RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 ABCA8O94911 1581 aa11.34□□□□□ -0.59
ERCC8-203ENST00000439176 CD109Q6YHK3 1445 aa11.34□□□□□ -0.59
ERCC8-203ENST00000439176 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
ERCC8-203ENST00000439176 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
ERCC8-203ENST00000439176 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
ERCC8-203ENST00000439176 COL17A1Q9UMD9 1497 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-203ENST00000439176 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
ERCC8-203ENST00000439176 CFAP43Q8NDM7 1665 aa11.29□□□□□ -0.6
ERCC8-203ENST00000439176 ATP10BO94823 1461 aa11.27□□□□□ -0.6
ERCC8-203ENST00000439176 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
ERCC8-203ENST00000439176 PHLDB1Q86UU1 1377 aa11.26□□□□□ -0.61
ERCC8-203ENST00000439176 SAMD9Q5K651 1589 aa11.25□□□□□ -0.61
ERCC8-203ENST00000439176 LHX8Q68G74 356 aa11.25□□□□□ -0.61
ERCC8-203ENST00000439176 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
ERCC8-203ENST00000439176 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
ERCC8-203ENST00000439176 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
ERCC8-203ENST00000439176 ARAP3Q8WWN8 1544 aa11.21□□□□□ -0.61
ERCC8-203ENST00000439176 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.61
ERCC8-203ENST00000439176 EFCAB5A4FU69 1503 aa11.2□□□□□ -0.62
ERCC8-203ENST00000439176 KIF21BO75037 1637 aa11.2□□□□□ -0.62
ERCC8-203ENST00000439176 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
ERCC8-203ENST00000439176 NUP153P49790 1475 aaKnown RBP11.19□□□□□ -0.62
ERCC8-203ENST00000439176 NEO1Q92859 1461 aa11.19□□□□□ -0.62
ERCC8-203ENST00000439176 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
ERCC8-203ENST00000439176 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
ERCC8-203ENST00000439176 ATP1B4Q9UN42 357 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-203ENST00000439176 CDK11AQ9UQ88 783 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-203ENST00000439176 ARID4BQ4LE39 1312 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-203ENST00000439176 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-203ENST00000439176 FMN1Q68DA7 1419 aa11.14□□□□□ -0.63
ERCC8-203ENST00000439176 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
ERCC8-203ENST00000439176 GABBR2O75899 941 aa11.12□□□□□ -0.63
ERCC8-203ENST00000439176 DENND4BO75064 1496 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-203ENST00000439176 AKNAQ7Z591 1439 aa11.11□□□□□ -0.63
ERCC8-203ENST00000439176 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
ERCC8-203ENST00000439176 FANCAO15360 1455 aa11.11□□□□□ -0.63
ERCC8-203ENST00000439176 CFAP74Q9C0B2 1584 aa11.1□□□□□ -0.63
ERCC8-203ENST00000439176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.09□□□□□ -0.63
ERCC8-203ENST00000439176 HECW2Q9P2P5 1572 aa11.08□□□□□ -0.64
ERCC8-203ENST00000439176 HECW1Q76N89 1606 aa11.07□□□□□ -0.64
ERCC8-203ENST00000439176 EFCAB2Q5VUJ9 269 aa11.07□□□□□ -0.64
ERCC8-203ENST00000439176 CDK13Q14004 1512 aaKnown RBP11.07□□□□□ -0.64
ERCC8-203ENST00000439176 POGZQ7Z3K3 1410 aa11.07□□□□□ -0.64
ERCC8-203ENST00000439176 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
ERCC8-203ENST00000439176 PLCH2O75038 1416 aa11.06□□□□□ -0.64
ERCC8-203ENST00000439176 CLIP1P30622 1438 aa11.05□□□□□ -0.64
ERCC8-203ENST00000439176 PTPRMP28827 1452 aa11.05□□□□□ -0.64
ERCC8-203ENST00000439176 MAGI2Q86UL8 1455 aa11.05□□□□□ -0.64
ERCC8-203ENST00000439176 FRMPD1Q5SYB0 1578 aa11.04□□□□□ -0.64
ERCC8-203ENST00000439176 TTC37Q6PGP7 1564 aa11.04□□□□□ -0.64
ERCC8-203ENST00000439176 SCAPERQ9BY12 1400 aa11.04□□□□□ -0.64
ERCC8-203ENST00000439176 ADAMTSL3P82987 1691 aa11.03□□□□□ -0.64
ERCC8-203ENST00000439176 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
ERCC8-203ENST00000439176 BCORL1Q5H9F3 1711 aa11.02□□□□□ -0.65
ERCC8-203ENST00000439176 RICTORQ6R327 1708 aa11.02□□□□□ -0.65
ERCC8-203ENST00000439176 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-203ENST00000439176 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
ERCC8-203ENST00000439176 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
ERCC8-203ENST00000439176 ZFYVE16Q7Z3T8 1539 aa11.02□□□□□ -0.65
ERCC8-203ENST00000439176 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
ERCC8-203ENST00000439176 ZMYM4Q5VZL5 1548 aa11.01□□□□□ -0.65
ERCC8-203ENST00000439176 KIF14Q15058 1648 aa11.01□□□□□ -0.65
ERCC8-203ENST00000439176 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
ERCC8-203ENST00000439176 MYO5CQ9NQX4 1742 aa10.99□□□□□ -0.65
ERCC8-203ENST00000439176 MLECQ14165 292 aa10.99□□□□□ -0.65
ERCC8-203ENST00000439176 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
ERCC8-203ENST00000439176 MADDQ8WXG6 1647 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 SPDYE2BA6NHP3 402 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 SPDYE6P0CI01 402 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 SPDYE2Q495Y8 402 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
ERCC8-203ENST00000439176 CASKIN1Q8WXD9 1431 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 YEATS2Q9ULM3 1422 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 ZNF518AQ6AHZ1 1483 aa10.98□□□□□ -0.65
ERCC8-203ENST00000439176 ATP10AO60312 1499 aa10.97□□□□□ -0.65
ERCC8-203ENST00000439176 C9orf84Q5VXU9 1444 aa10.96□□□□□ -0.65
ERCC8-203ENST00000439176 AFAP1Q8N556 730 aa10.96□□□□□ -0.65
ERCC8-203ENST00000439176 RIMS1Q86UR5 1692 aaKnown RBP10.95□□□□□ -0.66
ERCC8-203ENST00000439176 PCF11O94913 1555 aaKnown RBP10.94□□□□□ -0.66
ERCC8-203ENST00000439176 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
ERCC8-203ENST00000439176 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
ERCC8-203ENST00000439176 LMTK3Q96Q04 1460 aa10.92□□□□□ -0.66
ERCC8-203ENST00000439176 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
ERCC8-203ENST00000439176 KDM5CP41229 1560 aa10.9□□□□□ -0.66
ERCC8-203ENST00000439176 MLH3Q9UHC1 1453 aa10.9□□□□□ -0.66
ERCC8-203ENST00000439176 FBXO41Q8TF61 875 aa10.9□□□□□ -0.66
ERCC8-203ENST00000439176 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.67
ERCC8-203ENST00000439176 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
ERCC8-203ENST00000439176 PREX2Q70Z35 1606 aa10.89□□□□□ -0.67
ERCC8-203ENST00000439176 HSPA2P54652 639 aa10.89□□□□□ -0.67
ERCC8-203ENST00000439176 CDC42BPBQ9Y5S2 1711 aa10.89□□□□□ -0.67
ERCC8-203ENST00000439176 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
ERCC8-203ENST00000439176 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
ERCC8-203ENST00000439176 MTUS2Q5JR59 1369 aa10.88□□□□□ -0.67
ERCC8-203ENST00000439176 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
ERCC8-203ENST00000439176 ABCC1P33527 1531 aa10.87□□□□□ -0.67
ERCC8-203ENST00000439176 CCNB3Q8WWL7 1395 aa10.87□□□□□ -0.67
ERCC8-203ENST00000439176 SIGLEC1Q9BZZ2 1709 aa10.87□□□□□ -0.67
ERCC8-203ENST00000439176 POTEIP0CG38 1075 aa10.86□□□□□ -0.67
ERCC8-203ENST00000439176 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms