RNA–Protein interactions for RNA: ENST00000438326.2

PMS2P3-206, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-206ENST00000438326 PLCH2O75038 1416 aa8.85□□□□□ -0.99
PMS2P3-206ENST00000438326 KDM5CP41229 1560 aa8.84□□□□□ -0.99
PMS2P3-206ENST00000438326 YEATS2Q9ULM3 1422 aa8.83□□□□□ -1
PMS2P3-206ENST00000438326 PREX1Q8TCU6 1659 aa8.83□□□□□ -1
PMS2P3-206ENST00000438326 ARHGEF12Q9NZN5 1544 aa8.83□□□□□ -1
PMS2P3-206ENST00000438326 PREX2Q70Z35 1606 aa8.83□□□□□ -1
PMS2P3-206ENST00000438326 ARID4BQ4LE39 1312 aaPredicted RBP8.82□□□□□ -1
PMS2P3-206ENST00000438326 REREQ9P2R6 1566 aa8.82□□□□□ -1
PMS2P3-206ENST00000438326 C9orf84Q5VXU9 1444 aa8.82□□□□□ -1
PMS2P3-206ENST00000438326 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
PMS2P3-206ENST00000438326 CDC42BPBQ9Y5S2 1711 aa8.82□□□□□ -1
PMS2P3-206ENST00000438326 ZNF518AQ6AHZ1 1483 aa8.82□□□□□ -1
PMS2P3-206ENST00000438326 TROQ12816 1431 aaPredicted RBP8.81□□□□□ -1
PMS2P3-206ENST00000438326 SCAPERQ9BY12 1400 aa8.81□□□□□ -1
PMS2P3-206ENST00000438326 CLIP1P30622 1438 aa8.8□□□□□ -1
PMS2P3-206ENST00000438326 ARHGAP5Q13017 1502 aa8.8□□□□□ -1
PMS2P3-206ENST00000438326 ATP10AO60312 1499 aa8.8□□□□□ -1
PMS2P3-206ENST00000438326 CCDC18Q5T9S5 1454 aa8.8□□□□□ -1
PMS2P3-206ENST00000438326 DIP2CQ9Y2E4 1556 aa8.8□□□□□ -1
PMS2P3-206ENST00000438326 ITSN2Q9NZM3 1697 aa8.8□□□□□ -1
PMS2P3-206ENST00000438326 FBXO41Q8TF61 875 aa8.79□□□□□ -1
PMS2P3-206ENST00000438326 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
PMS2P3-206ENST00000438326 ABCA6Q8N139 1617 aa8.79□□□□□ -1
PMS2P3-206ENST00000438326 ABCC1P33527 1531 aa8.79□□□□□ -1
PMS2P3-206ENST00000438326 CDC42BPAQ5VT25 1732 aa8.78□□□□□ -1
PMS2P3-206ENST00000438326 EFCAB2Q5VUJ9 269 aa8.77□□□□□ -1.01
PMS2P3-206ENST00000438326 CASKIN1Q8WXD9 1431 aa8.77□□□□□ -1.01
PMS2P3-206ENST00000438326 FYCO1Q9BQS8 1478 aa8.77□□□□□ -1.01
PMS2P3-206ENST00000438326 MLH3Q9UHC1 1453 aa8.77□□□□□ -1.01
PMS2P3-206ENST00000438326 AGLP35573 1532 aa8.76□□□□□ -1.01
PMS2P3-206ENST00000438326 UBTFP17480 764 aaKnown RBP8.76□□□□□ -1.01
PMS2P3-206ENST00000438326 SETD1BQ9UPS6 1966 aaKnown RBP8.75□□□□□ -1.01
PMS2P3-206ENST00000438326 C3P01024 1663 aa8.75□□□□□ -1.01
PMS2P3-206ENST00000438326 KIDINS220Q9ULH0 1771 aa8.75□□□□□ -1.01
PMS2P3-206ENST00000438326 STRCQ7RTU9 1775 aa8.74□□□□□ -1.01
PMS2P3-206ENST00000438326 MROH2AA6NES4 1674 aa8.74□□□□□ -1.01
PMS2P3-206ENST00000438326 SAMD9LQ8IVG5 1584 aa8.72□□□□□ -1.01
PMS2P3-206ENST00000438326 INO80Q9ULG1 1556 aaPredicted RBP8.71□□□□□ -1.02
PMS2P3-206ENST00000438326 HSPA2P54652 639 aa8.71□□□□□ -1.02
PMS2P3-206ENST00000438326 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
PMS2P3-206ENST00000438326 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.02
PMS2P3-206ENST00000438326 TRAPPC8Q9Y2L5 1435 aa8.71□□□□□ -1.02
PMS2P3-206ENST00000438326 PLXNC1O60486 1568 aa8.7□□□□□ -1.02
PMS2P3-206ENST00000438326 MLECQ14165 292 aa8.7□□□□□ -1.02
PMS2P3-206ENST00000438326 CNTLNQ9NXG0 1405 aa8.7□□□□□ -1.02
PMS2P3-206ENST00000438326 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
PMS2P3-206ENST00000438326 AFAP1Q8N556 730 aa8.69□□□□□ -1.02
PMS2P3-206ENST00000438326 PLEKHH2Q8IVE3 1493 aa8.69□□□□□ -1.02
PMS2P3-206ENST00000438326 ATP7AQ04656 1500 aa8.69□□□□□ -1.02
PMS2P3-206ENST00000438326 ZNF142P52746 1687 aaPredicted RBP8.69□□□□□ -1.02
PMS2P3-206ENST00000438326 ADGBQ8N7X0 1667 aa8.68□□□□□ -1.02
PMS2P3-206ENST00000438326 SUPT6HQ7KZ85 1726 aaKnown RBP8.67□□□□□ -1.02
PMS2P3-206ENST00000438326 EHMT2Q96KQ7 1210 aa8.67□□□□□ -1.02
PMS2P3-206ENST00000438326 GPATCH8Q9UKJ3 1502 aaKnown RBP8.67□□□□□ -1.02
PMS2P3-206ENST00000438326 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
PMS2P3-206ENST00000438326 MYO3AQ8NEV4 1616 aa8.66□□□□□ -1.02
PMS2P3-206ENST00000438326 PTPRTO14522 1441 aa8.66□□□□□ -1.02
PMS2P3-206ENST00000438326 NPATQ14207 1427 aa8.66□□□□□ -1.02
PMS2P3-206ENST00000438326 PLPPR3Q6T4P5 718 aa8.66□□□□□ -1.02
PMS2P3-206ENST00000438326 CERKQ8TCT0 537 aa8.66□□□□□ -1.02
PMS2P3-206ENST00000438326 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.02
PMS2P3-206ENST00000438326 TIAM1Q13009 1591 aa8.65□□□□□ -1.02
PMS2P3-206ENST00000438326 EHBP1L1Q8N3D4 1523 aa8.65□□□□□ -1.02
PMS2P3-206ENST00000438326 DMRT2Q9Y5R5 561 aa8.65□□□□□ -1.02
PMS2P3-206ENST00000438326 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
PMS2P3-206ENST00000438326 NCOA1Q15788 1441 aa8.64□□□□□ -1.03
PMS2P3-206ENST00000438326 CEBPAP49715 358 aaPredicted RBP8.64□□□□□ -1.03
PMS2P3-206ENST00000438326 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
PMS2P3-206ENST00000438326 LTBP4Q8N2S1 1624 aa8.63□□□□□ -1.03
PMS2P3-206ENST00000438326 FAM135AQ9P2D6 1515 aa8.63□□□□□ -1.03
PMS2P3-206ENST00000438326 A2MP01023 1474 aa8.63□□□□□ -1.03
PMS2P3-206ENST00000438326 CAMSAP1Q5T5Y3 1602 aa8.62□□□□□ -1.03
PMS2P3-206ENST00000438326 SPAG9O60271 1321 aaKnown RBP8.62□□□□□ -1.03
PMS2P3-206ENST00000438326 CEP170BQ9Y4F5 1589 aaPredicted RBP8.62□□□□□ -1.03
PMS2P3-206ENST00000438326 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
PMS2P3-206ENST00000438326 CCNB3Q8WWL7 1395 aa8.61□□□□□ -1.03
PMS2P3-206ENST00000438326 PLA2R1Q13018 1463 aa8.61□□□□□ -1.03
PMS2P3-206ENST00000438326 MTUS2Q5JR59 1369 aa8.61□□□□□ -1.03
PMS2P3-206ENST00000438326 CEP162Q5TB80 1403 aa8.6□□□□□ -1.03
PMS2P3-206ENST00000438326 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
PMS2P3-206ENST00000438326 MBD5Q9P267 1494 aa8.59□□□□□ -1.03
PMS2P3-206ENST00000438326 CFDP1Q9UEE9 299 aaPredicted RBP8.59□□□□□ -1.03
PMS2P3-206ENST00000438326 RTEL1-TNFRSF6BF6WH68 1400 aa8.59□□□□□ -1.03
PMS2P3-206ENST00000438326 PTPRKQ15262 1439 aa8.59□□□□□ -1.03
PMS2P3-206ENST00000438326 ZMYM3Q14202 1370 aa8.59□□□□□ -1.03
PMS2P3-206ENST00000438326 TCOF1Q13428 1488 aaKnown RBP8.58□□□□□ -1.04
PMS2P3-206ENST00000438326 ZNF777Q9ULD5 760 aaPredicted RBP8.58□□□□□ -1.04
PMS2P3-206ENST00000438326 ARHGEF5Q12774 1597 aa8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 SPATA31D1Q6ZQQ2 1576 aa8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 HNRNPMP52272 730 aaKnown RBP eCLIP8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 PPP6R1Q9UPN7 881 aa8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 KDM5DQ9BY66 1539 aa8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
PMS2P3-206ENST00000438326 ZC3H13Q5T200 1668 aaKnown RBP8.56□□□□□ -1.04
PMS2P3-206ENST00000438326 DNMT1P26358 1616 aaKnown RBP8.56□□□□□ -1.04
PMS2P3-206ENST00000438326 A2ML1A8K2U0 1454 aa8.56□□□□□ -1.04
PMS2P3-206ENST00000438326 RNF17Q9BXT8 1623 aaKnown RBP8.55□□□□□ -1.04
PMS2P3-206ENST00000438326 PZPP20742 1482 aa8.55□□□□□ -1.04
PMS2P3-206ENST00000438326 NCOA2Q15596 1464 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms