RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
HMGB1P31-201ENST00000437242 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P31-201ENST00000437242 POTEB3A0JP26 581 aa10.87□□□□□ -0.67
HMGB1P31-201ENST00000437242 POTEBQ6S5H4 581 aa10.87□□□□□ -0.67
HMGB1P31-201ENST00000437242 ERBB3P21860 1342 aa10.85□□□□□ -0.67
HMGB1P31-201ENST00000437242 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
HMGB1P31-201ENST00000437242 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
HMGB1P31-201ENST00000437242 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
HMGB1P31-201ENST00000437242 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
HMGB1P31-201ENST00000437242 MMRN1Q13201 1228 aa10.81□□□□□ -0.68
HMGB1P31-201ENST00000437242 VARS2Q5ST30 1063 aaKnown RBP10.78□□□□□ -0.68
HMGB1P31-201ENST00000437242 C2orf72A6NCS6 295 aa10.77□□□□□ -0.69
HMGB1P31-201ENST00000437242 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
HMGB1P31-201ENST00000437242 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
HMGB1P31-201ENST00000437242 KIF3CO14782 793 aa10.75□□□□□ -0.69
HMGB1P31-201ENST00000437242 ARSIQ5FYB1 569 aa10.74□□□□□ -0.69
HMGB1P31-201ENST00000437242 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
HMGB1P31-201ENST00000437242 PPP1R37O75864 691 aa10.72□□□□□ -0.69
HMGB1P31-201ENST00000437242 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
HMGB1P31-201ENST00000437242 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGB1P31-201ENST00000437242 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
HMGB1P31-201ENST00000437242 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P31-201ENST00000437242 SLC34A2O95436 690 aa10.64□□□□□ -0.71
HMGB1P31-201ENST00000437242 NUDT7P0C024 238 aa10.64□□□□□ -0.71
HMGB1P31-201ENST00000437242 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
HMGB1P31-201ENST00000437242 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
HMGB1P31-201ENST00000437242 DNAJC5Q9H3Z4 198 aa10.59□□□□□ -0.71
HMGB1P31-201ENST00000437242 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
HMGB1P31-201ENST00000437242 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
HMGB1P31-201ENST00000437242 FOXK1P85037 733 aa10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 PLPP6Q8IY26 295 aa10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 RNF166Q96A37 237 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P31-201ENST00000437242 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
HMGB1P31-201ENST00000437242 PTGER2P43116 358 aa10.54□□□□□ -0.72
HMGB1P31-201ENST00000437242 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
HMGB1P31-201ENST00000437242 PBX2P40425 430 aa10.53□□□□□ -0.72
HMGB1P31-201ENST00000437242 LSM11P83369 360 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGB1P31-201ENST00000437242 DSG2Q14126 1118 aa10.53□□□□□ -0.72
HMGB1P31-201ENST00000437242 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
HMGB1P31-201ENST00000437242 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
HMGB1P31-201ENST00000437242 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P31-201ENST00000437242 TBC1D12O60347 775 aa10.48□□□□□ -0.73
HMGB1P31-201ENST00000437242 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
HMGB1P31-201ENST00000437242 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
HMGB1P31-201ENST00000437242 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
HMGB1P31-201ENST00000437242 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
HMGB1P31-201ENST00000437242 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
HMGB1P31-201ENST00000437242 GTPBP6O43824 516 aaPredicted RBP10.43□□□□□ -0.74
HMGB1P31-201ENST00000437242 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
HMGB1P31-201ENST00000437242 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
HMGB1P31-201ENST00000437242 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGB1P31-201ENST00000437242 PDE4AP27815 886 aa10.4□□□□□ -0.74
HMGB1P31-201ENST00000437242 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
HMGB1P31-201ENST00000437242 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
HMGB1P31-201ENST00000437242 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
HMGB1P31-201ENST00000437242 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
HMGB1P31-201ENST00000437242 PSEN2P49810 448 aa10.35□□□□□ -0.75
HMGB1P31-201ENST00000437242 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
HMGB1P31-201ENST00000437242 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
HMGB1P31-201ENST00000437242 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
HMGB1P31-201ENST00000437242 TK2O00142 265 aa10.33□□□□□ -0.76
HMGB1P31-201ENST00000437242 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
HMGB1P31-201ENST00000437242 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
HMGB1P31-201ENST00000437242 MFSD10Q14728 455 aa10.29□□□□□ -0.76
HMGB1P31-201ENST00000437242 EVI5O60447 810 aa10.28□□□□□ -0.76
HMGB1P31-201ENST00000437242 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
HMGB1P31-201ENST00000437242 HRO43593 1189 aa10.27□□□□□ -0.77
HMGB1P31-201ENST00000437242 FOSBP53539 338 aa10.27□□□□□ -0.77
HMGB1P31-201ENST00000437242 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
HMGB1P31-201ENST00000437242 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
HMGB1P31-201ENST00000437242 JPH4Q96JJ6 628 aa10.25□□□□□ -0.77
HMGB1P31-201ENST00000437242 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
HMGB1P31-201ENST00000437242 PTPREP23469 700 aa10.24□□□□□ -0.77
HMGB1P31-201ENST00000437242 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
HMGB1P31-201ENST00000437242 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P31-201ENST00000437242 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
HMGB1P31-201ENST00000437242 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
HMGB1P31-201ENST00000437242 ZDHHC16Q969W1 377 aa10.21□□□□□ -0.77
HMGB1P31-201ENST00000437242 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
HMGB1P31-201ENST00000437242 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P31-201ENST00000437242 SLC4A5Q9BY07 1137 aa10.19□□□□□ -0.78
HMGB1P31-201ENST00000437242 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
HMGB1P31-201ENST00000437242 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
HMGB1P31-201ENST00000437242 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P31-201ENST00000437242 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
HMGB1P31-201ENST00000437242 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
HMGB1P31-201ENST00000437242 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P31-201ENST00000437242 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 DPYSL4O14531 572 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 MRPL50Q8N5N7 158 aaKnown RBP10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
HMGB1P31-201ENST00000437242 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P31-201ENST00000437242 PHF14O94880 888 aa10.1□□□□□ -0.79
HMGB1P31-201ENST00000437242 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
HMGB1P31-201ENST00000437242 PTPN5P54829 565 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms