RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 RICTORQ6R327 1708 aa18.52■□□□□ 0.56
AC009404.1-202ENST00000439955 FHOD3Q2V2M9 1422 aa18.51■□□□□ 0.55
AC009404.1-202ENST00000439955 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
AC009404.1-202ENST00000439955 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
AC009404.1-202ENST00000439955 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
AC009404.1-202ENST00000439955 CEBPAP49715 358 aaPredicted RBP18.49■□□□□ 0.55
AC009404.1-202ENST00000439955 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
AC009404.1-202ENST00000439955 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
AC009404.1-202ENST00000439955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
AC009404.1-202ENST00000439955 TTC37Q6PGP7 1564 aa18.44■□□□□ 0.54
AC009404.1-202ENST00000439955 FER1L4A9Z1Z3 1794 aa18.44■□□□□ 0.54
AC009404.1-202ENST00000439955 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
AC009404.1-202ENST00000439955 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
AC009404.1-202ENST00000439955 FOXD1Q16676 465 aa18.42■□□□□ 0.54
AC009404.1-202ENST00000439955 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
AC009404.1-202ENST00000439955 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
AC009404.1-202ENST00000439955 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
AC009404.1-202ENST00000439955 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
AC009404.1-202ENST00000439955 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
AC009404.1-202ENST00000439955 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
AC009404.1-202ENST00000439955 PREX1Q8TCU6 1659 aa18.38■□□□□ 0.53
AC009404.1-202ENST00000439955 ATP10AO60312 1499 aa18.36■□□□□ 0.53
AC009404.1-202ENST00000439955 STRCQ7RTU9 1775 aa18.36■□□□□ 0.53
AC009404.1-202ENST00000439955 C9orf84Q5VXU9 1444 aa18.34■□□□□ 0.53
AC009404.1-202ENST00000439955 UHRF1BP1Q6BDS2 1440 aa18.34■□□□□ 0.53
AC009404.1-202ENST00000439955 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.53
AC009404.1-202ENST00000439955 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
AC009404.1-202ENST00000439955 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
AC009404.1-202ENST00000439955 PLCH2O75038 1416 aa18.31■□□□□ 0.52
AC009404.1-202ENST00000439955 MAP3K1Q13233 1512 aa18.3■□□□□ 0.52
AC009404.1-202ENST00000439955 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
AC009404.1-202ENST00000439955 PTPRTO14522 1441 aa18.27■□□□□ 0.52
AC009404.1-202ENST00000439955 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
AC009404.1-202ENST00000439955 AFAP1Q8N556 730 aa18.26■□□□□ 0.51
AC009404.1-202ENST00000439955 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
AC009404.1-202ENST00000439955 LTBP4Q8N2S1 1624 aa18.25■□□□□ 0.51
AC009404.1-202ENST00000439955 APLP2Q06481 763 aa18.24■□□□□ 0.51
AC009404.1-202ENST00000439955 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
AC009404.1-202ENST00000439955 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
AC009404.1-202ENST00000439955 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
AC009404.1-202ENST00000439955 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
AC009404.1-202ENST00000439955 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
AC009404.1-202ENST00000439955 C3P01024 1663 aa18.18■□□□□ 0.5
AC009404.1-202ENST00000439955 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
AC009404.1-202ENST00000439955 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
AC009404.1-202ENST00000439955 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
AC009404.1-202ENST00000439955 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
AC009404.1-202ENST00000439955 IQSEC2Q5JU85 1478 aa18.16■□□□□ 0.5
AC009404.1-202ENST00000439955 MYO5CQ9NQX4 1742 aa18.16■□□□□ 0.5
AC009404.1-202ENST00000439955 ARHGAP5Q13017 1502 aa18.16■□□□□ 0.5
AC009404.1-202ENST00000439955 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
AC009404.1-202ENST00000439955 KDM5CP41229 1560 aa18.15■□□□□ 0.5
AC009404.1-202ENST00000439955 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
AC009404.1-202ENST00000439955 KIF14Q15058 1648 aa18.15■□□□□ 0.5
AC009404.1-202ENST00000439955 ABCA6Q8N139 1617 aa18.13■□□□□ 0.49
AC009404.1-202ENST00000439955 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
AC009404.1-202ENST00000439955 CAMSAP1Q5T5Y3 1602 aa18.11■□□□□ 0.49
AC009404.1-202ENST00000439955 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
AC009404.1-202ENST00000439955 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
AC009404.1-202ENST00000439955 REREQ9P2R6 1566 aa18.09■□□□□ 0.49
AC009404.1-202ENST00000439955 MLH3Q9UHC1 1453 aa18.08■□□□□ 0.49
AC009404.1-202ENST00000439955 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.48
AC009404.1-202ENST00000439955 AGLP35573 1532 aa18.07■□□□□ 0.48
AC009404.1-202ENST00000439955 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
AC009404.1-202ENST00000439955 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
AC009404.1-202ENST00000439955 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
AC009404.1-202ENST00000439955 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
AC009404.1-202ENST00000439955 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
AC009404.1-202ENST00000439955 HSPA1LP34931 641 aa18.03■□□□□ 0.48
AC009404.1-202ENST00000439955 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
AC009404.1-202ENST00000439955 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
AC009404.1-202ENST00000439955 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
AC009404.1-202ENST00000439955 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.47
AC009404.1-202ENST00000439955 NPATQ14207 1427 aa18.01■□□□□ 0.47
AC009404.1-202ENST00000439955 ABCC1P33527 1531 aa18.01■□□□□ 0.47
AC009404.1-202ENST00000439955 SUPT6HQ7KZ85 1726 aaKnown RBP18■□□□□ 0.47
AC009404.1-202ENST00000439955 CDC42BPBQ9Y5S2 1711 aa17.99■□□□□ 0.47
AC009404.1-202ENST00000439955 MED1Q15648 1581 aaPredicted RBP17.99■□□□□ 0.47
AC009404.1-202ENST00000439955 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
AC009404.1-202ENST00000439955 PKD2Q13563 968 aa17.97■□□□□ 0.47
AC009404.1-202ENST00000439955 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
AC009404.1-202ENST00000439955 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
AC009404.1-202ENST00000439955 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
AC009404.1-202ENST00000439955 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
AC009404.1-202ENST00000439955 PREX2Q70Z35 1606 aa17.94■□□□□ 0.46
AC009404.1-202ENST00000439955 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
AC009404.1-202ENST00000439955 PLA2R1Q13018 1463 aa17.94■□□□□ 0.46
AC009404.1-202ENST00000439955 MROH2AA6NES4 1674 aa17.93■□□□□ 0.46
AC009404.1-202ENST00000439955 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
AC009404.1-202ENST00000439955 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
AC009404.1-202ENST00000439955 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
AC009404.1-202ENST00000439955 GGT6Q6P531 493 aa17.92■□□□□ 0.46
AC009404.1-202ENST00000439955 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
AC009404.1-202ENST00000439955 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
AC009404.1-202ENST00000439955 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
AC009404.1-202ENST00000439955 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
AC009404.1-202ENST00000439955 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
AC009404.1-202ENST00000439955 TOM1O60784 492 aa17.9■□□□□ 0.46
AC009404.1-202ENST00000439955 ZNF142P52746 1687 aaPredicted RBP17.89■□□□□ 0.45
AC009404.1-202ENST00000439955 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms