RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 PLCH2O75038 1416 aa39.59■■■■□ 3.93
NUP50-211ENST00000445721 ATP1B4Q9UN42 357 aaPredicted RBP39.57■■■■□ 3.93
NUP50-211ENST00000445721 CERKQ8TCT0 537 aa39.54■■■■□ 3.92
NUP50-211ENST00000445721 FER1L4A9Z1Z3 1794 aa39.52■■■■□ 3.92
NUP50-211ENST00000445721 EFCAB2Q5VUJ9 269 aa39.51■■■■□ 3.92
NUP50-211ENST00000445721 ATP10AO60312 1499 aa39.49■■■■□ 3.91
NUP50-211ENST00000445721 EHMT2Q96KQ7 1210 aa39.46■■■■□ 3.91
NUP50-211ENST00000445721 C9orf84Q5VXU9 1444 aa39.44■■■■□ 3.9
NUP50-211ENST00000445721 ARHGEF12Q9NZN5 1544 aa39.42■■■■□ 3.9
NUP50-211ENST00000445721 CEBPAP49715 358 aaPredicted RBP39.42■■■■□ 3.9
NUP50-211ENST00000445721 CDK11AQ9UQ88 783 aaPredicted RBP39.42■■■■□ 3.9
NUP50-211ENST00000445721 UBTFP17480 764 aaKnown RBP39.41■■■■□ 3.9
NUP50-211ENST00000445721 FMN1Q68DA7 1419 aa39.39■■■■□ 3.9
NUP50-211ENST00000445721 MYO5CQ9NQX4 1742 aa39.37■■■■□ 3.89
NUP50-211ENST00000445721 AFAP1Q8N556 730 aa39.33■■■■□ 3.89
NUP50-211ENST00000445721 MYT1LQ9UL68 1186 aa39.32■■■■□ 3.89
NUP50-211ENST00000445721 PREX1Q8TCU6 1659 aa39.3■■■■□ 3.88
NUP50-211ENST00000445721 ZNF518AQ6AHZ1 1483 aa39.3■■■■□ 3.88
NUP50-211ENST00000445721 KIF14Q15058 1648 aa39.29■■■■□ 3.88
NUP50-211ENST00000445721 ARHGAP5Q13017 1502 aa39.27■■■■□ 3.88
NUP50-211ENST00000445721 ARHGAP35Q9NRY4 1499 aa39.27■■■■□ 3.88
NUP50-211ENST00000445721 TROQ12816 1431 aaPredicted RBP39.25■■■■□ 3.87
NUP50-211ENST00000445721 DMRT2Q9Y5R5 561 aa39.25■■■■□ 3.87
NUP50-211ENST00000445721 CLIP1P30622 1438 aa39.21■■■■□ 3.87
NUP50-211ENST00000445721 UHRF1BP1Q6BDS2 1440 aa39.2■■■■□ 3.87
NUP50-211ENST00000445721 KDM5CP41229 1560 aa39.2■■■■□ 3.87
NUP50-211ENST00000445721 SETD1BQ9UPS6 1966 aaKnown RBP39.16■■■■□ 3.86
NUP50-211ENST00000445721 STRCQ7RTU9 1775 aa39.15■■■■□ 3.86
NUP50-211ENST00000445721 DIP2CQ9Y2E4 1556 aa39.13■■■■□ 3.85
NUP50-211ENST00000445721 ESF1Q9H501 851 aaKnown RBP39.1■■■■□ 3.85
NUP50-211ENST00000445721 MLH3Q9UHC1 1453 aa39.07■■■■□ 3.85
NUP50-211ENST00000445721 REREQ9P2R6 1566 aa39.06■■■■□ 3.84
NUP50-211ENST00000445721 CDC42BPBQ9Y5S2 1711 aa39.05■■■■□ 3.84
NUP50-211ENST00000445721 ABCA6Q8N139 1617 aa39.04■■■■□ 3.84
NUP50-211ENST00000445721 LRRIQ1Q96JM4 1722 aa39.04■■■■□ 3.84
NUP50-211ENST00000445721 DISP3Q9P2K9 1392 aa39.04■■■■□ 3.84
NUP50-211ENST00000445721 TRAPPC8Q9Y2L5 1435 aa39.04■■■■□ 3.84
NUP50-211ENST00000445721 C3P01024 1663 aa39■■■■□ 3.83
NUP50-211ENST00000445721 PTPRTO14522 1441 aa38.98■■■■□ 3.83
NUP50-211ENST00000445721 AGLP35573 1532 aa38.98■■■■□ 3.83
NUP50-211ENST00000445721 ABCC1P33527 1531 aa38.96■■■■□ 3.83
NUP50-211ENST00000445721 ILDR2Q71H61 639 aa38.96■■■■□ 3.83
NUP50-211ENST00000445721 PREX2Q70Z35 1606 aa38.95■■■■□ 3.83
NUP50-211ENST00000445721 ITSN2Q9NZM3 1697 aa38.9■■■■□ 3.82
NUP50-211ENST00000445721 CASKIN1Q8WXD9 1431 aa38.89■■■■□ 3.82
NUP50-211ENST00000445721 CCDC18Q5T9S5 1454 aa38.89■■■■□ 3.82
NUP50-211ENST00000445721 CNTLNQ9NXG0 1405 aa38.87■■■■□ 3.81
NUP50-211ENST00000445721 KIDINS220Q9ULH0 1771 aa38.86■■■■□ 3.81
NUP50-211ENST00000445721 CHIC1Q5VXU3 224 aa38.86■■■■□ 3.81
NUP50-211ENST00000445721 ZNF777Q9ULD5 760 aaPredicted RBP38.85■■■■□ 3.81
NUP50-211ENST00000445721 NCOA1Q15788 1441 aa38.81■■■■□ 3.8
