RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 NCOA2Q15596 1464 aa18■□□□□ 0.47
SNHG3-202ENST00000437681 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
SNHG3-202ENST00000437681 MIA2Q96PC5 1412 aa17.99■□□□□ 0.47
SNHG3-202ENST00000437681 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
SNHG3-202ENST00000437681 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
SNHG3-202ENST00000437681 AKNAQ7Z591 1439 aa17.97■□□□□ 0.47
SNHG3-202ENST00000437681 EFCAB2Q5VUJ9 269 aa17.96■□□□□ 0.47
SNHG3-202ENST00000437681 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
SNHG3-202ENST00000437681 ARHGAP5Q13017 1502 aa17.96■□□□□ 0.47
SNHG3-202ENST00000437681 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
SNHG3-202ENST00000437681 ABCC1P33527 1531 aa17.95■□□□□ 0.46
SNHG3-202ENST00000437681 ARID3CA6NKF2 412 aa17.95■□□□□ 0.46
SNHG3-202ENST00000437681 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
SNHG3-202ENST00000437681 KDM5CP41229 1560 aa17.92■□□□□ 0.46
SNHG3-202ENST00000437681 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
SNHG3-202ENST00000437681 DENND4BO75064 1496 aaPredicted RBP17.92■□□□□ 0.46
SNHG3-202ENST00000437681 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
SNHG3-202ENST00000437681 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
SNHG3-202ENST00000437681 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
SNHG3-202ENST00000437681 ADGRL1O94910 1474 aa17.9■□□□□ 0.46
SNHG3-202ENST00000437681 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
SNHG3-202ENST00000437681 POGZQ7Z3K3 1410 aa17.89■□□□□ 0.45
SNHG3-202ENST00000437681 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.45
SNHG3-202ENST00000437681 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
SNHG3-202ENST00000437681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNHG3-202ENST00000437681 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
SNHG3-202ENST00000437681 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
SNHG3-202ENST00000437681 MLH3Q9UHC1 1453 aa17.84■□□□□ 0.45
SNHG3-202ENST00000437681 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
SNHG3-202ENST00000437681 HECW2Q9P2P5 1572 aa17.83■□□□□ 0.44
SNHG3-202ENST00000437681 ARHGEF40Q8TER5 1519 aa17.83■□□□□ 0.44
SNHG3-202ENST00000437681 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.44
SNHG3-202ENST00000437681 SCAPERQ9BY12 1400 aa17.83■□□□□ 0.44
SNHG3-202ENST00000437681 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.44
SNHG3-202ENST00000437681 PTPN23Q9H3S7 1636 aa17.82■□□□□ 0.44
SNHG3-202ENST00000437681 CAMSAP2Q08AD1 1489 aa17.82■□□□□ 0.44
SNHG3-202ENST00000437681 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
SNHG3-202ENST00000437681 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
SNHG3-202ENST00000437681 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
SNHG3-202ENST00000437681 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
SNHG3-202ENST00000437681 INO80Q9ULG1 1556 aaPredicted RBP17.8■□□□□ 0.44
SNHG3-202ENST00000437681 CROCC2H7BZ55 1655 aa17.8■□□□□ 0.44
SNHG3-202ENST00000437681 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
SNHG3-202ENST00000437681 CCDC141Q6ZP82 1450 aa17.79■□□□□ 0.44
SNHG3-202ENST00000437681 ZFYVE16Q7Z3T8 1539 aa17.78■□□□□ 0.44
SNHG3-202ENST00000437681 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
SNHG3-202ENST00000437681 DNMT1P26358 1616 aaKnown RBP17.77■□□□□ 0.44
SNHG3-202ENST00000437681 ADGBQ8N7X0 1667 aa17.76■□□□□ 0.43
SNHG3-202ENST00000437681 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
SNHG3-202ENST00000437681 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
SNHG3-202ENST00000437681 RRBP1Q9P2E9 1410 aaKnown RBP17.74■□□□□ 0.43
SNHG3-202ENST00000437681 KIDINS220Q9ULH0 1771 aa17.74■□□□□ 0.43
SNHG3-202ENST00000437681 AGLP35573 1532 aa17.73■□□□□ 0.43
SNHG3-202ENST00000437681 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
SNHG3-202ENST00000437681 FAM135AQ9P2D6 1515 aa17.72■□□□□ 0.43
SNHG3-202ENST00000437681 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
SNHG3-202ENST00000437681 DIP2CQ9Y2E4 1556 aa17.71■□□□□ 0.43
SNHG3-202ENST00000437681 ATP10AO60312 1499 aa17.71■□□□□ 0.43
SNHG3-202ENST00000437681 C9orf84Q5VXU9 1444 aa17.7■□□□□ 0.42
SNHG3-202ENST00000437681 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
SNHG3-202ENST00000437681 ABCA6Q8N139 1617 aa17.68■□□□□ 0.42
SNHG3-202ENST00000437681 EIF2AK4Q9P2K8 1649 aaKnown RBP17.68■□□□□ 0.42
SNHG3-202ENST00000437681 DAPK1P53355 1430 aa17.66■□□□□ 0.42
SNHG3-202ENST00000437681 SPAG9O60271 1321 aaKnown RBP17.64■□□□□ 0.41
SNHG3-202ENST00000437681 ABCC5O15440 1437 aa17.64■□□□□ 0.41
SNHG3-202ENST00000437681 ROCK1Q13464 1354 aa17.63■□□□□ 0.41
SNHG3-202ENST00000437681 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
SNHG3-202ENST00000437681 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
SNHG3-202ENST00000437681 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
SNHG3-202ENST00000437681 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
SNHG3-202ENST00000437681 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
SNHG3-202ENST00000437681 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNHG3-202ENST00000437681 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
SNHG3-202ENST00000437681 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
SNHG3-202ENST00000437681 A2MP01023 1474 aa17.59■□□□□ 0.41
SNHG3-202ENST00000437681 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
SNHG3-202ENST00000437681 YEATS2Q9ULM3 1422 aa17.59■□□□□ 0.41
SNHG3-202ENST00000437681 ERBINQ96RT1 1412 aa17.58■□□□□ 0.41
SNHG3-202ENST00000437681 AFAP1Q8N556 730 aa17.58■□□□□ 0.41
SNHG3-202ENST00000437681 RNF17Q9BXT8 1623 aaKnown RBP17.58■□□□□ 0.4
SNHG3-202ENST00000437681 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
SNHG3-202ENST00000437681 DHX29Q7Z478 1369 aaKnown RBP17.57■□□□□ 0.4
SNHG3-202ENST00000437681 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
SNHG3-202ENST00000437681 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
SNHG3-202ENST00000437681 ZC3H13Q5T200 1668 aaKnown RBP17.54■□□□□ 0.4
SNHG3-202ENST00000437681 DEPDC5O75140 1603 aa17.53■□□□□ 0.4
SNHG3-202ENST00000437681 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
SNHG3-202ENST00000437681 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.4
SNHG3-202ENST00000437681 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.4
SNHG3-202ENST00000437681 CNTLNQ9NXG0 1405 aa17.52■□□□□ 0.39
SNHG3-202ENST00000437681 GCC2Q8IWJ2 1684 aa17.52■□□□□ 0.39
SNHG3-202ENST00000437681 FER1L4A9Z1Z3 1794 aa17.48■□□□□ 0.39
SNHG3-202ENST00000437681 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
SNHG3-202ENST00000437681 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
SNHG3-202ENST00000437681 UNC13BO14795 1591 aa17.46■□□□□ 0.39
SNHG3-202ENST00000437681 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
SNHG3-202ENST00000437681 VWDEQ8N2E2 1590 aa17.45■□□□□ 0.38
SNHG3-202ENST00000437681 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
SNHG3-202ENST00000437681 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
SNHG3-202ENST00000437681 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms