RNA–Protein interactions for RNA: ENST00000441134.5

GARNL3-207, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-207ENST00000441134 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
GARNL3-207ENST00000441134 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
GARNL3-207ENST00000441134 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
GARNL3-207ENST00000441134 POTEB3A0JP26 581 aa8.97□□□□□ -0.97
GARNL3-207ENST00000441134 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
GARNL3-207ENST00000441134 ZSWIM6Q9HCJ5 1215 aa8.96□□□□□ -0.98
GARNL3-207ENST00000441134 ABCC9O60706 1549 aa8.95□□□□□ -0.98
GARNL3-207ENST00000441134 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
GARNL3-207ENST00000441134 ERBB3P21860 1342 aa8.94□□□□□ -0.98
GARNL3-207ENST00000441134 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
GARNL3-207ENST00000441134 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
GARNL3-207ENST00000441134 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
GARNL3-207ENST00000441134 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
GARNL3-207ENST00000441134 C2orf72A6NCS6 295 aa8.88□□□□□ -0.99
GARNL3-207ENST00000441134 KIF3CO14782 793 aa8.88□□□□□ -0.99
GARNL3-207ENST00000441134 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
GARNL3-207ENST00000441134 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
GARNL3-207ENST00000441134 ARSIQ5FYB1 569 aa8.86□□□□□ -0.99
GARNL3-207ENST00000441134 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
GARNL3-207ENST00000441134 PPP1R37O75864 691 aa8.84□□□□□ -0.99
GARNL3-207ENST00000441134 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
GARNL3-207ENST00000441134 ZNF687Q8N1G0 1237 aa8.81□□□□□ -1
GARNL3-207ENST00000441134 KHSRPQ92945 711 aaKnown RBP eCLIP8.81□□□□□ -1
GARNL3-207ENST00000441134 ZNF316A6NFI3 1004 aaPredicted RBP8.8□□□□□ -1
GARNL3-207ENST00000441134 SLC34A2O95436 690 aa8.79□□□□□ -1
GARNL3-207ENST00000441134 PCDHGA4Q9Y5G9 962 aa8.77□□□□□ -1.01
GARNL3-207ENST00000441134 NUDT7P0C024 238 aa8.76□□□□□ -1.01
GARNL3-207ENST00000441134 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
GARNL3-207ENST00000441134 RYDENQ9NUL5 291 aaKnown RBP8.75□□□□□ -1.01
GARNL3-207ENST00000441134 NKX1-1Q15270 411 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-207ENST00000441134 FOXK1P85037 733 aa8.72□□□□□ -1.01
GARNL3-207ENST00000441134 GPHNQ9NQX3 736 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-207ENST00000441134 PLPP6Q8IY26 295 aa8.71□□□□□ -1.02
GARNL3-207ENST00000441134 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
GARNL3-207ENST00000441134 RNF166Q96A37 237 aaPredicted RBP8.7□□□□□ -1.02
GARNL3-207ENST00000441134 PBX2P40425 430 aa8.69□□□□□ -1.02
GARNL3-207ENST00000441134 PTGER2P43116 358 aa8.69□□□□□ -1.02
GARNL3-207ENST00000441134 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
GARNL3-207ENST00000441134 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
GARNL3-207ENST00000441134 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
GARNL3-207ENST00000441134 DSG2Q14126 1118 aa8.68□□□□□ -1.02
GARNL3-207ENST00000441134 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
GARNL3-207ENST00000441134 PSDA5PKW4 1024 aaPredicted RBP8.67□□□□□ -1.02
GARNL3-207ENST00000441134 TBC1D12O60347 775 aa8.65□□□□□ -1.02
GARNL3-207ENST00000441134 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
GARNL3-207ENST00000441134 KDM4FA0A1W2PPD8 638 aa8.63□□□□□ -1.03
GARNL3-207ENST00000441134 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
GARNL3-207ENST00000441134 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
GARNL3-207ENST00000441134 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
GARNL3-207ENST00000441134 GTPBP6O43824 516 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-207ENST00000441134 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
GARNL3-207ENST00000441134 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
GARNL3-207ENST00000441134 PDE4AP27815 886 aa8.59□□□□□ -1.03
GARNL3-207ENST00000441134 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
GARNL3-207ENST00000441134 OXER1Q8TDS5 423 aa8.58□□□□□ -1.04
GARNL3-207ENST00000441134 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.04
GARNL3-207ENST00000441134 NCKAP5LQ9HCH0 1330 aa8.57□□□□□ -1.04
GARNL3-207ENST00000441134 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
GARNL3-207ENST00000441134 KCNH8Q96L42 1107 aa8.54□□□□□ -1.04
GARNL3-207ENST00000441134 TK2O00142 265 aa8.53□□□□□ -1.04
GARNL3-207ENST00000441134 PSEN2P49810 448 aa8.53□□□□□ -1.04
GARNL3-207ENST00000441134 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
GARNL3-207ENST00000441134 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
GARNL3-207ENST00000441134 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
GARNL3-207ENST00000441134 ZNF454Q8N9F8 522 aa8.51□□□□□ -1.05
GARNL3-207ENST00000441134 MFSD10Q14728 455 aa8.5□□□□□ -1.05
GARNL3-207ENST00000441134 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
GARNL3-207ENST00000441134 HRO43593 1189 aa8.48□□□□□ -1.05
GARNL3-207ENST00000441134 EVI5O60447 810 aa8.47□□□□□ -1.05
GARNL3-207ENST00000441134 FOSBP53539 338 aa8.47□□□□□ -1.05
GARNL3-207ENST00000441134 STAC3Q96MF2 364 aa8.47□□□□□ -1.05
GARNL3-207ENST00000441134 BCL2L12Q9HB09 334 aa8.47□□□□□ -1.05
GARNL3-207ENST00000441134 MAP3K9P80192 1104 aa8.46□□□□□ -1.06
GARNL3-207ENST00000441134 ANO8Q9HCE9 1232 aaPredicted RBP8.46□□□□□ -1.06
GARNL3-207ENST00000441134 JPH4Q96JJ6 628 aa8.45□□□□□ -1.06
GARNL3-207ENST00000441134 HCSTQ9UBK5 93 aa8.45□□□□□ -1.06
GARNL3-207ENST00000441134 PTPREP23469 700 aa8.44□□□□□ -1.06
GARNL3-207ENST00000441134 CADPS2Q86UW7 1296 aa8.44□□□□□ -1.06
GARNL3-207ENST00000441134 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
GARNL3-207ENST00000441134 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-207ENST00000441134 ZDHHC16Q969W1 377 aa8.42□□□□□ -1.06
GARNL3-207ENST00000441134 VPS9D1Q9Y2B5 631 aa8.42□□□□□ -1.06
GARNL3-207ENST00000441134 CCDC180Q9P1Z9 1646 aa8.42□□□□□ -1.06
GARNL3-207ENST00000441134 SLC4A5Q9BY07 1137 aa8.41□□□□□ -1.06
GARNL3-207ENST00000441134 KCTD12Q96CX2 325 aaKnown RBP8.4□□□□□ -1.06
GARNL3-207ENST00000441134 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
GARNL3-207ENST00000441134 AMER1Q5JTC6 1135 aaPredicted RBP8.38□□□□□ -1.07
GARNL3-207ENST00000441134 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
GARNL3-207ENST00000441134 PLA2G2EQ9NZK7 142 aa8.37□□□□□ -1.07
GARNL3-207ENST00000441134 CAMK2BQ13554 666 aa8.36□□□□□ -1.07
GARNL3-207ENST00000441134 FBXW7Q969H0 707 aa8.35□□□□□ -1.07
GARNL3-207ENST00000441134 PCDHGA10Q9Y5H3 936 aa8.35□□□□□ -1.07
GARNL3-207ENST00000441134 PPP1R3GB7ZBB8 358 aa8.34□□□□□ -1.07
GARNL3-207ENST00000441134 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-207ENST00000441134 PHF14O94880 888 aa8.34□□□□□ -1.07
GARNL3-207ENST00000441134 TYW1BQ6NUM6 668 aa8.34□□□□□ -1.07
GARNL3-207ENST00000441134 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-207ENST00000441134 GOLGA8CPA6NN73 597 aa8.33□□□□□ -1.08
GARNL3-207ENST00000441134 DPYSL4O14531 572 aa8.33□□□□□ -1.08
GARNL3-207ENST00000441134 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 433.9 ms