NUP50-211ENST00000445721 SOCS7O14512 581 aa38.8■■■■□ 3.8
NUP50-211ENST00000445721 LTBP4Q8N2S1 1624 aa38.8■■■■□ 3.8
NUP50-211ENST00000445721 CDC42BPAQ5VT25 1732 aa38.79■■■■□ 3.8
NUP50-211ENST00000445721 SAMD9LQ8IVG5 1584 aa38.75■■■■□ 3.79
NUP50-211ENST00000445721 SPAG9O60271 1321 aaKnown RBP38.75■■■■□ 3.79
NUP50-211ENST00000445721 ZMYM3Q14202 1370 aa38.74■■■■□ 3.79
NUP50-211ENST00000445721 HNRNPMP52272 730 aaKnown RBP eCLIP38.74■■■■□ 3.79
NUP50-211ENST00000445721 NPATQ14207 1427 aa38.73■■■■□ 3.79
NUP50-211ENST00000445721 CAMSAP1Q5T5Y3 1602 aa38.71■■■■□ 3.79
NUP50-211ENST00000445721 IQSEC2Q5JU85 1478 aa38.68■■■■□ 3.78
NUP50-211ENST00000445721 SYCP2Q9BX26 1530 aa38.68■■■■□ 3.78
NUP50-211ENST00000445721 NCKAP5LQ9HCH0 1330 aa38.67■■■■□ 3.78
NUP50-211ENST00000445721 SPATA31D1Q6ZQQ2 1576 aa38.67■■■■□ 3.78
NUP50-211ENST00000445721 GPATCH8Q9UKJ3 1502 aaKnown RBP38.67■■■■□ 3.78
NUP50-211ENST00000445721 FYCO1Q9BQS8 1478 aa38.66■■■■□ 3.78
NUP50-211ENST00000445721 MROH2AA6NES4 1674 aa38.66■■■■□ 3.78
NUP50-211ENST00000445721 SUPT6HQ7KZ85 1726 aaKnown RBP38.64■■■■□ 3.78
NUP50-211ENST00000445721 CFDP1Q9UEE9 299 aaPredicted RBP38.61■■■■□ 3.77
NUP50-211ENST00000445721 ZNF335Q9H4Z2 1342 aaPredicted RBP38.59■■■■□ 3.77
NUP50-211ENST00000445721 ATP7AQ04656 1500 aa38.58■■■■□ 3.77
NUP50-211ENST00000445721 GGT6Q6P531 493 aa38.57■■■■□ 3.76
NUP50-211ENST00000445721 KIAA1107Q9UPP5 1409 aa38.56■■■■□ 3.76
NUP50-211ENST00000445721 A2MP01023 1474 aa38.55■■■■□ 3.76
NUP50-211ENST00000445721 CLTCQ00610 1675 aaKnown RBP38.55■■■■□ 3.76
NUP50-211ENST00000445721 PKD2Q13563 968 aa38.54■■■■□ 3.76
NUP50-211ENST00000445721 PLEKHH2Q8IVE3 1493 aa38.54■■■■□ 3.76
NUP50-211ENST00000445721 UBAP1LF5GYI3 381 aa38.53■■■■□ 3.76
NUP50-211ENST00000445721 CCNB3Q8WWL7 1395 aa38.53■■■■□ 3.76
NUP50-211ENST00000445721 PTPRKQ15262 1439 aa38.51■■■■□ 3.76
NUP50-211ENST00000445721 PLXNC1O60486 1568 aa38.49■■■■□ 3.75
NUP50-211ENST00000445721 INO80Q9ULG1 1556 aaPredicted RBP38.48■■■■□ 3.75
NUP50-211ENST00000445721 MYO3AQ8NEV4 1616 aa38.47■■■■□ 3.75
NUP50-211ENST00000445721 PLA2R1Q13018 1463 aa38.47■■■■□ 3.75
NUP50-211ENST00000445721 CEP170BQ9Y4F5 1589 aaPredicted RBP38.44■■■■□ 3.74
NUP50-211ENST00000445721 ZNF142P52746 1687 aaPredicted RBP38.44■■■■□ 3.74
NUP50-211ENST00000445721 PPP6R1Q9UPN7 881 aa38.43■■■■□ 3.74
NUP50-211ENST00000445721 TCOF1Q13428 1488 aaKnown RBP38.42■■■■□ 3.74
NUP50-211ENST00000445721 MTUS2Q5JR59 1369 aa38.42■■■■□ 3.74
NUP50-211ENST00000445721 ZNF644Q9H582 1327 aaPredicted RBP38.39■■■■□ 3.74
NUP50-211ENST00000445721 ADGBQ8N7X0 1667 aa38.33■■■■□ 3.73
NUP50-211ENST00000445721 A2ML1A8K2U0 1454 aa38.3■■■■□ 3.72
NUP50-211ENST00000445721 MBD5Q9P267 1494 aa38.27■■■■□ 3.72
NUP50-211ENST00000445721 DHX29Q7Z478 1369 aaKnown RBP38.25■■■■□ 3.71
NUP50-211ENST00000445721 DNMT1P26358 1616 aaKnown RBP38.24■■■■□ 3.71
NUP50-211ENST00000445721 TIAM1Q13009 1591 aa38.24■■■■□ 3.71
NUP50-211ENST00000445721 FBXO31Q5XUX0 539 aaPredicted RBP38.24■■■■□ 3.71
NUP50-211ENST00000445721 RTEL1-TNFRSF6BF6WH68 1400 aa38.23■■■■□ 3.71
NUP50-211ENST00000445721 SCAF1Q9H7N4 1312 aaKnown RBP38.22■■■■□ 3.71
NUP50-211ENST00000445721 KIF3BO15066 747 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms