RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 MYT1LQ9UL68 1186 aa14.02□□□□□ -0.16
USP6NL-203ENST00000443016 MYO5CQ9NQX4 1742 aa14.02□□□□□ -0.17
USP6NL-203ENST00000443016 LRRIQ1Q96JM4 1722 aa14.02□□□□□ -0.17
USP6NL-203ENST00000443016 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
USP6NL-203ENST00000443016 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
USP6NL-203ENST00000443016 ARHGEF40Q8TER5 1519 aa13.99□□□□□ -0.17
USP6NL-203ENST00000443016 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
USP6NL-203ENST00000443016 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
USP6NL-203ENST00000443016 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
USP6NL-203ENST00000443016 ZFYVE16Q7Z3T8 1539 aa13.98□□□□□ -0.17
USP6NL-203ENST00000443016 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
USP6NL-203ENST00000443016 ZMYM4Q5VZL5 1548 aa13.97□□□□□ -0.17
USP6NL-203ENST00000443016 MLECQ14165 292 aa13.97□□□□□ -0.17
USP6NL-203ENST00000443016 ZNF777Q9ULD5 760 aaPredicted RBP13.97□□□□□ -0.17
USP6NL-203ENST00000443016 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
USP6NL-203ENST00000443016 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
USP6NL-203ENST00000443016 ZNF518AQ6AHZ1 1483 aa13.96□□□□□ -0.18
USP6NL-203ENST00000443016 PTPRMP28827 1452 aa13.94□□□□□ -0.18
USP6NL-203ENST00000443016 KCNA4P22459 653 aa13.93□□□□□ -0.18
USP6NL-203ENST00000443016 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
USP6NL-203ENST00000443016 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
USP6NL-203ENST00000443016 HECW2Q9P2P5 1572 aa13.92□□□□□ -0.18
USP6NL-203ENST00000443016 CDC42BPBQ9Y5S2 1711 aa13.92□□□□□ -0.18
USP6NL-203ENST00000443016 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
USP6NL-203ENST00000443016 ATP10AO60312 1499 aa13.92□□□□□ -0.18
USP6NL-203ENST00000443016 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
USP6NL-203ENST00000443016 MADDQ8WXG6 1647 aa13.91□□□□□ -0.18
USP6NL-203ENST00000443016 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
USP6NL-203ENST00000443016 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.18
USP6NL-203ENST00000443016 GPATCH8Q9UKJ3 1502 aaKnown RBP13.89□□□□□ -0.19
USP6NL-203ENST00000443016 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
USP6NL-203ENST00000443016 ABCC1P33527 1531 aa13.88□□□□□ -0.19
USP6NL-203ENST00000443016 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
USP6NL-203ENST00000443016 KDM5CP41229 1560 aa13.87□□□□□ -0.19
USP6NL-203ENST00000443016 ARHGEF12Q9NZN5 1544 aa13.87□□□□□ -0.19
USP6NL-203ENST00000443016 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.194e-6■■□□□ 11.6
USP6NL-203ENST00000443016 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
USP6NL-203ENST00000443016 MLH3Q9UHC1 1453 aa13.86□□□□□ -0.19
USP6NL-203ENST00000443016 SIGLEC1Q9BZZ2 1709 aa13.85□□□□□ -0.19
USP6NL-203ENST00000443016 ESF1Q9H501 851 aaKnown RBP13.85□□□□□ -0.19
USP6NL-203ENST00000443016 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
USP6NL-203ENST00000443016 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
USP6NL-203ENST00000443016 SYCP2Q9BX26 1530 aa13.83□□□□□ -0.19
USP6NL-203ENST00000443016 ITSN2Q9NZM3 1697 aa13.83□□□□□ -0.2
USP6NL-203ENST00000443016 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
USP6NL-203ENST00000443016 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
USP6NL-203ENST00000443016 DIP2CQ9Y2E4 1556 aa13.82□□□□□ -0.2
USP6NL-203ENST00000443016 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
USP6NL-203ENST00000443016 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
USP6NL-203ENST00000443016 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
USP6NL-203ENST00000443016 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-203ENST00000443016 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
USP6NL-203ENST00000443016 CEBPAP49715 358 aaPredicted RBP13.8□□□□□ -0.2
USP6NL-203ENST00000443016 TIAM1Q13009 1591 aa13.78□□□□□ -0.2
USP6NL-203ENST00000443016 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
USP6NL-203ENST00000443016 KIDINS220Q9ULH0 1771 aa13.78□□□□□ -0.2
USP6NL-203ENST00000443016 HSPA2P54652 639 aa13.78□□□□□ -0.2
USP6NL-203ENST00000443016 APLP2Q06481 763 aa13.78□□□□□ -0.2
USP6NL-203ENST00000443016 REREQ9P2R6 1566 aa13.77□□□□□ -0.2
USP6NL-203ENST00000443016 LMTK3Q96Q04 1460 aa13.77□□□□□ -0.2
USP6NL-203ENST00000443016 SUPT6HQ7KZ85 1726 aaKnown RBP13.76□□□□□ -0.21
USP6NL-203ENST00000443016 AGLP35573 1532 aa13.75□□□□□ -0.21
USP6NL-203ENST00000443016 ATP7AQ04656 1500 aa13.75□□□□□ -0.21
USP6NL-203ENST00000443016 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
USP6NL-203ENST00000443016 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-203ENST00000443016 GGT6Q6P531 493 aa13.73□□□□□ -0.21
USP6NL-203ENST00000443016 A2MP01023 1474 aa13.72□□□□□ -0.21
USP6NL-203ENST00000443016 MBD5Q9P267 1494 aa13.72□□□□□ -0.21
USP6NL-203ENST00000443016 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
USP6NL-203ENST00000443016 TSPY4P0CV99 314 aa13.71□□□□□ -0.21
USP6NL-203ENST00000443016 TSPY10P0CW01 314 aa13.71□□□□□ -0.21
USP6NL-203ENST00000443016 CAMSAP2Q08AD1 1489 aa13.71□□□□□ -0.22
USP6NL-203ENST00000443016 INO80Q9ULG1 1556 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-203ENST00000443016 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
USP6NL-203ENST00000443016 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-203ENST00000443016 UHRF1BP1Q6BDS2 1440 aa13.69□□□□□ -0.22
USP6NL-203ENST00000443016 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
USP6NL-203ENST00000443016 RTEL1-TNFRSF6BF6WH68 1400 aa13.68□□□□□ -0.22
USP6NL-203ENST00000443016 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
USP6NL-203ENST00000443016 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-203ENST00000443016 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
USP6NL-203ENST00000443016 PREX1Q8TCU6 1659 aa13.66□□□□□ -0.22
USP6NL-203ENST00000443016 SETD1BQ9UPS6 1966 aaKnown RBP13.66□□□□□ -0.22
USP6NL-203ENST00000443016 KIF3BO15066 747 aa13.66□□□□□ -0.22
USP6NL-203ENST00000443016 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
USP6NL-203ENST00000443016 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
USP6NL-203ENST00000443016 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
USP6NL-203ENST00000443016 C3P01024 1663 aa13.65□□□□□ -0.22
USP6NL-203ENST00000443016 ADGBQ8N7X0 1667 aa13.65□□□□□ -0.22
USP6NL-203ENST00000443016 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
USP6NL-203ENST00000443016 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
USP6NL-203ENST00000443016 MIA2Q96PC5 1412 aa13.63□□□□□ -0.23
USP6NL-203ENST00000443016 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
USP6NL-203ENST00000443016 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
USP6NL-203ENST00000443016 CLTCQ00610 1675 aaKnown RBP13.6□□□□□ -0.23
USP6NL-203ENST00000443016 WASHC2CQ9Y4E1 1318 aa13.6□□□□□ -0.23
USP6NL-203ENST00000443016 NPATQ14207 1427 aa13.6□□□□□ -0.23
USP6NL-203ENST00000443016 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
USP6NL-203ENST00000443016 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
USP6NL-203ENST00000443016 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 505.6 ms