RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 FRMPD1Q5SYB0 1578 aa13.91□□□□□ -0.18
HERPUD2-206ENST00000438224 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
HERPUD2-206ENST00000438224 MYO5CQ9NQX4 1742 aa13.89□□□□□ -0.19
HERPUD2-206ENST00000438224 NEO1Q92859 1461 aa13.88□□□□□ -0.19
HERPUD2-206ENST00000438224 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
HERPUD2-206ENST00000438224 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
HERPUD2-206ENST00000438224 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
HERPUD2-206ENST00000438224 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
HERPUD2-206ENST00000438224 LOC105371045A0A1W2PR82 267 aa13.86□□□□□ -0.19
HERPUD2-206ENST00000438224 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
HERPUD2-206ENST00000438224 CDC42BPBQ9Y5S2 1711 aa13.85□□□□□ -0.19
HERPUD2-206ENST00000438224 CFAP74Q9C0B2 1584 aa13.85□□□□□ -0.19
HERPUD2-206ENST00000438224 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
HERPUD2-206ENST00000438224 FANCAO15360 1455 aa13.84□□□□□ -0.19
HERPUD2-206ENST00000438224 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
HERPUD2-206ENST00000438224 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
HERPUD2-206ENST00000438224 PLCH2O75038 1416 aa13.81□□□□□ -0.2
HERPUD2-206ENST00000438224 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
HERPUD2-206ENST00000438224 RAPGEF3O95398 923 aa13.81□□□□□ -0.2
HERPUD2-206ENST00000438224 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
HERPUD2-206ENST00000438224 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
HERPUD2-206ENST00000438224 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
HERPUD2-206ENST00000438224 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
HERPUD2-206ENST00000438224 DENND4BO75064 1496 aaPredicted RBP13.78□□□□□ -0.2
HERPUD2-206ENST00000438224 ZMYM4Q5VZL5 1548 aa13.78□□□□□ -0.2
HERPUD2-206ENST00000438224 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
HERPUD2-206ENST00000438224 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
HERPUD2-206ENST00000438224 POGZQ7Z3K3 1410 aa13.74□□□□□ -0.21
HERPUD2-206ENST00000438224 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
HERPUD2-206ENST00000438224 ITSN2Q9NZM3 1697 aa13.74□□□□□ -0.21
HERPUD2-206ENST00000438224 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
HERPUD2-206ENST00000438224 ABCC1P33527 1531 aa13.72□□□□□ -0.21
HERPUD2-206ENST00000438224 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
HERPUD2-206ENST00000438224 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
HERPUD2-206ENST00000438224 KDM5CP41229 1560 aa13.71□□□□□ -0.21
HERPUD2-206ENST00000438224 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.21
HERPUD2-206ENST00000438224 ZFYVE16Q7Z3T8 1539 aa13.71□□□□□ -0.21
HERPUD2-206ENST00000438224 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
HERPUD2-206ENST00000438224 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.21
HERPUD2-206ENST00000438224 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
HERPUD2-206ENST00000438224 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.22
HERPUD2-206ENST00000438224 TIAM1Q13009 1591 aa13.71□□□□□ -0.22
HERPUD2-206ENST00000438224 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
HERPUD2-206ENST00000438224 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
HERPUD2-206ENST00000438224 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
HERPUD2-206ENST00000438224 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
HERPUD2-206ENST00000438224 MADDQ8WXG6 1647 aa13.67□□□□□ -0.22
HERPUD2-206ENST00000438224 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
HERPUD2-206ENST00000438224 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
HERPUD2-206ENST00000438224 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
HERPUD2-206ENST00000438224 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
HERPUD2-206ENST00000438224 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
HERPUD2-206ENST00000438224 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
HERPUD2-206ENST00000438224 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
HERPUD2-206ENST00000438224 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
HERPUD2-206ENST00000438224 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
HERPUD2-206ENST00000438224 NCOA2Q15596 1464 aa13.62□□□□□ -0.23
HERPUD2-206ENST00000438224 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
HERPUD2-206ENST00000438224 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
HERPUD2-206ENST00000438224 ATP10AO60312 1499 aa13.61□□□□□ -0.23
HERPUD2-206ENST00000438224 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
HERPUD2-206ENST00000438224 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
HERPUD2-206ENST00000438224 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
HERPUD2-206ENST00000438224 REREQ9P2R6 1566 aa13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 PTPRMP28827 1452 aa13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-206ENST00000438224 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
HERPUD2-206ENST00000438224 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
HERPUD2-206ENST00000438224 CFDP1Q9UEE9 299 aaPredicted RBP13.57□□□□□ -0.24
HERPUD2-206ENST00000438224 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
HERPUD2-206ENST00000438224 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
HERPUD2-206ENST00000438224 HNRNPMP52272 730 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■■■ 28.7
HERPUD2-206ENST00000438224 ATP7AQ04656 1500 aa13.55□□□□□ -0.24
HERPUD2-206ENST00000438224 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
HERPUD2-206ENST00000438224 FKBP8Q14318 412 aa13.53□□□□□ -0.24
HERPUD2-206ENST00000438224 AGLP35573 1532 aa13.53□□□□□ -0.24
HERPUD2-206ENST00000438224 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
HERPUD2-206ENST00000438224 MLECQ14165 292 aa13.52□□□□□ -0.25
HERPUD2-206ENST00000438224 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
HERPUD2-206ENST00000438224 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
HERPUD2-206ENST00000438224 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
HERPUD2-206ENST00000438224 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
HERPUD2-206ENST00000438224 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
HERPUD2-206ENST00000438224 MYOM3Q5VTT5 1437 aa13.48□□□□□ -0.25
HERPUD2-206ENST00000438224 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
HERPUD2-206ENST00000438224 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
HERPUD2-206ENST00000438224 C3P01024 1663 aa13.47□□□□□ -0.25
HERPUD2-206ENST00000438224 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
HERPUD2-206ENST00000438224 A2MP01023 1474 aa13.46□□□□□ -0.25
HERPUD2-206ENST00000438224 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
HERPUD2-206ENST00000438224 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
HERPUD2-206ENST00000438224 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
HERPUD2-206ENST00000438224 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
HERPUD2-206ENST00000438224 RTEL1-TNFRSF6BF6WH68 1400 aa13.44□□□□□ -0.26
HERPUD2-206ENST00000438224 MIA2Q96PC5 1412 aa13.44□□□□□ -0.26
HERPUD2-206ENST00000438224 MAST1Q9Y2H9 1570 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms