RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
GARNL3-206ENST00000439286 YEATS2Q9ULM3 1422 aa21.93■■□□□ 1.1
GARNL3-206ENST00000439286 ZMYM4Q5VZL5 1548 aa21.91■■□□□ 1.1
GARNL3-206ENST00000439286 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
GARNL3-206ENST00000439286 KIF14Q15058 1648 aa21.91■■□□□ 1.1
GARNL3-206ENST00000439286 BCORL1Q5H9F3 1711 aa21.9■■□□□ 1.1
GARNL3-206ENST00000439286 RICTORQ6R327 1708 aa21.9■■□□□ 1.1
GARNL3-206ENST00000439286 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
GARNL3-206ENST00000439286 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.09
GARNL3-206ENST00000439286 CCDC18Q5T9S5 1454 aa21.89■■□□□ 1.09
GARNL3-206ENST00000439286 ATP10AO60312 1499 aa21.87■■□□□ 1.09
GARNL3-206ENST00000439286 MADDQ8WXG6 1647 aa21.87■■□□□ 1.09
GARNL3-206ENST00000439286 ZNF518AQ6AHZ1 1483 aa21.85■■□□□ 1.09
GARNL3-206ENST00000439286 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
GARNL3-206ENST00000439286 MYO5CQ9NQX4 1742 aa21.81■■□□□ 1.08
GARNL3-206ENST00000439286 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
GARNL3-206ENST00000439286 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
GARNL3-206ENST00000439286 PCF11O94913 1555 aaKnown RBP21.78■■□□□ 1.08
GARNL3-206ENST00000439286 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
GARNL3-206ENST00000439286 RIMS1Q86UR5 1692 aaKnown RBP21.77■■□□□ 1.08
GARNL3-206ENST00000439286 HSPA2P54652 639 aa21.77■■□□□ 1.08
GARNL3-206ENST00000439286 LMTK3Q96Q04 1460 aa21.76■■□□□ 1.07
GARNL3-206ENST00000439286 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
GARNL3-206ENST00000439286 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
GARNL3-206ENST00000439286 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
GARNL3-206ENST00000439286 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
GARNL3-206ENST00000439286 MLH3Q9UHC1 1453 aa21.71■■□□□ 1.07
GARNL3-206ENST00000439286 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
GARNL3-206ENST00000439286 ARHGEF12Q9NZN5 1544 aa21.7■■□□□ 1.06
GARNL3-206ENST00000439286 KDM5CP41229 1560 aa21.7■■□□□ 1.06
GARNL3-206ENST00000439286 HNRNPMP52272 730 aaKnown RBP eCLIP21.68■■□□□ 1.06
GARNL3-206ENST00000439286 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
GARNL3-206ENST00000439286 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
GARNL3-206ENST00000439286 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
GARNL3-206ENST00000439286 ABCC1P33527 1531 aa21.65■■□□□ 1.06
GARNL3-206ENST00000439286 SIGLEC1Q9BZZ2 1709 aa21.65■■□□□ 1.06
GARNL3-206ENST00000439286 PREX2Q70Z35 1606 aa21.65■■□□□ 1.06
GARNL3-206ENST00000439286 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
GARNL3-206ENST00000439286 DIP2CQ9Y2E4 1556 aa21.62■■□□□ 1.05
GARNL3-206ENST00000439286 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
GARNL3-206ENST00000439286 FER1L4A9Z1Z3 1794 aa21.61■■□□□ 1.05
GARNL3-206ENST00000439286 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
GARNL3-206ENST00000439286 DMRT2Q9Y5R5 561 aa21.61■■□□□ 1.05
GARNL3-206ENST00000439286 KIAA1107Q9UPP5 1409 aa21.6■■□□□ 1.05
GARNL3-206ENST00000439286 REREQ9P2R6 1566 aa21.6■■□□□ 1.05
GARNL3-206ENST00000439286 UHRF1BP1Q6BDS2 1440 aa21.59■■□□□ 1.05
GARNL3-206ENST00000439286 AGLP35573 1532 aa21.59■■□□□ 1.05
GARNL3-206ENST00000439286 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
GARNL3-206ENST00000439286 CNTLNQ9NXG0 1405 aa21.56■■□□□ 1.04
GARNL3-206ENST00000439286 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
GARNL3-206ENST00000439286 SYCP2Q9BX26 1530 aa21.55■■□□□ 1.04
GARNL3-206ENST00000439286 ITSN2Q9NZM3 1697 aa21.54■■□□□ 1.04
GARNL3-206ENST00000439286 SAMD9LQ8IVG5 1584 aa21.53■■□□□ 1.04
GARNL3-206ENST00000439286 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.04
GARNL3-206ENST00000439286 CERKQ8TCT0 537 aa21.52■■□□□ 1.04
GARNL3-206ENST00000439286 GGT6Q6P531 493 aa21.51■■□□□ 1.03
GARNL3-206ENST00000439286 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
GARNL3-206ENST00000439286 EHBP1L1Q8N3D4 1523 aa21.49■■□□□ 1.03
GARNL3-206ENST00000439286 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
GARNL3-206ENST00000439286 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
GARNL3-206ENST00000439286 A2MP01023 1474 aa21.47■■□□□ 1.03
GARNL3-206ENST00000439286 RSPH4AQ5TD94 716 aa21.47■■□□□ 1.03
GARNL3-206ENST00000439286 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
GARNL3-206ENST00000439286 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
GARNL3-206ENST00000439286 ATP7AQ04656 1500 aa21.46■■□□□ 1.03
GARNL3-206ENST00000439286 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
GARNL3-206ENST00000439286 NPATQ14207 1427 aa21.41■■□□□ 1.02
GARNL3-206ENST00000439286 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
GARNL3-206ENST00000439286 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
GARNL3-206ENST00000439286 TIAM1Q13009 1591 aa21.4■■□□□ 1.02
GARNL3-206ENST00000439286 MBD5Q9P267 1494 aa21.4■■□□□ 1.02
GARNL3-206ENST00000439286 RTEL1-TNFRSF6BF6WH68 1400 aa21.4■■□□□ 1.02
GARNL3-206ENST00000439286 NCOA2Q15596 1464 aa21.39■■□□□ 1.02
GARNL3-206ENST00000439286 DHX29Q7Z478 1369 aaKnown RBP21.38■■□□□ 1.01
GARNL3-206ENST00000439286 C3P01024 1663 aa21.37■■□□□ 1.01
GARNL3-206ENST00000439286 KIF3BO15066 747 aa21.37■■□□□ 1.01
GARNL3-206ENST00000439286 PTPRTO14522 1441 aa21.37■■□□□ 1.01
GARNL3-206ENST00000439286 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
GARNL3-206ENST00000439286 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
GARNL3-206ENST00000439286 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
GARNL3-206ENST00000439286 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1.01
GARNL3-206ENST00000439286 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1.01
GARNL3-206ENST00000439286 PLXNC1O60486 1568 aa21.33■■□□□ 1.01
GARNL3-206ENST00000439286 APLP2Q06481 763 aa21.33■■□□□ 1.01
GARNL3-206ENST00000439286 CAMSAP2Q08AD1 1489 aa21.32■■□□□ 1
GARNL3-206ENST00000439286 NCOA1Q15788 1441 aa21.31■■□□□ 1
GARNL3-206ENST00000439286 PKD2Q13563 968 aa21.31■■□□□ 1
GARNL3-206ENST00000439286 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
GARNL3-206ENST00000439286 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
GARNL3-206ENST00000439286 PTPRKQ15262 1439 aa21.29■■□□□ 1
GARNL3-206ENST00000439286 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
GARNL3-206ENST00000439286 MROH2AA6NES4 1674 aa21.28■■□□□ 1
GARNL3-206ENST00000439286 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
GARNL3-206ENST00000439286 ADGBQ8N7X0 1667 aa21.27■■□□□ 1
GARNL3-206ENST00000439286 STRCQ7RTU9 1775 aa21.25■□□□□ 0.99
GARNL3-206ENST00000439286 CAMSAP1Q5T5Y3 1602 aa21.25■□□□□ 0.99
GARNL3-206ENST00000439286 CLTCQ00610 1675 aaKnown RBP21.24■□□□□ 0.99
GARNL3-206ENST00000439286 FBXO31Q5XUX0 539 aaPredicted RBP21.22■□□□□ 0.99
GARNL3-206ENST00000439286 TNRQ92752 1358 aa21.21■□□□□ 0.99
GARNL3-206ENST00000439286 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms