RNA–Protein interactions for RNA: ENST00000442275.1

LCP1-204, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-204ENST00000442275 SCAPERQ9BY12 1400 aa34.11■■■■□ 3.05
LCP1-204ENST00000442275 ATP1B4Q9UN42 357 aaPredicted RBP34.06■■■■□ 3.04
LCP1-204ENST00000442275 PLCH2O75038 1416 aa34.05■■■■□ 3.04
LCP1-204ENST00000442275 CERKQ8TCT0 537 aa34.02■■■■□ 3.04
LCP1-204ENST00000442275 EHMT2Q96KQ7 1210 aa34.01■■■■□ 3.03
LCP1-204ENST00000442275 ATP10AO60312 1499 aa33.98■■■■□ 3.03
LCP1-204ENST00000442275 MYO5CQ9NQX4 1742 aa33.98■■■■□ 3.03
LCP1-204ENST00000442275 C9orf84Q5VXU9 1444 aa33.96■■■■□ 3.03
LCP1-204ENST00000442275 ARHGEF12Q9NZN5 1544 aa33.96■■■■□ 3.03
LCP1-204ENST00000442275 EFCAB2Q5VUJ9 269 aa33.95■■■■□ 3.03
LCP1-204ENST00000442275 CEBPAP49715 358 aaPredicted RBP33.94■■■■□ 3.02
LCP1-204ENST00000442275 PREX1Q8TCU6 1659 aa33.93■■■■□ 3.02
LCP1-204ENST00000442275 KIF14Q15058 1648 aa33.9■■■■□ 3.02
LCP1-204ENST00000442275 UBTFP17480 764 aaKnown RBP33.88■■■■□ 3.01
LCP1-204ENST00000442275 FMN1Q68DA7 1419 aa33.87■■■■□ 3.01
LCP1-204ENST00000442275 MYT1LQ9UL68 1186 aa33.87■■■■□ 3.01
LCP1-204ENST00000442275 CDK11AQ9UQ88 783 aaPredicted RBP33.86■■■■□ 3.01
LCP1-204ENST00000442275 ARHGAP5Q13017 1502 aa33.84■■■■□ 3.01
LCP1-204ENST00000442275 ZNF518AQ6AHZ1 1483 aa33.84■■■■□ 3.01
LCP1-204ENST00000442275 AFAP1Q8N556 730 aa33.82■■■■□ 3
LCP1-204ENST00000442275 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
LCP1-204ENST00000442275 TROQ12816 1431 aaPredicted RBP33.78■■■■□ 3
LCP1-204ENST00000442275 STRCQ7RTU9 1775 aa33.77■■■■□ 3
LCP1-204ENST00000442275 KDM5CP41229 1560 aa33.77■■■■□ 3
LCP1-204ENST00000442275 UHRF1BP1Q6BDS2 1440 aa33.77■■■■□ 3
LCP1-204ENST00000442275 CLIP1P30622 1438 aa33.75■■■□□ 2.99
LCP1-204ENST00000442275 DIP2CQ9Y2E4 1556 aa33.75■■■□□ 2.99
LCP1-204ENST00000442275 DMRT2Q9Y5R5 561 aa33.73■■■□□ 2.99
LCP1-204ENST00000442275 LRRIQ1Q96JM4 1722 aa33.71■■■□□ 2.99
LCP1-204ENST00000442275 SETD1BQ9UPS6 1966 aaKnown RBP33.69■■■□□ 2.98
LCP1-204ENST00000442275 ABCA6Q8N139 1617 aa33.69■■■□□ 2.98
LCP1-204ENST00000442275 CDC42BPBQ9Y5S2 1711 aa33.68■■■□□ 2.98
LCP1-204ENST00000442275 C3P01024 1663 aa33.66■■■□□ 2.98
LCP1-204ENST00000442275 DISP3Q9P2K9 1392 aa33.65■■■□□ 2.98
LCP1-204ENST00000442275 REREQ9P2R6 1566 aa33.64■■■□□ 2.98
LCP1-204ENST00000442275 ESF1Q9H501 851 aaKnown RBP33.64■■■□□ 2.98
LCP1-204ENST00000442275 MLH3Q9UHC1 1453 aa33.62■■■□□ 2.97
LCP1-204ENST00000442275 TRAPPC8Q9Y2L5 1435 aa33.61■■■□□ 2.97
LCP1-204ENST00000442275 PREX2Q70Z35 1606 aa33.6■■■□□ 2.97
LCP1-204ENST00000442275 ABCC1P33527 1531 aa33.58■■■□□ 2.97
LCP1-204ENST00000442275 ITSN2Q9NZM3 1697 aa33.57■■■□□ 2.96
LCP1-204ENST00000442275 ILDR2Q71H61 639 aa33.56■■■□□ 2.96
LCP1-204ENST00000442275 AGLP35573 1532 aa33.55■■■□□ 2.96
LCP1-204ENST00000442275 PTPRTO14522 1441 aa33.54■■■□□ 2.96
LCP1-204ENST00000442275 KIDINS220Q9ULH0 1771 aa33.51■■■□□ 2.95
LCP1-204ENST00000442275 CCDC18Q5T9S5 1454 aa33.48■■■□□ 2.95
LCP1-204ENST00000442275 CDC42BPAQ5VT25 1732 aa33.47■■■□□ 2.95
LCP1-204ENST00000442275 CASKIN1Q8WXD9 1431 aa33.45■■■□□ 2.95
LCP1-204ENST00000442275 CNTLNQ9NXG0 1405 aa33.45■■■□□ 2.94
LCP1-204ENST00000442275 ZNF777Q9ULD5 760 aaPredicted RBP33.44■■■□□ 2.94
LCP1-204ENST00000442275 LTBP4Q8N2S1 1624 aa33.43■■■□□ 2.94
LCP1-204ENST00000442275 NCOA1Q15788 1441 aa33.43■■■□□ 2.94
LCP1-204ENST00000442275 SOCS7O14512 581 aa33.41■■■□□ 2.94
LCP1-204ENST00000442275 SPATA31D1Q6ZQQ2 1576 aa33.41■■■□□ 2.94
LCP1-204ENST00000442275 SAMD9LQ8IVG5 1584 aa33.39■■■□□ 2.94
LCP1-204ENST00000442275 CHIC1Q5VXU3 224 aa33.38■■■□□ 2.93
LCP1-204ENST00000442275 CAMSAP1Q5T5Y3 1602 aa33.37■■■□□ 2.93
LCP1-204ENST00000442275 SUPT6HQ7KZ85 1726 aaKnown RBP33.36■■■□□ 2.93
LCP1-204ENST00000442275 SYCP2Q9BX26 1530 aa33.35■■■□□ 2.93
LCP1-204ENST00000442275 MROH2AA6NES4 1674 aa33.34■■■□□ 2.93
LCP1-204ENST00000442275 SPAG9O60271 1321 aaKnown RBP33.32■■■□□ 2.93
LCP1-204ENST00000442275 ZMYM3Q14202 1370 aa33.32■■■□□ 2.92
LCP1-204ENST00000442275 NPATQ14207 1427 aa33.31■■■□□ 2.92
LCP1-204ENST00000442275 HNRNPMP52272 730 aaKnown RBP eCLIP33.31■■■□□ 2.92
LCP1-204ENST00000442275 IQSEC2Q5JU85 1478 aa33.31■■■□□ 2.92
LCP1-204ENST00000442275 NCKAP5LQ9HCH0 1330 aa33.29■■■□□ 2.92
LCP1-204ENST00000442275 FYCO1Q9BQS8 1478 aa33.29■■■□□ 2.92
LCP1-204ENST00000442275 CLTCQ00610 1675 aaKnown RBP33.28■■■□□ 2.92
LCP1-204ENST00000442275 GPATCH8Q9UKJ3 1502 aaKnown RBP33.27■■■□□ 2.92
LCP1-204ENST00000442275 ATP7AQ04656 1500 aa33.25■■■□□ 2.91
LCP1-204ENST00000442275 ZNF335Q9H4Z2 1342 aaPredicted RBP33.24■■■□□ 2.91
LCP1-204ENST00000442275 MYO3AQ8NEV4 1616 aa33.21■■■□□ 2.91
LCP1-204ENST00000442275 A2MP01023 1474 aa33.19■■■□□ 2.9
LCP1-204ENST00000442275 INO80Q9ULG1 1556 aaPredicted RBP33.19■■■□□ 2.9
LCP1-204ENST00000442275 GGT6Q6P531 493 aa33.19■■■□□ 2.9
LCP1-204ENST00000442275 CFDP1Q9UEE9 299 aaPredicted RBP33.19■■■□□ 2.9
LCP1-204ENST00000442275 PLXNC1O60486 1568 aa33.18■■■□□ 2.9
LCP1-204ENST00000442275 ZNF142P52746 1687 aaPredicted RBP33.17■■■□□ 2.9
LCP1-204ENST00000442275 UBAP1LF5GYI3 381 aa33.17■■■□□ 2.9
LCP1-204ENST00000442275 PLEKHH2Q8IVE3 1493 aa33.15■■■□□ 2.9
LCP1-204ENST00000442275 CEP170BQ9Y4F5 1589 aaPredicted RBP33.15■■■□□ 2.9
LCP1-204ENST00000442275 PTPRKQ15262 1439 aa33.14■■■□□ 2.9
LCP1-204ENST00000442275 KIAA1107Q9UPP5 1409 aa33.14■■■□□ 2.9
LCP1-204ENST00000442275 CCNB3Q8WWL7 1395 aa33.14■■■□□ 2.9
LCP1-204ENST00000442275 PKD2Q13563 968 aa33.12■■■□□ 2.89
LCP1-204ENST00000442275 PLA2R1Q13018 1463 aa33.12■■■□□ 2.89
LCP1-204ENST00000442275 TCOF1Q13428 1488 aaKnown RBP33.08■■■□□ 2.89
LCP1-204ENST00000442275 ADGBQ8N7X0 1667 aa33.06■■■□□ 2.88
LCP1-204ENST00000442275 MTUS2Q5JR59 1369 aa33.06■■■□□ 2.88
LCP1-204ENST00000442275 PPP6R1Q9UPN7 881 aa33.04■■■□□ 2.88
LCP1-204ENST00000442275 ZNF644Q9H582 1327 aaPredicted RBP33.02■■■□□ 2.88
LCP1-204ENST00000442275 A2ML1A8K2U0 1454 aa32.98■■■□□ 2.87
LCP1-204ENST00000442275 TIAM1Q13009 1591 aa32.97■■■□□ 2.87
LCP1-204ENST00000442275 DNMT1P26358 1616 aaKnown RBP32.97■■■□□ 2.87
LCP1-204ENST00000442275 SCAF1Q9H7N4 1312 aaKnown RBP32.96■■■□□ 2.87
LCP1-204ENST00000442275 MBD5Q9P267 1494 aa32.93■■■□□ 2.86
LCP1-204ENST00000442275 POLR1AO95602 1720 aaPredicted RBP32.9■■■□□ 2.86
LCP1-204ENST00000442275 DHX29Q7Z478 1369 aaKnown RBP32.89■■■□□ 2.86
LCP1-204ENST00000442275 PIP4K2BP78356 416 aa32.89■■■□□ 2.86
LCP1-204ENST00000442275 FBXO31Q5XUX0 539 aaPredicted RBP32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms