RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
AC003001.1-201ENST00000443247 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
AC003001.1-201ENST00000443247 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
AC003001.1-201ENST00000443247 GTPBP6O43824 516 aaPredicted RBP11.88□□□□□ -0.51
AC003001.1-201ENST00000443247 PPP1R37O75864 691 aa11.86□□□□□ -0.51
AC003001.1-201ENST00000443247 EMP3P54852 163 aa11.83□□□□□ -0.52
AC003001.1-201ENST00000443247 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
AC003001.1-201ENST00000443247 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
AC003001.1-201ENST00000443247 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
AC003001.1-201ENST00000443247 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
AC003001.1-201ENST00000443247 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
AC003001.1-201ENST00000443247 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
AC003001.1-201ENST00000443247 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
AC003001.1-201ENST00000443247 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
AC003001.1-201ENST00000443247 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
AC003001.1-201ENST00000443247 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
AC003001.1-201ENST00000443247 TMEM92Q6UXU6 159 aa11.76□□□□□ -0.53
AC003001.1-201ENST00000443247 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
AC003001.1-201ENST00000443247 KRTAP3-2Q9BYR7 98 aa11.74□□□□□ -0.53
AC003001.1-201ENST00000443247 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
AC003001.1-201ENST00000443247 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
AC003001.1-201ENST00000443247 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
AC003001.1-201ENST00000443247 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
AC003001.1-201ENST00000443247 KIF3CO14782 793 aa11.66□□□□□ -0.54
AC003001.1-201ENST00000443247 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
AC003001.1-201ENST00000443247 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
AC003001.1-201ENST00000443247 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
AC003001.1-201ENST00000443247 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
AC003001.1-201ENST00000443247 ERBB3P21860 1342 aa11.6□□□□□ -0.55
AC003001.1-201ENST00000443247 TSHZ2Q9NRE2 1034 aa11.59□□□□□ -0.55
AC003001.1-201ENST00000443247 CRISPLD2Q9H0B8 497 aa11.57□□□□□ -0.56
AC003001.1-201ENST00000443247 ZSWIM6Q9HCJ5 1215 aa11.57□□□□□ -0.56
AC003001.1-201ENST00000443247 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
AC003001.1-201ENST00000443247 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
AC003001.1-201ENST00000443247 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
AC003001.1-201ENST00000443247 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
AC003001.1-201ENST00000443247 VARS2Q5ST30 1063 aaKnown RBP11.55□□□□□ -0.56
AC003001.1-201ENST00000443247 PDE4AP27815 886 aa11.54□□□□□ -0.56
AC003001.1-201ENST00000443247 FOXK1P85037 733 aa11.53□□□□□ -0.56
AC003001.1-201ENST00000443247 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
AC003001.1-201ENST00000443247 DSG2Q14126 1118 aa11.5□□□□□ -0.57
AC003001.1-201ENST00000443247 SLC34A2O95436 690 aa11.49□□□□□ -0.57
AC003001.1-201ENST00000443247 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
AC003001.1-201ENST00000443247 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
AC003001.1-201ENST00000443247 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
AC003001.1-201ENST00000443247 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
AC003001.1-201ENST00000443247 MFSD10Q14728 455 aa11.47□□□□□ -0.57
AC003001.1-201ENST00000443247 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
AC003001.1-201ENST00000443247 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
AC003001.1-201ENST00000443247 PCDHGA4Q9Y5G9 962 aa11.42□□□□□ -0.58
AC003001.1-201ENST00000443247 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
AC003001.1-201ENST00000443247 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
AC003001.1-201ENST00000443247 ZNF316A6NFI3 1004 aaPredicted RBP11.39□□□□□ -0.59
AC003001.1-201ENST00000443247 NUDT7P0C024 238 aa11.37□□□□□ -0.59
AC003001.1-201ENST00000443247 TBC1D12O60347 775 aa11.36□□□□□ -0.59
AC003001.1-201ENST00000443247 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
AC003001.1-201ENST00000443247 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
AC003001.1-201ENST00000443247 OXER1Q8TDS5 423 aa11.34□□□□□ -0.59
AC003001.1-201ENST00000443247 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
AC003001.1-201ENST00000443247 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
AC003001.1-201ENST00000443247 CAMK2BQ13554 666 aa11.32□□□□□ -0.6
AC003001.1-201ENST00000443247 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
AC003001.1-201ENST00000443247 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
AC003001.1-201ENST00000443247 E2F4Q16254 413 aa11.31□□□□□ -0.6
AC003001.1-201ENST00000443247 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
AC003001.1-201ENST00000443247 LHX6Q9UPM6 363 aa11.3□□□□□ -0.6
AC003001.1-201ENST00000443247 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
AC003001.1-201ENST00000443247 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
AC003001.1-201ENST00000443247 LSM11P83369 360 aaKnown RBP eCLIP11.27□□□□□ -0.61
AC003001.1-201ENST00000443247 PTGER2P43116 358 aa11.26□□□□□ -0.61
AC003001.1-201ENST00000443247 PSDA5PKW4 1024 aaPredicted RBP11.25□□□□□ -0.61
AC003001.1-201ENST00000443247 DPYSL4O14531 572 aa11.25□□□□□ -0.61
AC003001.1-201ENST00000443247 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
AC003001.1-201ENST00000443247 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
AC003001.1-201ENST00000443247 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
AC003001.1-201ENST00000443247 PBX2P40425 430 aa11.22□□□□□ -0.61
AC003001.1-201ENST00000443247 AXIN2Q9Y2T1 843 aa11.22□□□□□ -0.61
AC003001.1-201ENST00000443247 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
AC003001.1-201ENST00000443247 EVI5O60447 810 aa11.2□□□□□ -0.62
AC003001.1-201ENST00000443247 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
AC003001.1-201ENST00000443247 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
AC003001.1-201ENST00000443247 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
AC003001.1-201ENST00000443247 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
AC003001.1-201ENST00000443247 PDIA6Q15084 440 aa11.15□□□□□ -0.62
AC003001.1-201ENST00000443247 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
AC003001.1-201ENST00000443247 FOSBP53539 338 aa11.12□□□□□ -0.63
AC003001.1-201ENST00000443247 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
AC003001.1-201ENST00000443247 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
AC003001.1-201ENST00000443247 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
AC003001.1-201ENST00000443247 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
AC003001.1-201ENST00000443247 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
AC003001.1-201ENST00000443247 PSEN2P49810 448 aa11.07□□□□□ -0.64
AC003001.1-201ENST00000443247 DDX12PQ92771 950 aa11.07□□□□□ -0.64
AC003001.1-201ENST00000443247 ZDHHC16Q969W1 377 aa11.06□□□□□ -0.64
AC003001.1-201ENST00000443247 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
AC003001.1-201ENST00000443247 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
AC003001.1-201ENST00000443247 PHF14O94880 888 aa11.04□□□□□ -0.64
AC003001.1-201ENST00000443247 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
AC003001.1-201ENST00000443247 TK2O00142 265 aa11.03□□□□□ -0.64
AC003001.1-201ENST00000443247 HRO43593 1189 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms