RNA–Protein interactions for RNA: ENST00000436760.1

KPNA3-202, Transcript of karyopherin subunit alpha 3, humanhuman

TSL 2

Gene KPNA3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-202ENST00000436760 RYDENQ9NUL5 291 aaKnown RBP10.82□□□□□ -0.68
KPNA3-202ENST00000436760 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
KPNA3-202ENST00000436760 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
KPNA3-202ENST00000436760 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
KPNA3-202ENST00000436760 KRTAP3-2Q9BYR7 98 aa10.8□□□□□ -0.68
KPNA3-202ENST00000436760 HS3ST6Q96QI5 342 aa10.79□□□□□ -0.68
KPNA3-202ENST00000436760 POTEB3A0JP26 581 aa10.77□□□□□ -0.69
KPNA3-202ENST00000436760 POTEBQ6S5H4 581 aa10.77□□□□□ -0.69
KPNA3-202ENST00000436760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
KPNA3-202ENST00000436760 FAM205CA6NFA0 338 aa10.73□□□□□ -0.69
KPNA3-202ENST00000436760 BCANQ96GW7 911 aa10.72□□□□□ -0.69
KPNA3-202ENST00000436760 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
KPNA3-202ENST00000436760 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
KPNA3-202ENST00000436760 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
KPNA3-202ENST00000436760 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
KPNA3-202ENST00000436760 SOX12O15370 315 aa10.66□□□□□ -0.7
KPNA3-202ENST00000436760 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.7
KPNA3-202ENST00000436760 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
KPNA3-202ENST00000436760 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
KPNA3-202ENST00000436760 DPY19L2Q6NUT2 758 aa10.63□□□□□ -0.71
KPNA3-202ENST00000436760 NLRP6P59044 892 aa10.62□□□□□ -0.71
KPNA3-202ENST00000436760 G3V3G9 751 aa10.61□□□□□ -0.71
KPNA3-202ENST00000436760 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
KPNA3-202ENST00000436760 DOK7Q18PE1 504 aa10.59□□□□□ -0.71
KPNA3-202ENST00000436760 PPP1R37O75864 691 aa10.57□□□□□ -0.72
KPNA3-202ENST00000436760 CADPS2Q86UW7 1296 aa10.57□□□□□ -0.72
KPNA3-202ENST00000436760 ZNF710Q8N1W2 664 aa10.57□□□□□ -0.72
KPNA3-202ENST00000436760 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
KPNA3-202ENST00000436760 ERBB3P21860 1342 aa10.54□□□□□ -0.72
KPNA3-202ENST00000436760 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
KPNA3-202ENST00000436760 RNF166Q96A37 237 aaPredicted RBP10.52□□□□□ -0.73
KPNA3-202ENST00000436760 ZSWIM6Q9HCJ5 1215 aa10.51□□□□□ -0.73
KPNA3-202ENST00000436760 NBR1Q14596 966 aa10.46□□□□□ -0.73
KPNA3-202ENST00000436760 VARS2Q5ST30 1063 aaKnown RBP10.46□□□□□ -0.73
KPNA3-202ENST00000436760 ZNF687Q8N1G0 1237 aa10.45□□□□□ -0.74
KPNA3-202ENST00000436760 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
KPNA3-202ENST00000436760 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
KPNA3-202ENST00000436760 PTGER2P43116 358 aa10.44□□□□□ -0.74
KPNA3-202ENST00000436760 P3H3Q8IVL6 736 aa10.44□□□□□ -0.74
KPNA3-202ENST00000436760 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
KPNA3-202ENST00000436760 GPR153Q6NV75 609 aa10.41□□□□□ -0.74
KPNA3-202ENST00000436760 TMEM92Q6UXU6 159 aa10.41□□□□□ -0.74
KPNA3-202ENST00000436760 NCKAP5LQ9HCH0 1330 aa10.4□□□□□ -0.74
KPNA3-202ENST00000436760 KCNV2Q8TDN2 545 aa10.39□□□□□ -0.75
KPNA3-202ENST00000436760 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
KPNA3-202ENST00000436760 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
KPNA3-202ENST00000436760 PDE4AP27815 886 aa10.37□□□□□ -0.75
KPNA3-202ENST00000436760 MFSD10Q14728 455 aa10.36□□□□□ -0.75
KPNA3-202ENST00000436760 E2F4Q16254 413 aa10.33□□□□□ -0.76
KPNA3-202ENST00000436760 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
KPNA3-202ENST00000436760 LARP6Q9BRS8 491 aaKnown RBP10.33□□□□□ -0.76
KPNA3-202ENST00000436760 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
KPNA3-202ENST00000436760 DDX27Q96GQ7 796 aaKnown RBP10.3□□□□□ -0.76
KPNA3-202ENST00000436760 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-202ENST00000436760 ZNF316A6NFI3 1004 aaPredicted RBP10.27□□□□□ -0.77
KPNA3-202ENST00000436760 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
KPNA3-202ENST00000436760 ARIH1Q9Y4X5 557 aaPredicted RBP10.27□□□□□ -0.77
KPNA3-202ENST00000436760 ARSIQ5FYB1 569 aa10.26□□□□□ -0.77
KPNA3-202ENST00000436760 LSM11P83369 360 aaKnown RBP eCLIP10.25□□□□□ -0.77
KPNA3-202ENST00000436760 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
KPNA3-202ENST00000436760 PBX2P40425 430 aa10.22□□□□□ -0.77
KPNA3-202ENST00000436760 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
KPNA3-202ENST00000436760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
KPNA3-202ENST00000436760 KIF3CO14782 793 aa10.18□□□□□ -0.78
KPNA3-202ENST00000436760 FOXK1P85037 733 aa10.18□□□□□ -0.78
KPNA3-202ENST00000436760 DSG2Q14126 1118 aa10.18□□□□□ -0.78
KPNA3-202ENST00000436760 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
KPNA3-202ENST00000436760 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
KPNA3-202ENST00000436760 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
KPNA3-202ENST00000436760 SEMA3EO15041 775 aa10.16□□□□□ -0.78
KPNA3-202ENST00000436760 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
KPNA3-202ENST00000436760 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
KPNA3-202ENST00000436760 SLC34A2O95436 690 aa10.13□□□□□ -0.79
KPNA3-202ENST00000436760 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
KPNA3-202ENST00000436760 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
KPNA3-202ENST00000436760 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
KPNA3-202ENST00000436760 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
KPNA3-202ENST00000436760 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
KPNA3-202ENST00000436760 HCSTQ9UBK5 93 aa10.11□□□□□ -0.79
KPNA3-202ENST00000436760 NUDT7P0C024 238 aa10.1□□□□□ -0.79
KPNA3-202ENST00000436760 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
KPNA3-202ENST00000436760 DPYSL4O14531 572 aa10.07□□□□□ -0.8
KPNA3-202ENST00000436760 SMYD5Q6GMV2 418 aa10.07□□□□□ -0.8
KPNA3-202ENST00000436760 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
KPNA3-202ENST00000436760 SPDYE16A6NNV3 312 aaPredicted RBP10.06□□□□□ -0.8
KPNA3-202ENST00000436760 PDIA6Q15084 440 aa10.06□□□□□ -0.8
KPNA3-202ENST00000436760 PSDA5PKW4 1024 aaPredicted RBP10.04□□□□□ -0.8
KPNA3-202ENST00000436760 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
KPNA3-202ENST00000436760 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
KPNA3-202ENST00000436760 ARHGAP33O14559 1287 aa10.02□□□□□ -0.81
KPNA3-202ENST00000436760 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.81
KPNA3-202ENST00000436760 TK2O00142 265 aa10.01□□□□□ -0.81
KPNA3-202ENST00000436760 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
KPNA3-202ENST00000436760 OXER1Q8TDS5 423 aa10□□□□□ -0.81
KPNA3-202ENST00000436760 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
KPNA3-202ENST00000436760 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
KPNA3-202ENST00000436760 HRO43593 1189 aa9.97□□□□□ -0.81
KPNA3-202ENST00000436760 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
KPNA3-202ENST00000436760 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
KPNA3-202ENST00000436760 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms