RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 ARHGAP5Q13017 1502 aa23.64■■□□□ 1.37
TRAPPC12-210ENST00000441983 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.37
TRAPPC12-210ENST00000441983 CCNB3Q8WWL7 1395 aa23.63■■□□□ 1.37
TRAPPC12-210ENST00000441983 KDM6BO15054 1643 aa23.62■■□□□ 1.37
TRAPPC12-210ENST00000441983 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
TRAPPC12-210ENST00000441983 AKNAQ7Z591 1439 aa23.57■■□□□ 1.36
TRAPPC12-210ENST00000441983 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
TRAPPC12-210ENST00000441983 ABCC1P33527 1531 aa23.55■■□□□ 1.36
TRAPPC12-210ENST00000441983 MYOM3Q5VTT5 1437 aa23.55■■□□□ 1.36
TRAPPC12-210ENST00000441983 PLEKHH2Q8IVE3 1493 aa23.55■■□□□ 1.36
TRAPPC12-210ENST00000441983 MIA2Q96PC5 1412 aa23.54■■□□□ 1.36
TRAPPC12-210ENST00000441983 SAMD9LQ8IVG5 1584 aa23.53■■□□□ 1.36
TRAPPC12-210ENST00000441983 ADGRL1O94910 1474 aa23.53■■□□□ 1.36
TRAPPC12-210ENST00000441983 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
TRAPPC12-210ENST00000441983 KIAA1107Q9UPP5 1409 aa23.5■■□□□ 1.35
TRAPPC12-210ENST00000441983 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
TRAPPC12-210ENST00000441983 DENND4BO75064 1496 aaPredicted RBP23.49■■□□□ 1.35
TRAPPC12-210ENST00000441983 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
TRAPPC12-210ENST00000441983 ZMYM4Q5VZL5 1548 aa23.46■■□□□ 1.35
TRAPPC12-210ENST00000441983 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
TRAPPC12-210ENST00000441983 POGZQ7Z3K3 1410 aa23.46■■□□□ 1.35
TRAPPC12-210ENST00000441983 COL17A1Q9UMD9 1497 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC12-210ENST00000441983 KDM5CP41229 1560 aa23.44■■□□□ 1.34
TRAPPC12-210ENST00000441983 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
TRAPPC12-210ENST00000441983 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
TRAPPC12-210ENST00000441983 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
TRAPPC12-210ENST00000441983 FGD6Q6ZV73 1430 aa23.43■■□□□ 1.34
TRAPPC12-210ENST00000441983 SCAPERQ9BY12 1400 aa23.43■■□□□ 1.34
TRAPPC12-210ENST00000441983 ARHGEF5Q12774 1597 aa23.42■■□□□ 1.34
TRAPPC12-210ENST00000441983 TCOF1Q13428 1488 aaKnown RBP23.42■■□□□ 1.34
TRAPPC12-210ENST00000441983 MAGI2Q86UL8 1455 aa23.4■■□□□ 1.34
TRAPPC12-210ENST00000441983 ARHGEF12Q9NZN5 1544 aa23.39■■□□□ 1.34
TRAPPC12-210ENST00000441983 HECW2Q9P2P5 1572 aa23.37■■□□□ 1.33
TRAPPC12-210ENST00000441983 MBD5Q9P267 1494 aa23.36■■□□□ 1.33
TRAPPC12-210ENST00000441983 ZNF777Q9ULD5 760 aaPredicted RBP23.35■■□□□ 1.33
TRAPPC12-210ENST00000441983 CCDC141Q6ZP82 1450 aa23.35■■□□□ 1.33
TRAPPC12-210ENST00000441983 ARHGEF40Q8TER5 1519 aa23.34■■□□□ 1.33
TRAPPC12-210ENST00000441983 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
TRAPPC12-210ENST00000441983 CROCC2H7BZ55 1655 aa23.33■■□□□ 1.33
TRAPPC12-210ENST00000441983 MLH3Q9UHC1 1453 aa23.33■■□□□ 1.33
TRAPPC12-210ENST00000441983 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.32
TRAPPC12-210ENST00000441983 INO80Q9ULG1 1556 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC12-210ENST00000441983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.32■■□□□ 1.326e-6■■■□□ 18.9
TRAPPC12-210ENST00000441983 TRAPPC8Q9Y2L5 1435 aa23.32■■□□□ 1.32
TRAPPC12-210ENST00000441983 MAST1Q9Y2H9 1570 aa23.31■■□□□ 1.32
TRAPPC12-210ENST00000441983 ZFYVE16Q7Z3T8 1539 aa23.3■■□□□ 1.32
TRAPPC12-210ENST00000441983 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
TRAPPC12-210ENST00000441983 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
TRAPPC12-210ENST00000441983 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
TRAPPC12-210ENST00000441983 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
TRAPPC12-210ENST00000441983 KIDINS220Q9ULH0 1771 aa23.28■■□□□ 1.32
TRAPPC12-210ENST00000441983 RTEL1-TNFRSF6BF6WH68 1400 aa23.27■■□□□ 1.32
TRAPPC12-210ENST00000441983 ATP7AQ04656 1500 aa23.27■■□□□ 1.32
TRAPPC12-210ENST00000441983 REREQ9P2R6 1566 aa23.26■■□□□ 1.31
TRAPPC12-210ENST00000441983 HNRNPMP52272 730 aaKnown RBP eCLIP23.25■■□□□ 1.311e-6■■■■□ 24.3
TRAPPC12-210ENST00000441983 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
TRAPPC12-210ENST00000441983 ABCA6Q8N139 1617 aa23.23■■□□□ 1.31
TRAPPC12-210ENST00000441983 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
TRAPPC12-210ENST00000441983 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
TRAPPC12-210ENST00000441983 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
TRAPPC12-210ENST00000441983 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
TRAPPC12-210ENST00000441983 DAPK1P53355 1430 aa23.21■■□□□ 1.31
TRAPPC12-210ENST00000441983 SPAG9O60271 1321 aaKnown RBP23.2■■□□□ 1.3
TRAPPC12-210ENST00000441983 ABCC5O15440 1437 aa23.18■■□□□ 1.3
TRAPPC12-210ENST00000441983 ATP10AO60312 1499 aa23.17■■□□□ 1.3
TRAPPC12-210ENST00000441983 C9orf84Q5VXU9 1444 aa23.17■■□□□ 1.3
TRAPPC12-210ENST00000441983 YEATS2Q9ULM3 1422 aa23.17■■□□□ 1.3
TRAPPC12-210ENST00000441983 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
TRAPPC12-210ENST00000441983 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
TRAPPC12-210ENST00000441983 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
TRAPPC12-210ENST00000441983 FAM50AQ14320 339 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-210ENST00000441983 AGLP35573 1532 aa23.13■■□□□ 1.29
TRAPPC12-210ENST00000441983 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
TRAPPC12-210ENST00000441983 EIF2AK4Q9P2K8 1649 aaKnown RBP23.09■■□□□ 1.29
TRAPPC12-210ENST00000441983 MYT1LQ9UL68 1186 aa23.08■■□□□ 1.29
TRAPPC12-210ENST00000441983 A2MP01023 1474 aa23.08■■□□□ 1.29
TRAPPC12-210ENST00000441983 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.28
TRAPPC12-210ENST00000441983 SIGLEC1Q9BZZ2 1709 aa23.07■■□□□ 1.28
TRAPPC12-210ENST00000441983 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
TRAPPC12-210ENST00000441983 ANKRD30AQ9BXX3 1397 aa23.06■■□□□ 1.28
TRAPPC12-210ENST00000441983 NCOA1Q15788 1441 aa23.03■■□□□ 1.28
TRAPPC12-210ENST00000441983 DHX29Q7Z478 1369 aaKnown RBP23.02■■□□□ 1.28
TRAPPC12-210ENST00000441983 ERBINQ96RT1 1412 aa23.02■■□□□ 1.28
TRAPPC12-210ENST00000441983 PTPRKQ15262 1439 aa23.01■■□□□ 1.27
TRAPPC12-210ENST00000441983 KIF15Q9NS87 1388 aa23.01■■□□□ 1.27
TRAPPC12-210ENST00000441983 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
TRAPPC12-210ENST00000441983 RNF17Q9BXT8 1623 aaKnown RBP22.99■■□□□ 1.27
TRAPPC12-210ENST00000441983 GCC2Q8IWJ2 1684 aa22.99■■□□□ 1.27
TRAPPC12-210ENST00000441983 ADAMTSL3P82987 1691 aa22.97■■□□□ 1.27
TRAPPC12-210ENST00000441983 DEPDC5O75140 1603 aa22.95■■□□□ 1.26
TRAPPC12-210ENST00000441983 FER1L4A9Z1Z3 1794 aa22.94■■□□□ 1.26
TRAPPC12-210ENST00000441983 ZC3H13Q5T200 1668 aaKnown RBP22.91■■□□□ 1.26
TRAPPC12-210ENST00000441983 ARID4BQ4LE39 1312 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC12-210ENST00000441983 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
TRAPPC12-210ENST00000441983 PRDM15P57071 1507 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC12-210ENST00000441983 HFM1A2PYH4 1435 aa22.9■■□□□ 1.26
TRAPPC12-210ENST00000441983 ANKRD50Q9ULJ7 1429 aa22.9■■□□□ 1.26
TRAPPC12-210ENST00000441983 MROH2AA6NES4 1674 aa22.89■■□□□ 1.25
TRAPPC12-210ENST00000441983 MADDQ8WXG6 1647 aa22.89■■□□□ 1.25
TRAPPC12-210ENST00000441983 RRP7BPQ9NSQ0 103 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms