□ 2.04
SDCCAG3-206ENST00000446833 ZNF777Q9ULD5 760 aaPredicted RBP27.79■■■□□ 2.04
SDCCAG3-206ENST00000446833 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
SDCCAG3-206ENST00000446833 UHRF1BP1Q6BDS2 1440 aa27.75■■■□□ 2.03
SDCCAG3-206ENST00000446833 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
SDCCAG3-206ENST00000446833 CFDP1Q9UEE9 299 aaPredicted RBP27.75■■■□□ 2.03
SDCCAG3-206ENST00000446833 KIAA1107Q9UPP5 1409 aa27.75■■■□□ 2.03
SDCCAG3-206ENST00000446833 SPAG9O60271 1321 aaKnown RBP27.73■■■□□ 2.03
SDCCAG3-206ENST00000446833 PLEKHH2Q8IVE3 1493 aa27.73■■■□□ 2.03
SDCCAG3-206ENST00000446833 DMRT2Q9Y5R5 561 aa27.73■■■□□ 2.03
SDCCAG3-206ENST00000446833 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
SDCCAG3-206ENST00000446833 CCNB3Q8WWL7 1395 aa27.73■■■□□ 2.03
SDCCAG3-206ENST00000446833 HNRNPMP52272 730 aaKnown RBP eCLIP27.72■■■□□ 2.03
SDCCAG3-206ENST00000446833 CNTLNQ9NXG0 1405 aa27.72■■■□□ 2.03
SDCCAG3-206ENST00000446833 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
SDCCAG3-206ENST00000446833 CERKQ8TCT0 537 aa27.69■■■□□ 2.02
SDCCAG3-206ENST00000446833 C3P01024 1663 aa27.68■■■□□ 2.02
SDCCAG3-206ENST00000446833 ATP7AQ04656 1500 aa27.62■■■□□ 2.01
SDCCAG3-206ENST00000446833 STRCQ7RTU9 1775 aa27.61■■■□□ 2.01
SDCCAG3-206ENST00000446833 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
SDCCAG3-206ENST00000446833 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
SDCCAG3-206ENST00000446833 INO80Q9ULG1 1556 aaPredicted RBP27.59■■■□□ 2.01
SDCCAG3-206ENST00000446833 NPATQ14207 1427 aa27.58■■■□□ 2.01
SDCCAG3-206ENST00000446833 A2MP01023 1474 aa27.58■■■□□ 2.01
SDCCAG3-206ENST00000446833 ZMYM3Q14202 1370 aa27.57■■■□□ 2
SDCCAG3-206ENST00000446833 PLXNC1O60486 1568 aa27.56■■■□□ 2
SDCCAG3-206ENST00000446833 MROH2AA6NES4 1674 aa27.56■■■□□ 2
SDCCAG3-206ENST00000446833 PTPRTO14522 1441 aa27.56■■■□□ 2
SDCCAG3-206ENST00000446833 TIAM1Q13009 1591 aa27.55■■■□□ 2
SDCCAG3-206ENST00000446833 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
SDCCAG3-206ENST00000446833 ZNF644Q9H582 1327 aaPredicted RBP27.54■■■□□ 2
SDCCAG3-206ENST00000446833 PPP6R1Q9UPN7 881 aa27.54■■■□□ 2
SDCCAG3-206ENST00000446833 MBD5Q9P267 1494 aa27.52■■■□□ 2
SDCCAG3-206ENST00000446833 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
SDCCAG3-206ENST00000446833 GGT6Q6P531 493 aa27.49■■□□□ 1.99
SDCCAG3-206ENST00000446833 NCOA1Q15788 1441 aa27.49■■□□□ 1.99
SDCCAG3-206ENST00000446833 ADGBQ8N7X0 1667 aa27.47■■□□□ 1.99
SDCCAG3-206ENST00000446833 RSPH4AQ5TD94 716 aa27.45■■□□□ 1.98
SDCCAG3-206ENST00000446833 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
SDCCAG3-206ENST00000446833 DHX29Q7Z478 1369 aaKnown RBP27.43■■□□□ 1.98
SDCCAG3-206ENST00000446833 NCOA2Q15596 1464 aa27.43■■□□□ 1.98
SDCCAG3-206ENST00000446833 PTPRKQ15262 1439 aa27.41■■□□□ 1.98
SDCCAG3-206ENST00000446833 CAMSAP1Q5T5Y3 1602 aa27.4■■□□□ 1.98
SDCCAG3-206ENST00000446833 CCDC141Q6ZP82 1450 aa27.39■■□□□ 1.98
SDCCAG3-206ENST00000446833 CAMSAP2Q08AD1 1489 aa27.36■■□□□ 1.97
SDCCAG3-206ENST00000446833 PKD2Q13563 968 aa27.35■■□□□ 1.97
SDCCAG3-206ENST00000446833 PLA2R1Q13018 1463 aa27.34■■□□□ 1.97
SDCCAG3-206ENST00000446833 LTBP4Q8N2S1 1624 aa27.34■■□□□ 1.97
SDCCAG3-206ENST00000446833 MYO3AQ8NEV4 1616 aa27.34■■□□□ 1.97
SDCCAG3-206ENST00000446833 ZNF142P52746 1687 aaPredicted RBP27.33■■□□□ 1.97
SDCCAG3-206ENST00000446833 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.96
SDCCAG3-206ENST00000446833 KIF3BO15066 747 aa27.32■■□□□ 1.96
SDCCAG3-206ENST00000446833 NCKAP5LQ9HCH0 1330 aa27.32■■□□□ 1.96
SDCCAG3-206ENST00000446833 CEP170BQ9Y4F5 1589 aaPredicted RBP27.31■■□□□ 1.96
SDCCAG3-206ENST00000446833 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
SDCCAG3-206ENST00000446833 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
SDCCAG3-206ENST00000446833 IQSEC2Q5JU85 1478 aa27.31■■□□□ 1.96
SDCCAG3-206ENST00000446833 FAM135AQ9P2D6 1515 aa27.3■■□□□ 1.96
SDCCAG3-206ENST00000446833 LRRC9Q6ZRR7 1453 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms