RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 EFCAB2Q5VUJ9 269 aa35.54■■■■□ 3.28
HDLBP-220ENST00000442730 POGZQ7Z3K3 1410 aa35.54■■■■□ 3.28
HDLBP-220ENST00000442730 PREX2Q70Z35 1606 aa35.54■■■■□ 3.28
HDLBP-220ENST00000442730 SCAPERQ9BY12 1400 aa35.53■■■■□ 3.28
HDLBP-220ENST00000442730 CDC42BPBQ9Y5S2 1711 aa35.5■■■■□ 3.27
HDLBP-220ENST00000442730 CDC42BPAQ5VT25 1732 aa35.44■■■■□ 3.26
HDLBP-220ENST00000442730 ZFYVE16Q7Z3T8 1539 aa35.44■■■■□ 3.26
HDLBP-220ENST00000442730 MAGI2Q86UL8 1455 aa35.43■■■■□ 3.26
HDLBP-220ENST00000442730 YEATS2Q9ULM3 1422 aa35.4■■■■□ 3.26
HDLBP-220ENST00000442730 MTUS2Q5JR59 1369 aa35.39■■■■□ 3.26
HDLBP-220ENST00000442730 ABCC1P33527 1531 aa35.39■■■■□ 3.26
HDLBP-220ENST00000442730 EHBP1L1Q8N3D4 1523 aa35.38■■■■□ 3.25
HDLBP-220ENST00000442730 ZNF518AQ6AHZ1 1483 aa35.38■■■■□ 3.25
HDLBP-220ENST00000442730 VPS8Q8N3P4 1428 aa35.38■■■■□ 3.25
HDLBP-220ENST00000442730 KDM5CP41229 1560 aa35.36■■■■□ 3.25
HDLBP-220ENST00000442730 GPATCH8Q9UKJ3 1502 aaKnown RBP35.36■■■■□ 3.25
HDLBP-220ENST00000442730 ARHGEF12Q9NZN5 1544 aa35.32■■■■□ 3.24
HDLBP-220ENST00000442730 ADAMTSL3P82987 1691 aa35.31■■■■□ 3.24
HDLBP-220ENST00000442730 ITSN2Q9NZM3 1697 aa35.3■■■■□ 3.24
HDLBP-220ENST00000442730 BCORL1Q5H9F3 1711 aa35.3■■■■□ 3.24
HDLBP-220ENST00000442730 SIGLEC1Q9BZZ2 1709 aa35.29■■■■□ 3.24
HDLBP-220ENST00000442730 TIAM1Q13009 1591 aa35.28■■■■□ 3.24
HDLBP-220ENST00000442730 SAMD9LQ8IVG5 1584 aa35.28■■■■□ 3.24
HDLBP-220ENST00000442730 CCNB3Q8WWL7 1395 aa35.26■■■■□ 3.24
HDLBP-220ENST00000442730 HECW2Q9P2P5 1572 aa35.26■■■■□ 3.24
HDLBP-220ENST00000442730 AFAP1Q8N556 730 aa35.26■■■■□ 3.24
HDLBP-220ENST00000442730 ARID4BQ4LE39 1312 aaPredicted RBP35.26■■■■□ 3.23
HDLBP-220ENST00000442730 TRAPPC8Q9Y2L5 1435 aa35.25■■■■□ 3.23
HDLBP-220ENST00000442730 ATP10AO60312 1499 aa35.22■■■■□ 3.23
HDLBP-220ENST00000442730 SYCP2Q9BX26 1530 aa35.21■■■■□ 3.23
HDLBP-220ENST00000442730 C9orf84Q5VXU9 1444 aa35.2■■■■□ 3.23
HDLBP-220ENST00000442730 MADDQ8WXG6 1647 aa35.2■■■■□ 3.23
HDLBP-220ENST00000442730 MLH3Q9UHC1 1453 aa35.19■■■■□ 3.22
HDLBP-220ENST00000442730 ZNF777Q9ULD5 760 aaPredicted RBP35.18■■■■□ 3.22
HDLBP-220ENST00000442730 DIP2CQ9Y2E4 1556 aa35.17■■■■□ 3.22
HDLBP-220ENST00000442730 CFDP1Q9UEE9 299 aaPredicted RBP35.17■■■■□ 3.22
HDLBP-220ENST00000442730 SUPT6HQ7KZ85 1726 aaKnown RBP35.15■■■■□ 3.22
HDLBP-220ENST00000442730 ABCA6Q8N139 1617 aa35.15■■■■□ 3.22
HDLBP-220ENST00000442730 PTPRMP28827 1452 aa35.15■■■■□ 3.22
HDLBP-220ENST00000442730 NCOA2Q15596 1464 aa35.15■■■■□ 3.22
HDLBP-220ENST00000442730 PLEKHH2Q8IVE3 1493 aa35.14■■■■□ 3.22
HDLBP-220ENST00000442730 KIAA1107Q9UPP5 1409 aa35.13■■■■□ 3.21
HDLBP-220ENST00000442730 MAP3K1Q13233 1512 aa35.12■■■■□ 3.21
HDLBP-220ENST00000442730 LRRC9Q6ZRR7 1453 aa35.12■■■■□ 3.21
HDLBP-220ENST00000442730 REREQ9P2R6 1566 aa35.1■■■■□ 3.21
HDLBP-220ENST00000442730 KIDINS220Q9ULH0 1771 aa35.08■■■■□ 3.21
HDLBP-220ENST00000442730 RIMS1Q86UR5 1692 aaKnown RBP35.07■■■■□ 3.2
HDLBP-220ENST00000442730 MYT1LQ9UL68 1186 aa35.06■■■■□ 3.2
HDLBP-220ENST00000442730 HNRNPMP52272 730 aaKnown RBP eCLIP35.05■■■■□ 3.2
HDLBP-220ENST00000442730 ZNF644Q9H582 1327 aaPredicted RBP35.02■■■■□ 3.2
HDLBP-220ENST00000442730 INO80Q9ULG1 1556 aaPredicted RBP35■■■■□ 3.19
HDLBP-220ENST00000442730 MLECQ14165 292 aa34.99■■■■□ 3.19
HDLBP-220ENST00000442730 MBD5Q9P267 1494 aa34.98■■■■□ 3.19
HDLBP-220ENST00000442730 FER1L4A9Z1Z3 1794 aa34.98■■■■□ 3.19
HDLBP-220ENST00000442730 ATP7AQ04656 1500 aa34.98■■■■□ 3.19
HDLBP-220ENST00000442730 SPAG9O60271 1321 aaKnown RBP34.98■■■■□ 3.19
HDLBP-220ENST00000442730 KANK4Q5T7N3 995 aaPredicted RBP34.97■■■■□ 3.19
HDLBP-220ENST00000442730 AGLP35573 1532 aa34.96■■■■□ 3.19
HDLBP-220ENST00000442730 CAMSAP2Q08AD1 1489 aa34.95■■■■□ 3.19
HDLBP-220ENST00000442730 PLXNC1O60486 1568 aa34.86■■■■□ 3.17
HDLBP-220ENST00000442730 CCDC141Q6ZP82 1450 aa34.85■■■■□ 3.17
HDLBP-220ENST00000442730 MYOM3Q5VTT5 1437 aa34.81■■■■□ 3.16
HDLBP-220ENST00000442730 ARHGEF5Q12774 1597 aa34.81■■■■□ 3.16
HDLBP-220ENST00000442730 A2MP01023 1474 aa34.8■■■■□ 3.16
HDLBP-220ENST00000442730 APLP2Q06481 763 aa34.8■■■■□ 3.16
HDLBP-220ENST00000442730 RTEL1-TNFRSF6BF6WH68 1400 aa34.8■■■■□ 3.16
HDLBP-220ENST00000442730 ADGBQ8N7X0 1667 aa34.78■■■■□ 3.16
HDLBP-220ENST00000442730 LMTK3Q96Q04 1460 aa34.77■■■■□ 3.16
HDLBP-220ENST00000442730 MIA2Q96PC5 1412 aa34.76■■■■□ 3.16
HDLBP-220ENST00000442730 PLPPR3Q6T4P5 718 aa34.75■■■■□ 3.15
HDLBP-220ENST00000442730 RSPH4AQ5TD94 716 aa34.72■■■■□ 3.15
HDLBP-220ENST00000442730 CNTLNQ9NXG0 1405 aa34.66■■■■□ 3.14
HDLBP-220ENST00000442730 CEBPAP49715 358 aaPredicted RBP34.65■■■■□ 3.14
HDLBP-220ENST00000442730 C3P01024 1663 aa34.64■■■■□ 3.14
HDLBP-220ENST00000442730 MAST1Q9Y2H9 1570 aa34.63■■■■□ 3.13
HDLBP-220ENST00000442730 DHX29Q7Z478 1369 aaKnown RBP34.62■■■■□ 3.13
HDLBP-220ENST00000442730 ESF1Q9H501 851 aaKnown RBP34.61■■■■□ 3.13
HDLBP-220ENST00000442730 MROH2AA6NES4 1674 aa34.6■■■■□ 3.13
HDLBP-220ENST00000442730 PTPN23Q9H3S7 1636 aa34.59■■■■□ 3.13
HDLBP-220ENST00000442730 PREX1Q8TCU6 1659 aa34.59■■■■□ 3.13
HDLBP-220ENST00000442730 FGD6Q6ZV73 1430 aa34.58■■■■□ 3.13
HDLBP-220ENST00000442730 TSPY4P0CV99 314 aa34.57■■■■□ 3.12
HDLBP-220ENST00000442730 TSPY10P0CW01 314 aa34.57■■■■□ 3.12
HDLBP-220ENST00000442730 TCOF1Q13428 1488 aaKnown RBP34.54■■■■□ 3.12
HDLBP-220ENST00000442730 CLTCQ00610 1675 aaKnown RBP34.54■■■■□ 3.12
HDLBP-220ENST00000442730 GGT6Q6P531 493 aa34.51■■■■□ 3.12
HDLBP-220ENST00000442730 CROCC2H7BZ55 1655 aa34.5■■■■□ 3.11
HDLBP-220ENST00000442730 HSPA2P54652 639 aa34.5■■■■□ 3.11
HDLBP-220ENST00000442730 SHANK2Q9UPX8 1470 aa34.5■■■■□ 3.11
HDLBP-220ENST00000442730 ZMYM3Q14202 1370 aa34.48■■■■□ 3.11
HDLBP-220ENST00000442730 ABCC5O15440 1437 aa34.47■■■■□ 3.11
HDLBP-220ENST00000442730 UHRF1BP1Q6BDS2 1440 aa34.47■■■■□ 3.11
HDLBP-220ENST00000442730 DNMT1P26358 1616 aaKnown RBP34.46■■■■□ 3.11
HDLBP-220ENST00000442730 PPP6R1Q9UPN7 881 aa34.46■■■■□ 3.11
HDLBP-220ENST00000442730 NPATQ14207 1427 aa34.45■■■■□ 3.11
HDLBP-220ENST00000442730 KIF3BO15066 747 aa34.44■■■■□ 3.1
HDLBP-220ENST00000442730 DAPK1P53355 1430 aa34.43■■■■□ 3.1
HDLBP-220ENST00000442730 FAM135AQ9P2D6 1515 aa34.43■■■■□ 3.1
HDLBP-220ENST00000442730 SETD1BQ9UPS6 1966 aaKnown RBP34.42■■■■□ 3.1
HDLBP-220ENST00000442730 RNF17Q9BXT8 1623 aaKnown RBP34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms